RNA–Protein interactions for RNA: ENST00000504624.1

PDE4D-211, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-211ENST00000504624 SRRM2Q9UQ35 2752 aaKnown RBP0.84□□□□□ -2.28
PDE4D-211ENST00000504624 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 FCGBPQ9Y6R7 5405 aaPredicted RBP0.83□□□□□ -2.28
PDE4D-211ENST00000504624 SVEP1Q4LDE5 3571 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 MAST4O15021 2626 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 A0A087WTM6 91 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB130BP0DP73 79 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB130AP0DP74 79 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB136Q30KP8 78 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 KRTAP21-3Q3LHN1 58 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB124Q8NES8 71 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB105AQ8NG35 78 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 TGP01266 2768 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 LYSTQ99698 3801 aa0.83□□□□□ -2.28
PDE4D-211ENST00000504624 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 DNAH1Q9P2D7 4330 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 DNAH3Q8TD57 4116 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
PDE4D-211ENST00000504624 HECTD4Q9Y4D8 3996 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 IGSF10Q6WRI0 2623 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 H0YAA0 97 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 Q96NJ1 140 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 CMYA5Q8N3K9 4069 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 CUBNO60494 3623 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 STAB2Q8WWQ8 2551 aa0.82□□□□□ -2.28
PDE4D-211ENST00000504624 VPS13DQ5THJ4 4388 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 CSMD3Q7Z407 3707 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 A0A096LPF7 62 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 A0A0G2JQZ4 141 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 NBDYA0A0U1RRE5 68 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 PRLHP81277 87 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 DEFB135Q30KP9 77 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 FBN3Q75N90 2809 aa0.81□□□□□ -2.28
PDE4D-211ENST00000504624 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
PDE4D-211ENST00000504624 H1FX-AS1Q4G0G2 97 aa0.8□□□□□ -2.28
PDE4D-211ENST00000504624 C10orf99Q6UWK7 81 aa0.8□□□□□ -2.28
PDE4D-211ENST00000504624 SSBP3-AS1Q7Z2R9 100 aa0.8□□□□□ -2.28
PDE4D-211ENST00000504624 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
PDE4D-211ENST00000504624 FLNBO75369 2602 aaKnown RBP0.8□□□□□ -2.28
PDE4D-211ENST00000504624 ACANP16112 2415 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 HUWE1Q7Z6Z7 4374 aaKnown RBP0.79□□□□□ -2.28
PDE4D-211ENST00000504624 A0A096LNI7 61 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 HTN3P15516 51 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 RPL37P61927 97 aaKnown RBP0.79□□□□□ -2.28
PDE4D-211ENST00000504624 CRIPTQ9P021 101 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 KMT2AQ03164 3969 aa0.79□□□□□ -2.28
PDE4D-211ENST00000504624 STAB1Q9NY15 2570 aa0.78□□□□□ -2.28
PDE4D-211ENST00000504624 K7EIL1 84 aa0.78□□□□□ -2.28
PDE4D-211ENST00000504624 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
PDE4D-211ENST00000504624 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
PDE4D-211ENST00000504624 RPS29P62273 56 aaKnown RBP0.77□□□□□ -2.29
PDE4D-211ENST00000504624 Q6ZSA8 131 aa0.77□□□□□ -2.29
PDE4D-211ENST00000504624 SPACA4Q8TDM5 124 aa0.77□□□□□ -2.29
PDE4D-211ENST00000504624 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
PDE4D-211ENST00000504624 DNAH17Q9UFH2 4485 aa0.77□□□□□ -2.29
PDE4D-211ENST00000504624 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 UBE2DNLQ8IWF7 75 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 PRO2289Q9P1D8 64 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 DNAH9Q9NYC9 4486 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 DNAH2Q9P225 4427 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 FLG2Q5D862 2391 aaPredicted RBP0.76□□□□□ -2.29
PDE4D-211ENST00000504624 DNAH8Q96JB1 4490 aa0.76□□□□□ -2.29
PDE4D-211ENST00000504624 VPS13BQ7Z7G8 4022 aa0.75□□□□□ -2.29
PDE4D-211ENST00000504624 DEFB123Q8N688 67 aa0.75□□□□□ -2.29
PDE4D-211ENST00000504624 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
PDE4D-211ENST00000504624 INE1O15225 51 aa0.74□□□□□ -2.29
PDE4D-211ENST00000504624 DEFB4AO15263 64 aa0.74□□□□□ -2.29
PDE4D-211ENST00000504624 SPINK1P00995 79 aa0.74□□□□□ -2.29
PDE4D-211ENST00000504624 PKHD1P08F94 4074 aa0.74□□□□□ -2.29
PDE4D-211ENST00000504624 DMBT1Q9UGM3 2413 aaPredicted RBP0.74□□□□□ -2.29
PDE4D-211ENST00000504624 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 TPRXLQ17RH7 258 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 Q6ZRN7 208 aaPredicted RBP0.73□□□□□ -2.29
PDE4D-211ENST00000504624 PLAC4Q8WY50 150 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 S4R3F8 94 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 STARD9Q9P2P6 4700 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 TNXBP22105 4242 aa0.73□□□□□ -2.29
PDE4D-211ENST00000504624 PLECQ15149 4684 aaKnown RBP0.71□□□□□ -2.3
PDE4D-211ENST00000504624 DNAH5Q8TE73 4624 aa0.71□□□□□ -2.3
PDE4D-211ENST00000504624 M0QZ58 72 aa0.71□□□□□ -2.3
PDE4D-211ENST00000504624 Q5VSD8 79 aa0.71□□□□□ -2.3
PDE4D-211ENST00000504624 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
PDE4D-211ENST00000504624 A0A0D9SG42 100 aa0.7□□□□□ -2.3
PDE4D-211ENST00000504624 APLNQ9ULZ1 77 aa0.7□□□□□ -2.3
PDE4D-211ENST00000504624 APOBP04114 4563 aaKnown RBP0.7□□□□□ -2.3
PDE4D-211ENST00000504624 PKD1P98161 4303 aa0.7□□□□□ -2.3
PDE4D-211ENST00000504624 SACSQ9NZJ4 4579 aa0.68□□□□□ -2.3
PDE4D-211ENST00000504624 HSPG2P98160 4391 aa0.68□□□□□ -2.3
PDE4D-211ENST00000504624 FAT2Q9NYQ8 4349 aa0.68□□□□□ -2.3
PDE4D-211ENST00000504624 C9orf92A6NGG3 77 aa0.66□□□□□ -2.3
PDE4D-211ENST00000504624 TNP1P09430 55 aa0.66□□□□□ -2.3
PDE4D-211ENST00000504624 DYNC1H1Q14204 4646 aaKnown RBP0.65□□□□□ -2.31
PDE4D-211ENST00000504624 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.31
PDE4D-211ENST00000504624 FAT1Q14517 4588 aa0.64□□□□□ -2.31
PDE4D-211ENST00000504624 SMR3AQ99954 134 aa0.64□□□□□ -2.31
PDE4D-211ENST00000504624 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
PDE4D-211ENST00000504624 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms