RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CSAG1Q6PB30 78 aa1.71□□□□□ -2.14
GPNMB-212ENST00000487890 LINC00304Q8N9R0 145 aa1.71□□□□□ -2.14
GPNMB-212ENST00000487890 ERC2-IT1O76042 136 aa1.7□□□□□ -2.14
GPNMB-212ENST00000487890 IGLV6-57P01721 117 aa1.7□□□□□ -2.14
GPNMB-212ENST00000487890 COX17Q14061 63 aa1.7□□□□□ -2.14
GPNMB-212ENST00000487890 TMEM254Q8TBM7 123 aa1.7□□□□□ -2.14
GPNMB-212ENST00000487890 A0A087WSZ3 146 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 ETDCA0A1B0GVM5 59 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 ZNF815PA8K554 130 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 BAALC-AS2P0C853 105 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 KRTAP13-3Q3SY46 172 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 Q6JHZ5 121 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
GPNMB-212ENST00000487890 TRAV12-1A0A0B4J245 112 aa1.68□□□□□ -2.14
GPNMB-212ENST00000487890 COX6CP09669 75 aa1.68□□□□□ -2.14
GPNMB-212ENST00000487890 PLNP26678 52 aa1.68□□□□□ -2.14
GPNMB-212ENST00000487890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.68□□□□□ -2.14
GPNMB-212ENST00000487890 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
GPNMB-212ENST00000487890 TRAV23DV6A0A075B6W5 121 aa1.67□□□□□ -2.14
GPNMB-212ENST00000487890 LEPROTL1O95214 131 aa1.67□□□□□ -2.14
GPNMB-212ENST00000487890 SPRR4Q96PI1 79 aa1.67□□□□□ -2.14
GPNMB-212ENST00000487890 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
GPNMB-212ENST00000487890 A0A087WVE0 104 aa1.66□□□□□ -2.14
GPNMB-212ENST00000487890 SPAG11AQ6PDA7 123 aa1.66□□□□□ -2.14
GPNMB-212ENST00000487890 KCNQ1DNQ9H478 68 aa1.66□□□□□ -2.14
GPNMB-212ENST00000487890 IGKV3D-7A0A0C4DH55 119 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 LOC101927531A0A1B0GV80 90 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 TPRXLQ17RH7 258 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 Q6ZRX8 168 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 Q9BRP9 147 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
GPNMB-212ENST00000487890 SPINK1P00995 79 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 SPRR1AP35321 89 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 ATXN8Q156A1 80 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 MUSTN1Q8IVN3 82 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 DEFB105AQ8NG35 78 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 MUC2Q02817 5179 aa1.64□□□□□ -2.15
GPNMB-212ENST00000487890 TRBV7-4A0A0J9YYF1 115 aa1.63□□□□□ -2.15
GPNMB-212ENST00000487890 COX7BP24311 80 aa1.63□□□□□ -2.15
GPNMB-212ENST00000487890 LINC00308Q8TCZ7 52 aa1.63□□□□□ -2.15
GPNMB-212ENST00000487890 ORMDL1Q9P0S3 153 aa1.63□□□□□ -2.15
GPNMB-212ENST00000487890 FAT4Q6V0I7 4981 aa1.63□□□□□ -2.15
GPNMB-212ENST00000487890 C9orf92A6NGG3 77 aa1.62□□□□□ -2.15
GPNMB-212ENST00000487890 ELOF1P60002 83 aaKnown RBP1.62□□□□□ -2.15
GPNMB-212ENST00000487890 ATP5EP2Q5VTU8 51 aa1.62□□□□□ -2.15
GPNMB-212ENST00000487890 SSBP3-AS1Q7Z2R9 100 aa1.62□□□□□ -2.15
GPNMB-212ENST00000487890 DMAC1Q96GE9 116 aa1.62□□□□□ -2.15
GPNMB-212ENST00000487890 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
GPNMB-212ENST00000487890 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
GPNMB-212ENST00000487890 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
GPNMB-212ENST00000487890 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
GPNMB-212ENST00000487890 RPS29P62273 56 aaKnown RBP1.6□□□□□ -2.15
GPNMB-212ENST00000487890 A0A0G2JQZ4 141 aa1.59□□□□□ -2.15
GPNMB-212ENST00000487890 PCOTHQ58A44 107 aa1.59□□□□□ -2.15
GPNMB-212ENST00000487890 SMIM11BQ8TCY0 68 aa1.59□□□□□ -2.15
GPNMB-212ENST00000487890 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
GPNMB-212ENST00000487890 DNAL4O96015 105 aa1.58□□□□□ -2.16
GPNMB-212ENST00000487890 SPRR1BP22528 89 aa1.58□□□□□ -2.16
GPNMB-212ENST00000487890 SPINK7P58062 85 aa1.58□□□□□ -2.16
GPNMB-212ENST00000487890 COX6B2Q6YFQ2 88 aa1.58□□□□□ -2.16
GPNMB-212ENST00000487890 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
GPNMB-212ENST00000487890 M0R2T5 61 aa1.57□□□□□ -2.16
GPNMB-212ENST00000487890 IGKV4-1P06312 121 aa1.57□□□□□ -2.16
GPNMB-212ENST00000487890 NREPQ16612 68 aa1.57□□□□□ -2.16
GPNMB-212ENST00000487890 Q6ZQY7 126 aa1.57□□□□□ -2.16
GPNMB-212ENST00000487890 LINC01558Q9Y6Z2 57 aa1.57□□□□□ -2.16
GPNMB-212ENST00000487890 IGLV5-48A0A075B6I7 105 aa1.56□□□□□ -2.16
GPNMB-212ENST00000487890 PDE6GP18545 87 aa1.56□□□□□ -2.16
GPNMB-212ENST00000487890 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
GPNMB-212ENST00000487890 OBSCN-AS1Q96MR7 158 aa1.56□□□□□ -2.16
GPNMB-212ENST00000487890 LINC00846Q9NV44 126 aa1.56□□□□□ -2.16
GPNMB-212ENST00000487890 RPL37P61927 97 aaKnown RBP1.55□□□□□ -2.16
GPNMB-212ENST00000487890 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
GPNMB-212ENST00000487890 LINC00208Q96KT6 92 aa1.55□□□□□ -2.16
GPNMB-212ENST00000487890 JMJD7-PLA2G4BH0Y9G9 81 aa1.54□□□□□ -2.16
GPNMB-212ENST00000487890 H0Y9P7 68 aa1.54□□□□□ -2.16
GPNMB-212ENST00000487890 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
GPNMB-212ENST00000487890 UQCR11O14957 56 aa1.53□□□□□ -2.16
GPNMB-212ENST00000487890 MT1HP80294 61 aa1.53□□□□□ -2.16
GPNMB-212ENST00000487890 Q96NJ1 140 aa1.53□□□□□ -2.16
GPNMB-212ENST00000487890 H0YGX0 51 aa1.52□□□□□ -2.17
GPNMB-212ENST00000487890 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
GPNMB-212ENST00000487890 ZCCHC13Q8WW36 166 aaKnown RBP1.51□□□□□ -2.17
GPNMB-212ENST00000487890 LINC00472Q9H8W2 130 aa1.51□□□□□ -2.17
GPNMB-212ENST00000487890 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
GPNMB-212ENST00000487890 NDUFB1O75438 58 aa1.5□□□□□ -2.17
GPNMB-212ENST00000487890 KRTAP5-9P26371 169 aa1.5□□□□□ -2.17
GPNMB-212ENST00000487890 SPATA8Q6RVD6 105 aa1.5□□□□□ -2.17
GPNMB-212ENST00000487890 PP632Q6XCG6 107 aa1.49□□□□□ -2.17
GPNMB-212ENST00000487890 UBL5Q9BZL1 73 aa1.49□□□□□ -2.17
GPNMB-212ENST00000487890 FSIP2Q5CZC0 6907 aa1.49□□□□□ -2.17
GPNMB-212ENST00000487890 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
GPNMB-212ENST00000487890 LCE3AQ5TA76 89 aa1.48□□□□□ -2.17
GPNMB-212ENST00000487890 COA5Q86WW8 74 aa1.47□□□□□ -2.17
GPNMB-212ENST00000487890 A0A1B0GU69 56 aa1.46□□□□□ -2.18
GPNMB-212ENST00000487890 ACYP2P14621 99 aa1.46□□□□□ -2.18
GPNMB-212ENST00000487890 LOC110117498A0A087WWA1 95 aa1.44□□□□□ -2.18
GPNMB-212ENST00000487890 WFDC13Q8IUB5 93 aa1.44□□□□□ -2.18
GPNMB-212ENST00000487890 INE1O15225 51 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms