RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CLPSL2Q6UWE3 100 aa0.96□□□□□ -2.26
CBX3-208ENST00000497498 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
CBX3-208ENST00000497498 NBDYA0A0U1RRE5 68 aa0.95□□□□□ -2.26
CBX3-208ENST00000497498 H3BNG1 76 aa0.95□□□□□ -2.26
CBX3-208ENST00000497498 Q96NJ1 140 aa0.95□□□□□ -2.26
CBX3-208ENST00000497498 RPL37P61927 97 aaKnown RBP0.94□□□□□ -2.26
CBX3-208ENST00000497498 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
CBX3-208ENST00000497498 H1FX-AS1Q4G0G2 97 aa0.93□□□□□ -2.26
CBX3-208ENST00000497498 SPACA4Q8TDM5 124 aa0.93□□□□□ -2.26
CBX3-208ENST00000497498 PLAC4Q8WY50 150 aa0.93□□□□□ -2.26
CBX3-208ENST00000497498 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
CBX3-208ENST00000497498 PRO2289Q9P1D8 64 aa0.93□□□□□ -2.26
CBX3-208ENST00000497498 SPART-AS1P0CW21 52 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 LYNX1P0DP58 116 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 DEFB130BP0DP73 79 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 DEFB130AP0DP74 79 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 C10orf99Q6UWK7 81 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 Q6ZRN7 208 aaPredicted RBP0.92□□□□□ -2.26
CBX3-208ENST00000497498 Q6ZSA8 131 aa0.92□□□□□ -2.26
CBX3-208ENST00000497498 H0YAA0 97 aa0.91□□□□□ -2.26
CBX3-208ENST00000497498 INE1O15225 51 aa0.91□□□□□ -2.26
CBX3-208ENST00000497498 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
CBX3-208ENST00000497498 A0A096LPF7 62 aa0.9□□□□□ -2.27
CBX3-208ENST00000497498 SMR3BP02814 79 aaPredicted RBP0.9□□□□□ -2.27
CBX3-208ENST00000497498 UBE2DNLQ8IWF7 75 aa0.9□□□□□ -2.27
CBX3-208ENST00000497498 PRLHP81277 87 aa0.89□□□□□ -2.27
CBX3-208ENST00000497498 DEFB136Q30KP8 78 aa0.89□□□□□ -2.27
CBX3-208ENST00000497498 APLNQ9ULZ1 77 aa0.88□□□□□ -2.27
CBX3-208ENST00000497498 HTN3P15516 51 aa0.87□□□□□ -2.27
CBX3-208ENST00000497498 KRTAP10-4P60372 401 aaPredicted RBP0.87□□□□□ -2.27
CBX3-208ENST00000497498 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CBX3-208ENST00000497498 SPINK1P00995 79 aa0.86□□□□□ -2.27
CBX3-208ENST00000497498 A0A096LNI7 61 aa0.85□□□□□ -2.27
CBX3-208ENST00000497498 M0QZ58 72 aa0.85□□□□□ -2.27
CBX3-208ENST00000497498 RPS29P62273 56 aaKnown RBP0.85□□□□□ -2.27
CBX3-208ENST00000497498 DEFB135Q30KP9 77 aa0.85□□□□□ -2.27
CBX3-208ENST00000497498 SPINK6Q6UWN8 80 aa0.85□□□□□ -2.27
CBX3-208ENST00000497498 S4R3F8 94 aa0.85□□□□□ -2.27
CBX3-208ENST00000497498 FLGP20930 4061 aaPredicted RBP0.84□□□□□ -2.27
CBX3-208ENST00000497498 KRTAP19-6Q3LI70 58 aa0.83□□□□□ -2.28
CBX3-208ENST00000497498 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
CBX3-208ENST00000497498 A0A0D9SG42 100 aa0.81□□□□□ -2.28
CBX3-208ENST00000497498 MT1HP80294 61 aa0.81□□□□□ -2.28
CBX3-208ENST00000497498 DEFB4AO15263 64 aa0.8□□□□□ -2.28
CBX3-208ENST00000497498 TNP1P09430 55 aa0.77□□□□□ -2.29
CBX3-208ENST00000497498 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
CBX3-208ENST00000497498 SPRR2EP22531 72 aa0.76□□□□□ -2.29
CBX3-208ENST00000497498 SPRR2BP35325 72 aa0.76□□□□□ -2.29
CBX3-208ENST00000497498 SPRR2AP35326 72 aa0.76□□□□□ -2.29
CBX3-208ENST00000497498 KRTAP19-2Q3LHN2 52 aa0.76□□□□□ -2.29
CBX3-208ENST00000497498 M0R2T5 61 aa0.75□□□□□ -2.29
CBX3-208ENST00000497498 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CBX3-208ENST00000497498 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
CBX3-208ENST00000497498 MT2AP02795 61 aa0.66□□□□□ -2.3
CBX3-208ENST00000497498 MT1FP04733 61 aa0.65□□□□□ -2.31
CBX3-208ENST00000497498 MT4P47944 62 aa0.65□□□□□ -2.31
CBX3-208ENST00000497498 KRTAP8-1Q8IUC2 63 aa0.65□□□□□ -2.31
CBX3-208ENST00000497498 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
CBX3-208ENST00000497498 SPRR2GQ9BYE4 73 aa0.58□□□□□ -2.32
CBX3-208ENST00000497498 KRTAP20-2Q3LI61 65 aa0.57□□□□□ -2.32
CBX3-208ENST00000497498 KRTAP19-8Q3LI54 63 aa0.53□□□□□ -2.32
CBX3-208ENST00000497498 MT1AP04731 61 aa0.52□□□□□ -2.33
CBX3-208ENST00000497498 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
CBX3-208ENST00000497498 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CBX3-208ENST00000497498 MT1BP07438 61 aa0.51□□□□□ -2.33
CBX3-208ENST00000497498 MT1EP04732 61 aa0.5□□□□□ -2.33
CBX3-208ENST00000497498 MT1LQ93083 61 aa0.49□□□□□ -2.33
CBX3-208ENST00000497498 PRM1P04553 51 aa0.48□□□□□ -2.33
CBX3-208ENST00000497498 MT1XP80297 61 aa0.48□□□□□ -2.33
CBX3-208ENST00000497498 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
CBX3-208ENST00000497498 MT1GP13640 62 aa0.43□□□□□ -2.34
CBX3-208ENST00000497498 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
CBX3-208ENST00000497498 KRTAP6-2Q3LI66 62 aa0.42□□□□□ -2.34
CBX3-208ENST00000497498 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
CBX3-208ENST00000497498 MT1MQ8N339 61 aa0.41□□□□□ -2.34
CBX3-208ENST00000497498 KRTAP6-1Q3LI64 71 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 60.1 ms