RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.87
HDDC2-205ENST00000608456 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
HDDC2-205ENST00000608456 TGP01266 2768 aa3.37□□□□□ -1.87
HDDC2-205ENST00000608456 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
HDDC2-205ENST00000608456 COL7A1Q02388 2944 aa3.37□□□□□ -1.87
HDDC2-205ENST00000608456 DNAH2Q9P225 4427 aa3.36□□□□□ -1.87
HDDC2-205ENST00000608456 DNAH6Q9C0G6 4158 aa3.36□□□□□ -1.87
HDDC2-205ENST00000608456 MEGF8Q7Z7M0 2845 aa3.35□□□□□ -1.87
HDDC2-205ENST00000608456 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
HDDC2-205ENST00000608456 CSMD3Q7Z407 3707 aa3.34□□□□□ -1.88
HDDC2-205ENST00000608456 PRKDCP78527 4128 aaKnown RBP3.33□□□□□ -1.88
HDDC2-205ENST00000608456 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
HDDC2-205ENST00000608456 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
HDDC2-205ENST00000608456 CRIPTQ9P021 101 aa3.31□□□□□ -1.88
HDDC2-205ENST00000608456 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
HDDC2-205ENST00000608456 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
HDDC2-205ENST00000608456 FBN3Q75N90 2809 aa3.3□□□□□ -1.88
HDDC2-205ENST00000608456 M0QZ58 72 aa3.29□□□□□ -1.88
HDDC2-205ENST00000608456 FRAS1Q86XX4 4008 aa3.29□□□□□ -1.88
HDDC2-205ENST00000608456 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
HDDC2-205ENST00000608456 P0C880 135 aa3.28□□□□□ -1.88
HDDC2-205ENST00000608456 KRTAP10-4P60372 401 aaPredicted RBP3.28□□□□□ -1.88
HDDC2-205ENST00000608456 S4R3F8 94 aa3.28□□□□□ -1.88
HDDC2-205ENST00000608456 STARD9Q9P2P6 4700 aa3.28□□□□□ -1.89
HDDC2-205ENST00000608456 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
HDDC2-205ENST00000608456 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
HDDC2-205ENST00000608456 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
HDDC2-205ENST00000608456 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
HDDC2-205ENST00000608456 KMT2AQ03164 3969 aa3.24□□□□□ -1.89
HDDC2-205ENST00000608456 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
HDDC2-205ENST00000608456 A0A1B0GVY2 172 aa3.23□□□□□ -1.89
HDDC2-205ENST00000608456 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
HDDC2-205ENST00000608456 FLG2Q5D862 2391 aaPredicted RBP3.23□□□□□ -1.89
HDDC2-205ENST00000608456 KRTAP21-3Q3LHN1 58 aa3.21□□□□□ -1.9
HDDC2-205ENST00000608456 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
HDDC2-205ENST00000608456 VPS13BQ7Z7G8 4022 aa3.19□□□□□ -1.9
HDDC2-205ENST00000608456 A0A0D9SG42 100 aa3.19□□□□□ -1.9
HDDC2-205ENST00000608456 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
HDDC2-205ENST00000608456 PKD1P98161 4303 aa3.18□□□□□ -1.9
HDDC2-205ENST00000608456 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
HDDC2-205ENST00000608456 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
HDDC2-205ENST00000608456 DMBT1Q9UGM3 2413 aaPredicted RBP3.17□□□□□ -1.9
HDDC2-205ENST00000608456 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
HDDC2-205ENST00000608456 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
HDDC2-205ENST00000608456 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.91
HDDC2-205ENST00000608456 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
HDDC2-205ENST00000608456 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
HDDC2-205ENST00000608456 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
HDDC2-205ENST00000608456 PKHD1P08F94 4074 aa3.1□□□□□ -1.91
HDDC2-205ENST00000608456 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.91
HDDC2-205ENST00000608456 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
HDDC2-205ENST00000608456 R4GN34 69 aa3.05□□□□□ -1.92
HDDC2-205ENST00000608456 DYNC1H1Q14204 4646 aaKnown RBP3.04□□□□□ -1.92
HDDC2-205ENST00000608456 Q5VSD8 79 aa3.04□□□□□ -1.92
HDDC2-205ENST00000608456 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
HDDC2-205ENST00000608456 FAT3Q8TDW7 4589 aa3.02□□□□□ -1.93
HDDC2-205ENST00000608456 MT3P25713 68 aa3.02□□□□□ -1.93
HDDC2-205ENST00000608456 TNXBP22105 4242 aa3.01□□□□□ -1.93
HDDC2-205ENST00000608456 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
HDDC2-205ENST00000608456 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
HDDC2-205ENST00000608456 FAT1Q14517 4588 aa3□□□□□ -1.93
HDDC2-205ENST00000608456 HSPG2P98160 4391 aa2.96□□□□□ -1.94
HDDC2-205ENST00000608456 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
HDDC2-205ENST00000608456 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
HDDC2-205ENST00000608456 DNHD1Q96M86 4753 aa2.89□□□□□ -1.95
HDDC2-205ENST00000608456 TNP1P09430 55 aa2.89□□□□□ -1.95
HDDC2-205ENST00000608456 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
HDDC2-205ENST00000608456 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
HDDC2-205ENST00000608456 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
HDDC2-205ENST00000608456 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
HDDC2-205ENST00000608456 RYR2Q92736 4967 aa2.76□□□□□ -1.97
HDDC2-205ENST00000608456 INE1O15225 51 aa2.75□□□□□ -1.97
HDDC2-205ENST00000608456 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
HDDC2-205ENST00000608456 LRP2P98164 4655 aa2.75□□□□□ -1.97
HDDC2-205ENST00000608456 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
HDDC2-205ENST00000608456 RYR1P21817 5038 aa2.74□□□□□ -1.97
HDDC2-205ENST00000608456 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
HDDC2-205ENST00000608456 MUC17Q685J3 4493 aa2.69□□□□□ -1.98
HDDC2-205ENST00000608456 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
HDDC2-205ENST00000608456 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
HDDC2-205ENST00000608456 LPAP08519 4548 aa2.66□□□□□ -1.98
HDDC2-205ENST00000608456 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
HDDC2-205ENST00000608456 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
HDDC2-205ENST00000608456 HERC1Q15751 4861 aa2.61□□□□□ -1.99
HDDC2-205ENST00000608456 RYR3Q15413 4870 aa2.61□□□□□ -1.99
HDDC2-205ENST00000608456 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
HDDC2-205ENST00000608456 LCE3AQ5TA76 89 aa2.58□□□□□ -2
HDDC2-205ENST00000608456 KIAA1109Q2LD37 5005 aa2.58□□□□□ -2
HDDC2-205ENST00000608456 KRTAP10-12P60413 245 aa2.55□□□□□ -2
HDDC2-205ENST00000608456 LCE1EQ5T753 118 aa2.54□□□□□ -2
HDDC2-205ENST00000608456 KRTAP12-3P60328 96 aa2.53□□□□□ -2
HDDC2-205ENST00000608456 MT2AP02795 61 aa2.49□□□□□ -2.01
HDDC2-205ENST00000608456 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
HDDC2-205ENST00000608456 M0R2T5 61 aa2.48□□□□□ -2.01
HDDC2-205ENST00000608456 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
HDDC2-205ENST00000608456 KRTAP10-7P60409 375 aaPredicted RBP2.48□□□□□ -2.01
HDDC2-205ENST00000608456 MT1HP80294 61 aa2.48□□□□□ -2.01
HDDC2-205ENST00000608456 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
HDDC2-205ENST00000608456 MT1XP80297 61 aa2.47□□□□□ -2.01
HDDC2-205ENST00000608456 MT1FP04733 61 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms