RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-201ENST00000230480 TNS4Q8IZW8 715 aa16.64■□□□□ 0.25
VEGFA-201ENST00000230480 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-201ENST00000230480 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
VEGFA-201ENST00000230480 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 IRF6O14896 467 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 FOXP2O15409 715 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 GLRX3O76003 335 aaKnown RBP16.63■□□□□ 0.25
VEGFA-201ENST00000230480 PLCG2P16885 1265 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 PLCD1P51178 756 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 LBX1P52954 281 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
VEGFA-201ENST00000230480 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
VEGFA-201ENST00000230480 MBD4O95243 580 aa16.62■□□□□ 0.25
VEGFA-201ENST00000230480 CYP2D6P10635 497 aa16.62■□□□□ 0.25
VEGFA-201ENST00000230480 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-201ENST00000230480 GABPAQ06546 454 aa16.62■□□□□ 0.25
VEGFA-201ENST00000230480 STRBPQ96SI9 672 aaKnown RBP16.62■□□□□ 0.25
VEGFA-201ENST00000230480 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-201ENST00000230480 M0R2C6 588 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 RNF113AO15541 343 aaKnown RBP16.61■□□□□ 0.25
VEGFA-201ENST00000230480 TRPA1O75762 1119 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 CAP1Q01518 475 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
VEGFA-201ENST00000230480 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 KCNH4Q9UQ05 1017 aa16.61■□□□□ 0.25
VEGFA-201ENST00000230480 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 PTPRAP18433 802 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 PPIL2Q13356 520 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-201ENST00000230480 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 CFHR5Q9BXR6 569 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
VEGFA-201ENST00000230480 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
VEGFA-201ENST00000230480 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-201ENST00000230480 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
VEGFA-201ENST00000230480 TBC1D8O95759 1140 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 CAP2P40123 477 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 PPATQ06203 517 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
VEGFA-201ENST00000230480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■■■■■ 34.2
VEGFA-201ENST00000230480 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-201ENST00000230480 SAGE1Q9NXZ1 904 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 CSADQ9Y600 493 aa16.59■□□□□ 0.25
VEGFA-201ENST00000230480 ERC2O15083 957 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 GUCY1A2P33402 732 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 SHMT1P34896 483 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-201ENST00000230480 APPBP2Q92624 585 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
VEGFA-201ENST00000230480 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.245e-41■□□□□ 9.6
VEGFA-201ENST00000230480 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
VEGFA-201ENST00000230480 USP5P45974 858 aa16.57■□□□□ 0.24
VEGFA-201ENST00000230480 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
VEGFA-201ENST00000230480 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
VEGFA-201ENST00000230480 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
VEGFA-201ENST00000230480 CRNKL1Q9BZJ0 848 aaKnown RBP16.57■□□□□ 0.24
VEGFA-201ENST00000230480 EHD4Q9H223 541 aa16.57■□□□□ 0.24
VEGFA-201ENST00000230480 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 DGKZQ13574 1117 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 CTR9Q6PD62 1173 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
VEGFA-201ENST00000230480 CCL15-CCL14A0A0B4J2E2 113 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 USP17L21D6R901 530 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 GPAA1O43292 621 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 CA12O43570 354 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 GSPT1P15170 499 aaKnown RBP16.55■□□□□ 0.24
VEGFA-201ENST00000230480 INHBEP58166 350 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 CCL15Q16663 113 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
VEGFA-201ENST00000230480 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 CXCL11O14625 94 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 GDF11O95390 407 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 ZFYP08048 801 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-201ENST00000230480 GTF2A2P52657 109 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 SIAH1Q8IUQ4 282 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms