RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 DEFB4AO15263 64 aa1.58□□□□□ -2.16
FXN-204ENST00000484259 DEFB130BP0DP73 79 aa1.58□□□□□ -2.16
FXN-204ENST00000484259 DEFB130AP0DP74 79 aa1.58□□□□□ -2.16
FXN-204ENST00000484259 SPRR5A0A1B0GTR4 108 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 H3BNG1 76 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 DEFB1P60022 68 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 C10orf95Q9H7T3 257 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 NOP10Q9NPE3 64 aaKnown RBP1.57□□□□□ -2.16
FXN-204ENST00000484259 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
FXN-204ENST00000484259 MMP24-AS1A0A0U1RRL7 71 aa1.56□□□□□ -2.16
FXN-204ENST00000484259 HTN3P15516 51 aa1.56□□□□□ -2.16
FXN-204ENST00000484259 KRTAP10-1P60331 282 aa1.56□□□□□ -2.16
FXN-204ENST00000484259 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
FXN-204ENST00000484259 COL7A1Q02388 2944 aa1.55□□□□□ -2.16
FXN-204ENST00000484259 Q5VSD8 79 aa1.55□□□□□ -2.16
FXN-204ENST00000484259 PRKDCP78527 4128 aaKnown RBP1.55□□□□□ -2.16
FXN-204ENST00000484259 TENM2Q9NT68 2774 aa1.54□□□□□ -2.16
FXN-204ENST00000484259 M0QY20 66 aa1.54□□□□□ -2.16
FXN-204ENST00000484259 LCE1FQ5T754 118 aa1.54□□□□□ -2.16
FXN-204ENST00000484259 LELP1Q5T871 98 aa1.54□□□□□ -2.16
FXN-204ENST00000484259 A0A096LPF7 62 aa1.53□□□□□ -2.16
FXN-204ENST00000484259 DEFB105AQ8NG35 78 aa1.53□□□□□ -2.16
FXN-204ENST00000484259 ALMS1Q8TCU4 4167 aa1.52□□□□□ -2.17
FXN-204ENST00000484259 CMYA5Q8N3K9 4069 aa1.52□□□□□ -2.17
FXN-204ENST00000484259 SPRR1AP35321 89 aa1.52□□□□□ -2.17
FXN-204ENST00000484259 LINC01556Q5JQF7 62 aa1.51□□□□□ -2.17
FXN-204ENST00000484259 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
FXN-204ENST00000484259 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
FXN-204ENST00000484259 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
FXN-204ENST00000484259 HUWE1Q7Z6Z7 4374 aaKnown RBP1.49□□□□□ -2.17
FXN-204ENST00000484259 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
FXN-204ENST00000484259 KRTAP13-3Q3SY46 172 aa1.47□□□□□ -2.17
FXN-204ENST00000484259 CSMD3Q7Z407 3707 aa1.45□□□□□ -2.18
FXN-204ENST00000484259 SPRR1BP22528 89 aa1.45□□□□□ -2.18
FXN-204ENST00000484259 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
FXN-204ENST00000484259 PRLHP81277 87 aa1.45□□□□□ -2.18
FXN-204ENST00000484259 CLPSL2Q6UWE3 100 aa1.45□□□□□ -2.18
FXN-204ENST00000484259 KMT2CQ8NEZ4 4911 aaKnown RBP1.45□□□□□ -2.18
FXN-204ENST00000484259 DNAH7Q8WXX0 4024 aa1.44□□□□□ -2.18
FXN-204ENST00000484259 S4R3F8 94 aa1.44□□□□□ -2.18
FXN-204ENST00000484259 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
FXN-204ENST00000484259 STARD9Q9P2P6 4700 aa1.44□□□□□ -2.18
FXN-204ENST00000484259 RYR2Q92736 4967 aa1.43□□□□□ -2.18
FXN-204ENST00000484259 DEFB104AQ8WTQ1 72 aa1.43□□□□□ -2.18
FXN-204ENST00000484259 DNAH1Q9P2D7 4330 aa1.42□□□□□ -2.18
FXN-204ENST00000484259 RYR3Q15413 4870 aa1.41□□□□□ -2.18
FXN-204ENST00000484259 SMR3BP02814 79 aaPredicted RBP1.41□□□□□ -2.18
FXN-204ENST00000484259 LCE3CQ5T5A8 94 aa1.41□□□□□ -2.18
FXN-204ENST00000484259 A0A096LNI7 61 aa1.4□□□□□ -2.19
FXN-204ENST00000484259 KRTAP13-1Q8IUC0 172 aa1.4□□□□□ -2.19
FXN-204ENST00000484259 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.19
FXN-204ENST00000484259 KMT2AQ03164 3969 aa1.4□□□□□ -2.19
FXN-204ENST00000484259 BIRC6Q9NR09 4857 aa1.4□□□□□ -2.19
FXN-204ENST00000484259 PLECQ15149 4684 aaKnown RBP1.4□□□□□ -2.19
FXN-204ENST00000484259 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
FXN-204ENST00000484259 LYSTQ99698 3801 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 VPS13DQ5THJ4 4388 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 DNAH6Q9C0G6 4158 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 SPINK6Q6UWN8 80 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 SACSQ9NZJ4 4579 aa1.39□□□□□ -2.19
FXN-204ENST00000484259 HYDINQ4G0P3 5121 aa1.38□□□□□ -2.19
FXN-204ENST00000484259 KRTAP10-10P60014 251 aa1.38□□□□□ -2.19
FXN-204ENST00000484259 EPPK1P58107 5090 aaKnown RBP1.37□□□□□ -2.19
FXN-204ENST00000484259 A0A0D9SG42 100 aa1.36□□□□□ -2.19
FXN-204ENST00000484259 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
FXN-204ENST00000484259 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
FXN-204ENST00000484259 DNAH10Q8IVF4 4471 aa1.36□□□□□ -2.19
FXN-204ENST00000484259 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
FXN-204ENST00000484259 KIAA1109Q2LD37 5005 aa1.36□□□□□ -2.19
FXN-204ENST00000484259 DNAH11Q96DT5 4516 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 SRRM2Q9UQ35 2752 aaKnown RBP1.35□□□□□ -2.19
FXN-204ENST00000484259 DNAH17Q9UFH2 4485 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 HECTD4Q9Y4D8 3996 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 SPINK1P00995 79 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
FXN-204ENST00000484259 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 LCE1BQ5T7P3 118 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 PKHD1P08F94 4074 aa1.35□□□□□ -2.19
FXN-204ENST00000484259 PKD1P98161 4303 aa1.34□□□□□ -2.19
FXN-204ENST00000484259 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.19
FXN-204ENST00000484259 HERC2O95714 4834 aa1.33□□□□□ -2.2
FXN-204ENST00000484259 DNAH2Q9P225 4427 aa1.33□□□□□ -2.2
FXN-204ENST00000484259 RYR1P21817 5038 aa1.33□□□□□ -2.2
FXN-204ENST00000484259 PCLOQ9Y6V0 5065 aa1.31□□□□□ -2.2
FXN-204ENST00000484259 DYNC1H1Q14204 4646 aaKnown RBP1.31□□□□□ -2.2
FXN-204ENST00000484259 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
FXN-204ENST00000484259 LRP1BQ9NZR2 4599 aa1.31□□□□□ -2.2
FXN-204ENST00000484259 DNAH5Q8TE73 4624 aa1.31□□□□□ -2.2
FXN-204ENST00000484259 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
FXN-204ENST00000484259 HSPG2P98160 4391 aa1.3□□□□□ -2.2
FXN-204ENST00000484259 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
FXN-204ENST00000484259 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
FXN-204ENST00000484259 M0QZ58 72 aa1.28□□□□□ -2.2
FXN-204ENST00000484259 LCE3EQ5T5B0 92 aa1.28□□□□□ -2.2
FXN-204ENST00000484259 FAT1Q14517 4588 aa1.27□□□□□ -2.21
FXN-204ENST00000484259 VPS13BQ7Z7G8 4022 aa1.26□□□□□ -2.21
FXN-204ENST00000484259 DNAH8Q96JB1 4490 aa1.26□□□□□ -2.21
FXN-204ENST00000484259 MYCBP2O75592 4640 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms