RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
LSM6-204ENST00000504181 H0YAA0 97 aa4.74□□□□□ -1.65
LSM6-204ENST00000504181 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
LSM6-204ENST00000504181 CEND1Q8N111 149 aa4.73□□□□□ -1.65
LSM6-204ENST00000504181 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
LSM6-204ENST00000504181 PSMB2P49721 201 aa4.69□□□□□ -1.66
LSM6-204ENST00000504181 NREPQ16612 68 aa4.68□□□□□ -1.66
LSM6-204ENST00000504181 MT1EP04732 61 aa4.67□□□□□ -1.66
LSM6-204ENST00000504181 CXCL6P80162 114 aa4.67□□□□□ -1.66
LSM6-204ENST00000504181 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
LSM6-204ENST00000504181 COA6Q5JTJ3 125 aaKnown RBP4.67□□□□□ -1.66
LSM6-204ENST00000504181 R4GN34 69 aa4.67□□□□□ -1.66
LSM6-204ENST00000504181 A0A1B0GW54 56 aa4.66□□□□□ -1.66
LSM6-204ENST00000504181 COX8AP10176 69 aa4.66□□□□□ -1.66
LSM6-204ENST00000504181 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
LSM6-204ENST00000504181 COX6CP09669 75 aa4.63□□□□□ -1.67
LSM6-204ENST00000504181 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
LSM6-204ENST00000504181 HIST3H2BBQ8N257 126 aa4.62□□□□□ -1.67
LSM6-204ENST00000504181 M0QZ58 72 aa4.61□□□□□ -1.67
LSM6-204ENST00000504181 FXYD2P54710 66 aa4.61□□□□□ -1.67
LSM6-204ENST00000504181 LOC110117498A0A087WWA1 95 aa4.6□□□□□ -1.67
LSM6-204ENST00000504181 DLEU1O43261 78 aa4.6□□□□□ -1.67
LSM6-204ENST00000504181 NDUFC1O43677 76 aa4.6□□□□□ -1.67
LSM6-204ENST00000504181 BAALC-AS2P0C853 105 aa4.6□□□□□ -1.67
LSM6-204ENST00000504181 HIGD1BQ9P298 99 aa4.6□□□□□ -1.67
LSM6-204ENST00000504181 PAM16Q9Y3D7 125 aa4.59□□□□□ -1.67
LSM6-204ENST00000504181 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
LSM6-204ENST00000504181 C14orf144Q96I85 54 aa4.58□□□□□ -1.68
LSM6-204ENST00000504181 MT1GP13640 62 aa4.57□□□□□ -1.68
LSM6-204ENST00000504181 Q8N9L7 120 aa4.57□□□□□ -1.68
LSM6-204ENST00000504181 K7ERJ3 54 aa4.56□□□□□ -1.68
LSM6-204ENST00000504181 C14orf132Q9NPU4 83 aa4.55□□□□□ -1.68
LSM6-204ENST00000504181 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
LSM6-204ENST00000504181 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
LSM6-204ENST00000504181 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
LSM6-204ENST00000504181 P0C880 135 aa4.53□□□□□ -1.68
LSM6-204ENST00000504181 HIST1H2BLQ99880 126 aa4.53□□□□□ -1.68
LSM6-204ENST00000504181 BPY2O14599 106 aa4.52□□□□□ -1.69
LSM6-204ENST00000504181 MT1MQ8N339 61 aa4.51□□□□□ -1.69
LSM6-204ENST00000504181 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
LSM6-204ENST00000504181 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
LSM6-204ENST00000504181 K7EP34 96 aa4.48□□□□□ -1.69
LSM6-204ENST00000504181 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
LSM6-204ENST00000504181 S100A2P29034 98 aa4.45□□□□□ -1.7
LSM6-204ENST00000504181 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
LSM6-204ENST00000504181 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
LSM6-204ENST00000504181 SPATA45Q537H7 98 aa4.43□□□□□ -1.7
LSM6-204ENST00000504181 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
LSM6-204ENST00000504181 BATFQ16520 125 aa4.4□□□□□ -1.71
LSM6-204ENST00000504181 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
LSM6-204ENST00000504181 ATXN8Q156A1 80 aa4.38□□□□□ -1.71
LSM6-204ENST00000504181 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
LSM6-204ENST00000504181 NAA38Q9BRA0 125 aaKnown RBP4.36□□□□□ -1.71
LSM6-204ENST00000504181 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
LSM6-204ENST00000504181 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
LSM6-204ENST00000504181 HSD52Q0P140 79 aa4.34□□□□□ -1.71
LSM6-204ENST00000504181 MT1LQ93083 61 aa4.34□□□□□ -1.71
LSM6-204ENST00000504181 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
LSM6-204ENST00000504181 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
LSM6-204ENST00000504181 ACYP1P07311 99 aa4.32□□□□□ -1.72
LSM6-204ENST00000504181 A0A1W2PPM0 123 aa4.31□□□□□ -1.72
LSM6-204ENST00000504181 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
LSM6-204ENST00000504181 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
LSM6-204ENST00000504181 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
LSM6-204ENST00000504181 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
LSM6-204ENST00000504181 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
LSM6-204ENST00000504181 MT3P25713 68 aa4.22□□□□□ -1.73
LSM6-204ENST00000504181 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
LSM6-204ENST00000504181 A0A0D9SG42 100 aa4.21□□□□□ -1.74
LSM6-204ENST00000504181 S100A6P06703 90 aa4.2□□□□□ -1.74
LSM6-204ENST00000504181 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
LSM6-204ENST00000504181 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
LSM6-204ENST00000504181 S100A1P23297 94 aa4.17□□□□□ -1.74
LSM6-204ENST00000504181 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
LSM6-204ENST00000504181 TSTD3H0UI37 97 aa4.12□□□□□ -1.75
LSM6-204ENST00000504181 SPCS1Q9Y6A9 102 aa4.11□□□□□ -1.75
LSM6-204ENST00000504181 UBL5Q9BZL1 73 aa4.09□□□□□ -1.75
LSM6-204ENST00000504181 H0Y9P7 68 aa4.05□□□□□ -1.76
LSM6-204ENST00000504181 H3BT86 120 aa4.04□□□□□ -1.76
LSM6-204ENST00000504181 PCP4P48539 62 aa4.02□□□□□ -1.77
LSM6-204ENST00000504181 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
LSM6-204ENST00000504181 UQCR10Q9UDW1 63 aa4.01□□□□□ -1.77
LSM6-204ENST00000504181 ATOX1O00244 68 aa4□□□□□ -1.77
LSM6-204ENST00000504181 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
LSM6-204ENST00000504181 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
LSM6-204ENST00000504181 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
LSM6-204ENST00000504181 UQCRQO14949 82 aa3.94□□□□□ -1.78
LSM6-204ENST00000504181 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
LSM6-204ENST00000504181 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
LSM6-204ENST00000504181 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
LSM6-204ENST00000504181 PYY3Q5JQD4 70 aa3.9□□□□□ -1.79
LSM6-204ENST00000504181 DMAC1Q96GE9 116 aa3.88□□□□□ -1.79
LSM6-204ENST00000504181 M0R143 59 aa3.86□□□□□ -1.79
LSM6-204ENST00000504181 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
LSM6-204ENST00000504181 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
LSM6-204ENST00000504181 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
LSM6-204ENST00000504181 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
LSM6-204ENST00000504181 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
LSM6-204ENST00000504181 MP68P56378 58 aa3.73□□□□□ -1.81
LSM6-204ENST00000504181 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms