RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 APELAP0DMC3 54 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 IGLC3P0DOY3 106 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 CRIP1P50238 77 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 KLK9Q2XQG4 91 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 TDRG1Q3Y452 100 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 USMG5Q96IX5 58 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 LYSTQ99698 3801 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 SMR3AQ99954 134 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
SQLE-204ENST00000520493 TRAV21A0A0B4J279 112 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 LINC01546A6NGU7 62 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 LINC01549A6NIU2 74 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 D6R8Y8 96 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 H3BUA1 57 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 K7EMI3 77 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 NDUFA4O00483 81 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 ARMS2P0C7Q2 107 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 COX8AP10176 69 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 FCER1GP30273 86 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 IFI27P40305 119 aaPredicted RBP0.85□□□□□ -2.27
SQLE-204ENST00000520493 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 C20orf78Q9BR46 151 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 PLCE1Q9P212 2302 aa0.85□□□□□ -2.27
SQLE-204ENST00000520493 TIMM8BQ9Y5J9 83 aaPredicted RBP0.85□□□□□ -2.27
SQLE-204ENST00000520493 HRNRQ86YZ3 2850 aaPredicted RBP0.84□□□□□ -2.27
SQLE-204ENST00000520493 TNCP24821 2201 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 H3BUX3 64 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 SMIM13P0DJ93 91 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 PLNP26678 52 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 BVES-AS1Q5T3Y7 98 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
SQLE-204ENST00000520493 PKDREJQ9NTG1 2253 aa0.84□□□□□ -2.28
SQLE-204ENST00000520493 ACACAQ13085 2346 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 MYMXA0A1B0GTQ4 84 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 H3BUT2 72 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 H3BVH4 76 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 K7EP34 96 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 BCE1O60756 84 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 COX6B1P14854 86 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 SMIM2Q9BVW6 85 aa0.83□□□□□ -2.28
SQLE-204ENST00000520493 IGIPA6NJ69 53 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 I3L3M4 83 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 M0QY20 66 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 POLR2KP53803 58 aaKnown RBP0.82□□□□□ -2.28
SQLE-204ENST00000520493 DEFB112Q30KQ8 113 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 SPCS1Q9Y6A9 102 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 PKHD1L1Q86WI1 4243 aa0.82□□□□□ -2.28
SQLE-204ENST00000520493 HUWE1Q7Z6Z7 4374 aaKnown RBP0.81□□□□□ -2.28
SQLE-204ENST00000520493 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 A8MTW9 85 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 HTN1P15515 57 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 DEFB131AP59861 70 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 DEFB1P60022 68 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 WFDC2Q14508 124 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 DEFB114Q30KQ6 69 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 MUSTN1Q8IVN3 82 aa0.81□□□□□ -2.28
SQLE-204ENST00000520493 RPL39LQ96EH5 51 aaKnown RBP0.81□□□□□ -2.28
SQLE-204ENST00000520493 A0A087WVE0 104 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 RPL39P62891 51 aaKnown RBP0.8□□□□□ -2.28
SQLE-204ENST00000520493 ATXN8Q156A1 80 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 ETDBQ3ZM63 59 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 LINC01600Q96MT4 127 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 UBE2D4Q9Y2X8 147 aa0.8□□□□□ -2.28
SQLE-204ENST00000520493 APOBP04114 4563 aaKnown RBP0.79□□□□□ -2.28
SQLE-204ENST00000520493 H0YGX0 51 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 NDUFA1O15239 70 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 ACYP1P07311 99 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 DEFB136Q30KP8 78 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 LINC00308Q8TCZ7 52 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 DEFB104AQ8WTQ1 72 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 NOP10Q9NPE3 64 aaKnown RBP0.79□□□□□ -2.28
SQLE-204ENST00000520493 CDKN2A-AS1Q9UH64 79 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
SQLE-204ENST00000520493 AKAP6Q13023 2319 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 DEFB130BP0DP73 79 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 DEFB130AP0DP74 79 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 LINC00158P58513 81 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 DEFB121Q5J5C9 76 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 TP53AIP1Q9HCN2 124 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
SQLE-204ENST00000520493 LINC00959A0A1B0GUT2 108 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 SPART-AS1P0CW21 52 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 LINC00643Q86TS7 51 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 Q8IZM0 81 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 WFDC9Q8NEX5 89 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 TOMM7Q9P0U1 55 aa0.77□□□□□ -2.29
SQLE-204ENST00000520493 F8WEM9 126 aa0.76□□□□□ -2.29
SQLE-204ENST00000520493 H3BNG1 76 aa0.76□□□□□ -2.29
SQLE-204ENST00000520493 A0A096LPF7 62 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 TRBV7-4A0A0J9YYF1 115 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 H0Y9P7 68 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 DEFB4AO15263 64 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 HTN3P15516 51 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 COX7BP24311 80 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 DEFB135Q30KP9 77 aa0.75□□□□□ -2.29
SQLE-204ENST00000520493 ATP5EP2Q5VTU8 51 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms