RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ZMYM1Q5SVZ6 1142 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 TLDC2A0PJX2 215 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 PDE6AP16499 860 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 TNNI2P48788 182 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 GTF2A1P52655 376 aaPredicted RBP15.5■□□□□ 0.07
NFKB1-201ENST00000226574 AMPD3Q01432 767 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 SYNE4Q8N205 404 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 CRACR2BQ8N4Y2 399 aaPredicted RBP15.5■□□□□ 0.07
NFKB1-201ENST00000226574 CSGALNACT2Q8N6G5 542 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 TFCP2L1Q9NZI6 479 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 EBAG9O00559 213 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 PICALMQ13492 652 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 RAB34Q9BZG1 259 aa15.5■□□□□ 0.07
NFKB1-201ENST00000226574 RPAP1Q9BWH6 1393 aaPredicted RBP15.5■□□□□ 0.07
NFKB1-201ENST00000226574 HPDP32754 393 aaPredicted RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 SLC39A14Q15043 492 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 AATFQ9NY61 560 aaKnown RBP eCLIP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 BCAMP50895 628 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 KRT83P78385 493 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 MRPS25P82663 173 aaKnown RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 DYMQ7RTS9 669 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 GREM2Q9H772 168 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 FAM207AQ9NSI2 230 aaPredicted RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 GOLGA6L7A0A1B0GV03 622 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 AP5Z1O43299 807 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 PRKAB2O43741 272 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 PDE4DQ08499 809 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 WWC2Q6AWC2 1192 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 ZNF654Q8IZM8 581 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 NOC4LQ9BVI4 516 aaKnown RBP15.49■□□□□ 0.07
NFKB1-201ENST00000226574 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 MAP3K4Q9Y6R4 1608 aa15.49■□□□□ 0.07
NFKB1-201ENST00000226574 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 BMP15O95972 392 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 IVLP07476 585 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 CASP14P31944 242 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 KIF23Q02241 960 aaPredicted RBP15.48■□□□□ 0.07
NFKB1-201ENST00000226574 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
NFKB1-201ENST00000226574 CTNNBL1Q8WYA6 563 aaPredicted RBP15.48■□□□□ 0.07
NFKB1-201ENST00000226574 USP6P35125 1406 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 PAK1Q13153 545 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 TTC19Q6DKK2 380 aaPredicted RBP15.48■□□□□ 0.07
NFKB1-201ENST00000226574 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
NFKB1-201ENST00000226574 IFNL3Q8IZI9 196 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 ATP10DQ9P241 1426 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 MADDQ8WXG6 1647 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 SPATA5Q8NB90 893 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 EHBP1Q8NDI1 1231 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 RGS22Q8NE09 1264 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 TBC1D7Q9P0N9 293 aa15.48■□□□□ 0.07
NFKB1-201ENST00000226574 ANKRD62A6NC57 917 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 TXKP42681 527 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 SND1Q7KZF4 910 aaKnown RBP eCLIP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 IQGAP3Q86VI3 1631 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 USP17L12C9JPN9 530 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 USP17L21D6R901 530 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 TCIRG1Q13488 830 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 STOX1Q6ZVD7 989 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 TICAM2Q86XR7 235 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 NELFBQ8WX92 580 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 NAA15Q9BXJ9 866 aaKnown RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 HGSO14964 777 aaPredicted RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 FGFR1OPO95684 399 aaKnown RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 FAM114A1Q8IWE2 563 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
NFKB1-201ENST00000226574 GPR161Q8N6U8 529 aaKnown RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 IRX2Q9BZI1 471 aaPredicted RBP15.47■□□□□ 0.07
NFKB1-201ENST00000226574 CEP57Q86XR8 500 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 ZNF287Q9HBT7 754 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 WWC3Q9ULE0 1092 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 GSTTP1A0A1W2PQM5 241 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 TRAF5O00463 557 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 GYG1P46976 350 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 ACRBPQ8NEB7 543 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 GIMAP7Q8NHV1 300 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 AXIN2Q9Y2T1 843 aa15.46■□□□□ 0.07
NFKB1-201ENST00000226574 NLRP1Q9C000 1473 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 A0A1W2PQ27 194 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 A0A1W2PQ64 194 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 A0A1W2PQD8 194 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 FOXN1O15353 648 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms