RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 K7EIL1 84 aa1.84□□□□□ -2.11
CCNT1-203ENST00000550457 SPACA4Q8TDM5 124 aa1.84□□□□□ -2.11
CCNT1-203ENST00000550457 HECTD4Q9Y4D8 3996 aa1.84□□□□□ -2.12
CCNT1-203ENST00000550457 UBE2DNLQ8IWF7 75 aa1.83□□□□□ -2.12
CCNT1-203ENST00000550457 CMYA5Q8N3K9 4069 aa1.82□□□□□ -2.12
CCNT1-203ENST00000550457 A0A1B0GU33 70 aa1.82□□□□□ -2.12
CCNT1-203ENST00000550457 PANO1I0J062 215 aa1.82□□□□□ -2.12
CCNT1-203ENST00000550457 PSORS1C2Q9UIG4 136 aa1.82□□□□□ -2.12
CCNT1-203ENST00000550457 NBDYA0A0U1RRE5 68 aa1.81□□□□□ -2.12
CCNT1-203ENST00000550457 SPINK6Q6UWN8 80 aa1.81□□□□□ -2.12
CCNT1-203ENST00000550457 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
CCNT1-203ENST00000550457 APLNQ9ULZ1 77 aa1.81□□□□□ -2.12
CCNT1-203ENST00000550457 FBN1P35555 2871 aaKnown RBP1.81□□□□□ -2.12
CCNT1-203ENST00000550457 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
CCNT1-203ENST00000550457 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
CCNT1-203ENST00000550457 Q6ZRN7 208 aaPredicted RBP1.8□□□□□ -2.12
CCNT1-203ENST00000550457 Q6ZSA8 131 aa1.8□□□□□ -2.12
CCNT1-203ENST00000550457 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
CCNT1-203ENST00000550457 STAB1Q9NY15 2570 aa1.8□□□□□ -2.12
CCNT1-203ENST00000550457 NUPR2A6NF83 97 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 H0YAA0 97 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 J3QKU1 62 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 SMR3AQ99954 134 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
CCNT1-203ENST00000550457 DNAH10Q8IVF4 4471 aa1.78□□□□□ -2.12
CCNT1-203ENST00000550457 A0A087WTM6 91 aa1.78□□□□□ -2.12
CCNT1-203ENST00000550457 RPS29P62273 56 aaKnown RBP1.78□□□□□ -2.12
CCNT1-203ENST00000550457 MGAM2Q2M2H8 2515 aa1.78□□□□□ -2.12
CCNT1-203ENST00000550457 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
CCNT1-203ENST00000550457 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
CCNT1-203ENST00000550457 TGP01266 2768 aa1.77□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH8Q96JB1 4490 aa1.77□□□□□ -2.13
CCNT1-203ENST00000550457 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
CCNT1-203ENST00000550457 SPINK1P00995 79 aa1.76□□□□□ -2.13
CCNT1-203ENST00000550457 VPS13DQ5THJ4 4388 aa1.76□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH6Q9C0G6 4158 aa1.76□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH17Q9UFH2 4485 aa1.76□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH7Q8WXX0 4024 aa1.75□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
CCNT1-203ENST00000550457 P0C880 135 aa1.75□□□□□ -2.13
CCNT1-203ENST00000550457 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
CCNT1-203ENST00000550457 SPINT4Q6UDR6 99 aa1.74□□□□□ -2.13
CCNT1-203ENST00000550457 PRKDCP78527 4128 aaKnown RBP1.73□□□□□ -2.13
CCNT1-203ENST00000550457 KRTAP13-2Q52LG2 175 aa1.73□□□□□ -2.13
CCNT1-203ENST00000550457 C20orf166-AS1Q96NR2 134 aa1.73□□□□□ -2.13
CCNT1-203ENST00000550457 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
CCNT1-203ENST00000550457 PLECQ15149 4684 aaKnown RBP1.72□□□□□ -2.13
CCNT1-203ENST00000550457 FRAS1Q86XX4 4008 aa1.72□□□□□ -2.13
CCNT1-203ENST00000550457 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
CCNT1-203ENST00000550457 CSMD3Q7Z407 3707 aa1.7□□□□□ -2.14
CCNT1-203ENST00000550457 FLG2Q5D862 2391 aaPredicted RBP1.69□□□□□ -2.14
CCNT1-203ENST00000550457 TPRXLQ17RH7 258 aa1.69□□□□□ -2.14
CCNT1-203ENST00000550457 DNAH11Q96DT5 4516 aa1.69□□□□□ -2.14
CCNT1-203ENST00000550457 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
CCNT1-203ENST00000550457 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
CCNT1-203ENST00000550457 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
CCNT1-203ENST00000550457 M0QZ58 72 aa1.65□□□□□ -2.15
CCNT1-203ENST00000550457 S4R3F8 94 aa1.65□□□□□ -2.15
CCNT1-203ENST00000550457 DNAH5Q8TE73 4624 aa1.65□□□□□ -2.15
CCNT1-203ENST00000550457 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
CCNT1-203ENST00000550457 LRP1BQ9NZR2 4599 aa1.64□□□□□ -2.15
CCNT1-203ENST00000550457 PKHD1L1Q86WI1 4243 aa1.64□□□□□ -2.15
CCNT1-203ENST00000550457 LUZP6Q538Z0 58 aa1.64□□□□□ -2.15
CCNT1-203ENST00000550457 A0A0D9SG42 100 aa1.63□□□□□ -2.15
CCNT1-203ENST00000550457 KMT2AQ03164 3969 aa1.63□□□□□ -2.15
CCNT1-203ENST00000550457 STARD9Q9P2P6 4700 aa1.62□□□□□ -2.15
CCNT1-203ENST00000550457 PKD1P98161 4303 aa1.62□□□□□ -2.15
CCNT1-203ENST00000550457 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
CCNT1-203ENST00000550457 PKHD1P08F94 4074 aa1.61□□□□□ -2.15
CCNT1-203ENST00000550457 C9orf92A6NGG3 77 aa1.61□□□□□ -2.15
CCNT1-203ENST00000550457 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
CCNT1-203ENST00000550457 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CCNT1-203ENST00000550457 DMBT1Q9UGM3 2413 aaPredicted RBP1.6□□□□□ -2.15
CCNT1-203ENST00000550457 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
CCNT1-203ENST00000550457 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.15
CCNT1-203ENST00000550457 APOBP04114 4563 aaKnown RBP1.58□□□□□ -2.16
CCNT1-203ENST00000550457 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
CCNT1-203ENST00000550457 CAMK2N1Q7Z7J9 78 aa1.56□□□□□ -2.16
CCNT1-203ENST00000550457 TNXBP22105 4242 aa1.55□□□□□ -2.16
CCNT1-203ENST00000550457 HSPG2P98160 4391 aa1.55□□□□□ -2.16
CCNT1-203ENST00000550457 LRP1Q07954 4544 aaKnown RBP1.54□□□□□ -2.16
CCNT1-203ENST00000550457 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
CCNT1-203ENST00000550457 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
CCNT1-203ENST00000550457 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
CCNT1-203ENST00000550457 R4GN34 69 aa1.52□□□□□ -2.17
CCNT1-203ENST00000550457 FAT1Q14517 4588 aa1.52□□□□□ -2.17
CCNT1-203ENST00000550457 SPRR5A0A1B0GTR4 108 aa1.49□□□□□ -2.17
CCNT1-203ENST00000550457 INE1O15225 51 aa1.48□□□□□ -2.17
CCNT1-203ENST00000550457 SMR3BP02814 79 aaPredicted RBP1.48□□□□□ -2.17
CCNT1-203ENST00000550457 PRO2289Q9P1D8 64 aa1.48□□□□□ -2.17
CCNT1-203ENST00000550457 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
CCNT1-203ENST00000550457 TNP1P09430 55 aa1.46□□□□□ -2.18
CCNT1-203ENST00000550457 HYDINQ4G0P3 5121 aa1.44□□□□□ -2.18
CCNT1-203ENST00000550457 Q5VSD8 79 aa1.44□□□□□ -2.18
CCNT1-203ENST00000550457 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
CCNT1-203ENST00000550457 DNHD1Q96M86 4753 aa1.43□□□□□ -2.18
CCNT1-203ENST00000550457 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
CCNT1-203ENST00000550457 RYR2Q92736 4967 aa1.38□□□□□ -2.19
CCNT1-203ENST00000550457 MT1HL1P0DM35 61 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms