RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 WFDC13Q8IUB5 93 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 DEFB105AQ8NG35 78 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 ZNF462Q96JM2 2506 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 GCN1Q92616 2671 aaKnown RBP0.94□□□□□ -2.26
EPB41-212ENST00000490308 DYNC2H1Q8NCM8 4307 aaKnown RBP0.94□□□□□ -2.26
EPB41-212ENST00000490308 CREBBPQ92793 2442 aa0.94□□□□□ -2.26
EPB41-212ENST00000490308 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 ABCA12Q86UK0 2595 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 SETD2Q9BYW2 2564 aaPredicted RBP0.93□□□□□ -2.26
EPB41-212ENST00000490308 ACANP16112 2415 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 A0A096LNI7 61 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 PRLHP81277 87 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 VWFP04275 2813 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 PKD1L1Q8TDX9 2849 aa0.93□□□□□ -2.26
EPB41-212ENST00000490308 TRRAPQ9Y4A5 3859 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 H3BNG1 76 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 SPART-AS1P0CW21 52 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 SPRR1BP22528 89 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 KRTAP10-4P60372 401 aaPredicted RBP0.92□□□□□ -2.26
EPB41-212ENST00000490308 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 MYO9AB2RTY4 2548 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 TENM1Q9UKZ4 2725 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 NF1P21359 2839 aa0.92□□□□□ -2.26
EPB41-212ENST00000490308 NIPBLQ6KC79 2804 aaeCLIP0.92□□□□□ -2.26
EPB41-212ENST00000490308 TENM4Q6N022 2769 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 SACSQ9NZJ4 4579 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 DNAH11Q96DT5 4516 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 VPS13DQ5THJ4 4388 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 UNC79Q9P2D8 2635 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 MYO18BQ8IUG5 2567 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 DNAH7Q8WXX0 4024 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 PLECQ15149 4684 aaKnown RBP0.91□□□□□ -2.26
EPB41-212ENST00000490308 NBEAL2Q6ZNJ1 2754 aa0.91□□□□□ -2.26
EPB41-212ENST00000490308 LYSTQ99698 3801 aa0.9□□□□□ -2.26
EPB41-212ENST00000490308 PRKDCP78527 4128 aaKnown RBP0.9□□□□□ -2.26
EPB41-212ENST00000490308 OTOGQ6ZRI0 2925 aa0.9□□□□□ -2.26
EPB41-212ENST00000490308 F8P00451 2351 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 MTORP42345 2549 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 DNAH5Q8TE73 4624 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 CENPEQ02224 2701 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 CSMD3Q7Z407 3707 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.27
EPB41-212ENST00000490308 HELZ2Q9BYK8 2649 aaKnown RBP0.89□□□□□ -2.27
EPB41-212ENST00000490308 NSD1Q96L73 2696 aaPredicted RBP0.89□□□□□ -2.27
EPB41-212ENST00000490308 ACACBO00763 2458 aa0.89□□□□□ -2.27
EPB41-212ENST00000490308 APLNQ9ULZ1 77 aa0.89□□□□□ -2.27
EPB41-212ENST00000490308 FBN3Q75N90 2809 aa0.89□□□□□ -2.27
EPB41-212ENST00000490308 TEP1Q99973 2627 aaKnown RBP0.89□□□□□ -2.27
EPB41-212ENST00000490308 DNAH2Q9P225 4427 aa0.88□□□□□ -2.27
EPB41-212ENST00000490308 FASNP49327 2511 aaKnown RBP0.88□□□□□ -2.27
EPB41-212ENST00000490308 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
EPB41-212ENST00000490308 HECTD1Q9ULT8 2610 aa0.87□□□□□ -2.27
EPB41-212ENST00000490308 FLNBO75369 2602 aaKnown RBP0.87□□□□□ -2.27
EPB41-212ENST00000490308 HECTD4Q9Y4D8 3996 aa0.87□□□□□ -2.27
EPB41-212ENST00000490308 MAST4O15021 2626 aa0.86□□□□□ -2.27
EPB41-212ENST00000490308 DNAH6Q9C0G6 4158 aa0.86□□□□□ -2.27
EPB41-212ENST00000490308 SRRM2Q9UQ35 2752 aaKnown RBP0.86□□□□□ -2.27
EPB41-212ENST00000490308 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
EPB41-212ENST00000490308 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
EPB41-212ENST00000490308 HYDINQ4G0P3 5121 aa0.86□□□□□ -2.27
EPB41-212ENST00000490308 PKD1P98161 4303 aa0.85□□□□□ -2.27
EPB41-212ENST00000490308 ATRQ13535 2644 aa0.85□□□□□ -2.27
EPB41-212ENST00000490308 COL7A1Q02388 2944 aa0.85□□□□□ -2.27
EPB41-212ENST00000490308 H1FX-AS1Q4G0G2 97 aa0.85□□□□□ -2.27
EPB41-212ENST00000490308 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
EPB41-212ENST00000490308 KMT2AQ03164 3969 aa0.84□□□□□ -2.27
EPB41-212ENST00000490308 H0YAA0 97 aa0.84□□□□□ -2.27
EPB41-212ENST00000490308 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
EPB41-212ENST00000490308 LRP1BQ9NZR2 4599 aa0.84□□□□□ -2.28
EPB41-212ENST00000490308 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.28
EPB41-212ENST00000490308 PKHD1L1Q86WI1 4243 aa0.83□□□□□ -2.28
EPB41-212ENST00000490308 STAB1Q9NY15 2570 aa0.83□□□□□ -2.28
EPB41-212ENST00000490308 FAT2Q9NYQ8 4349 aa0.82□□□□□ -2.28
EPB41-212ENST00000490308 LRP1Q07954 4544 aaKnown RBP0.82□□□□□ -2.28
EPB41-212ENST00000490308 DYNC1H1Q14204 4646 aaKnown RBP0.82□□□□□ -2.28
EPB41-212ENST00000490308 FAT1Q14517 4588 aa0.82□□□□□ -2.28
EPB41-212ENST00000490308 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
EPB41-212ENST00000490308 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
EPB41-212ENST00000490308 NBEAL1Q6ZS30 2694 aa0.81□□□□□ -2.28
EPB41-212ENST00000490308 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
EPB41-212ENST00000490308 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
EPB41-212ENST00000490308 STAB2Q8WWQ8 2551 aa0.81□□□□□ -2.28
EPB41-212ENST00000490308 TGP01266 2768 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 TNXBP22105 4242 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 MYCBP2O75592 4640 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 COL6A5A8TX70 2615 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 SPINK1P00995 79 aa0.8□□□□□ -2.28
EPB41-212ENST00000490308 HSPG2P98160 4391 aa0.79□□□□□ -2.28
EPB41-212ENST00000490308 KRTAP5-7Q6L8G8 165 aa0.79□□□□□ -2.28
EPB41-212ENST00000490308 C9orf92A6NGG3 77 aa0.78□□□□□ -2.28
EPB41-212ENST00000490308 RYR2Q92736 4967 aa0.77□□□□□ -2.29
EPB41-212ENST00000490308 RPS29P62273 56 aaKnown RBP0.76□□□□□ -2.29
EPB41-212ENST00000490308 DNHD1Q96M86 4753 aa0.76□□□□□ -2.29
EPB41-212ENST00000490308 SMR3BP02814 79 aaPredicted RBP0.75□□□□□ -2.29
EPB41-212ENST00000490308 MUC17Q685J3 4493 aa0.74□□□□□ -2.29
EPB41-212ENST00000490308 KRTAP19-2Q3LHN2 52 aa0.74□□□□□ -2.29
EPB41-212ENST00000490308 S4R3F8 94 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms