RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SPATA45Q537H7 98 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 CENPWQ5EE01 88 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 GTF2H5Q6ZYL4 71 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 ERASQ7Z444 233 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATOH7Q8N100 152 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 OR13C6PQ8NH95 151 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 OCC1Q8TAD7 63 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 PMCHL2Q9BQD1 86 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 SMIM3Q9BZL3 60 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 MAP1LC3BQ9GZQ8 125 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 MANBALQ9NQG1 85 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 SPANXCQ9NY87 97 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 NAT8BQ9UHF3 227 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 SPCS1Q9Y6A9 102 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRBV7-6A0A0J9YX20 115 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 FAM240AA0A1B0GVK7 77 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 A0A1B0GXF2 115 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 SMIM27A0A1W2PRY6 76 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 A6NDN8 102 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 C9JAW5 83 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 H3BMG7 143 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 SYS1-DBNDD2H3BUS1 97 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 H3BUT2 72 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 J3KT08 172 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 K7EN84 100 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 FABP2P12104 132 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 KRTDAPP60985 99 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 ETDBQ3ZM63 59 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 ORMDL2Q53FV1 153 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 LINC01545Q5VT33 79 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 FAM104BQ5XKR9 115 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 BAGE3Q86Y29 109 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 FAM213BQ8TBF2 198 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 PPDPFLQ8WWR9 84 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 PRELID3AQ96N28 172 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 SMIM7Q9BQ49 75 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 NAA38Q9BRA0 125 aaKnown RBP0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 ANAPC13Q9BS18 74 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 MAP1LC3AQ9H492 121 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 HIGD1BQ9P298 99 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 GNG13Q9P2W3 67 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 PRO0628Q9UI54 55 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRAPPC1Q9Y5R8 145 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 V9GYV3 84 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
TRAV1-1-201ENST00000542354 LOC110117498A0A087WWA1 95 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 A0A1B0GV50 99 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 J3QQQ9 107 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 K7ERJ3 54 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 UQCRQO14949 82 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 NDUFC1O43677 76 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 HSBP1O75506 76 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 NPYP01303 97 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 IFITM1P13164 125 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 FXYD2P54710 66 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 TMEM258P61165 79 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 HIST1H4AP62805 103 aaKnown RBP0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATP5L2Q7Z4Y8 100 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 SCGB3A1Q96QR1 104 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 OSTCQ9NRP0 149 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 V9GYY9 64 aa0.38□□□□□ -2.35
TRAV1-1-201ENST00000542354 SMIM26A0A096LP01 95 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 MYMXA0A1B0GTQ4 84 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 HIGD1CA8MV81 97 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 HCG22E2RYF7 251 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 H3BT86 120 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 H7BZZ5 65 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 K7EMI3 77 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATOX1O00244 68 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 SNCGO76070 127 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 DPM2O94777 84 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 LEPROTL1O95214 131 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 IGKCP01834 107 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 SCGB1C2P0DMR2 95 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 COX7CP15954 63 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 KRTAP12-1P59990 96 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 LINC00643Q86TS7 51 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 ANKRD29Q8N6D5 301 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 SERP2Q8N6R1 65 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 Q8N8P6 123 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 IFI27L1Q96BM0 104 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 SERP1Q9Y6X1 66 aa0.37□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRAV12-1A0A0B4J245 112 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 A0A0B4J2C4 111 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 hADV29S1A0JD25 119 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 LINC01549A6NIU2 74 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRACP01848 142 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 HBDP02042 147 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 CCKP06307 115 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 ACYP1P07311 99 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 ZNF22P17026 224 aaPredicted RBP0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 PLNP26678 52 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 PSMB2P49721 201 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 NPC2P61916 151 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 PMAIP1Q13794 54 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 TMEM170BQ5T4T1 132 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 LINC00575Q6W349 94 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 MUSTN1Q8IVN3 82 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms