RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 LINC00304Q8N9R0 145 aa4.49□□□□□ -1.69
PDCD4-206ENST00000481353 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
PDCD4-206ENST00000481353 SRRM2Q9UQ35 2752 aaKnown RBP4.48□□□□□ -1.69
PDCD4-206ENST00000481353 H0YAA0 97 aa4.47□□□□□ -1.69
PDCD4-206ENST00000481353 ROMO1P60602 79 aa4.47□□□□□ -1.69
PDCD4-206ENST00000481353 DYNC2H1Q8NCM8 4307 aaKnown RBP4.46□□□□□ -1.7
PDCD4-206ENST00000481353 ANK2Q01484 3957 aa4.46□□□□□ -1.7
PDCD4-206ENST00000481353 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
PDCD4-206ENST00000481353 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
PDCD4-206ENST00000481353 CMYA5Q8N3K9 4069 aa4.43□□□□□ -1.7
PDCD4-206ENST00000481353 NBEAL1Q6ZS30 2694 aa4.42□□□□□ -1.7
PDCD4-206ENST00000481353 STAB1Q9NY15 2570 aa4.42□□□□□ -1.7
PDCD4-206ENST00000481353 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
PDCD4-206ENST00000481353 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
PDCD4-206ENST00000481353 NOTCH1P46531 2555 aa4.42□□□□□ -1.7
PDCD4-206ENST00000481353 DNAH10Q8IVF4 4471 aa4.41□□□□□ -1.7
PDCD4-206ENST00000481353 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
PDCD4-206ENST00000481353 STAB2Q8WWQ8 2551 aa4.37□□□□□ -1.71
PDCD4-206ENST00000481353 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
PDCD4-206ENST00000481353 RPL37P61927 97 aaKnown RBP4.37□□□□□ -1.71
PDCD4-206ENST00000481353 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
PDCD4-206ENST00000481353 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
PDCD4-206ENST00000481353 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
PDCD4-206ENST00000481353 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.71
PDCD4-206ENST00000481353 LYSTQ99698 3801 aa4.32□□□□□ -1.72
PDCD4-206ENST00000481353 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
PDCD4-206ENST00000481353 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
PDCD4-206ENST00000481353 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
PDCD4-206ENST00000481353 PLECQ15149 4684 aaKnown RBP4.28□□□□□ -1.72
PDCD4-206ENST00000481353 CRIPTQ9P021 101 aa4.28□□□□□ -1.72
PDCD4-206ENST00000481353 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
PDCD4-206ENST00000481353 HECTD4Q9Y4D8 3996 aa4.25□□□□□ -1.73
PDCD4-206ENST00000481353 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
PDCD4-206ENST00000481353 TGP01266 2768 aa4.25□□□□□ -1.73
PDCD4-206ENST00000481353 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
PDCD4-206ENST00000481353 P0C880 135 aa4.22□□□□□ -1.73
PDCD4-206ENST00000481353 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
PDCD4-206ENST00000481353 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
PDCD4-206ENST00000481353 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
PDCD4-206ENST00000481353 S4R3F8 94 aa4.2□□□□□ -1.74
PDCD4-206ENST00000481353 PRKDCP78527 4128 aaKnown RBP4.19□□□□□ -1.74
PDCD4-206ENST00000481353 DNAH7Q8WXX0 4024 aa4.19□□□□□ -1.74
PDCD4-206ENST00000481353 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
PDCD4-206ENST00000481353 KRTAP10-8P60410 259 aa4.18□□□□□ -1.74
PDCD4-206ENST00000481353 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
PDCD4-206ENST00000481353 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
PDCD4-206ENST00000481353 M0QZ58 72 aa4.17□□□□□ -1.74
PDCD4-206ENST00000481353 TPRXLQ17RH7 258 aa4.17□□□□□ -1.74
PDCD4-206ENST00000481353 MEGF8Q7Z7M0 2845 aa4.16□□□□□ -1.74
PDCD4-206ENST00000481353 CSMD3Q7Z407 3707 aa4.16□□□□□ -1.74
PDCD4-206ENST00000481353 A0A0D9SG42 100 aa4.14□□□□□ -1.75
PDCD4-206ENST00000481353 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
PDCD4-206ENST00000481353 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
PDCD4-206ENST00000481353 FLG2Q5D862 2391 aaPredicted RBP4.12□□□□□ -1.75
PDCD4-206ENST00000481353 FBN3Q75N90 2809 aa4.12□□□□□ -1.75
PDCD4-206ENST00000481353 R4GN34 69 aa4.12□□□□□ -1.75
PDCD4-206ENST00000481353 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
PDCD4-206ENST00000481353 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
PDCD4-206ENST00000481353 KRTAP10-4P60372 401 aaPredicted RBP4.08□□□□□ -1.76
PDCD4-206ENST00000481353 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
PDCD4-206ENST00000481353 LRP1BQ9NZR2 4599 aa4.07□□□□□ -1.76
PDCD4-206ENST00000481353 SMR3BP02814 79 aaPredicted RBP4.06□□□□□ -1.76
PDCD4-206ENST00000481353 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
PDCD4-206ENST00000481353 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
PDCD4-206ENST00000481353 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
PDCD4-206ENST00000481353 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
PDCD4-206ENST00000481353 DMBT1Q9UGM3 2413 aaPredicted RBP4□□□□□ -1.77
PDCD4-206ENST00000481353 PKD1P98161 4303 aa3.99□□□□□ -1.77
PDCD4-206ENST00000481353 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
PDCD4-206ENST00000481353 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
PDCD4-206ENST00000481353 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
PDCD4-206ENST00000481353 KRTAP21-3Q3LHN1 58 aa3.93□□□□□ -1.78
PDCD4-206ENST00000481353 FAT2Q9NYQ8 4349 aa3.92□□□□□ -1.78
PDCD4-206ENST00000481353 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
PDCD4-206ENST00000481353 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
PDCD4-206ENST00000481353 PKHD1P08F94 4074 aa3.89□□□□□ -1.79
PDCD4-206ENST00000481353 APOBP04114 4563 aaKnown RBP3.88□□□□□ -1.79
PDCD4-206ENST00000481353 KRTAP10-10P60014 251 aa3.85□□□□□ -1.79
PDCD4-206ENST00000481353 Q5VSD8 79 aa3.85□□□□□ -1.79
PDCD4-206ENST00000481353 DYNC1H1Q14204 4646 aaKnown RBP3.81□□□□□ -1.8
PDCD4-206ENST00000481353 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
PDCD4-206ENST00000481353 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
PDCD4-206ENST00000481353 TNXBP22105 4242 aa3.79□□□□□ -1.8
PDCD4-206ENST00000481353 FAT1Q14517 4588 aa3.78□□□□□ -1.8
PDCD4-206ENST00000481353 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
PDCD4-206ENST00000481353 HYDINQ4G0P3 5121 aa3.74□□□□□ -1.81
PDCD4-206ENST00000481353 HSPG2P98160 4391 aa3.72□□□□□ -1.81
PDCD4-206ENST00000481353 TNP1P09430 55 aa3.69□□□□□ -1.82
PDCD4-206ENST00000481353 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
PDCD4-206ENST00000481353 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
PDCD4-206ENST00000481353 DNHD1Q96M86 4753 aa3.63□□□□□ -1.83
PDCD4-206ENST00000481353 MYCBP2O75592 4640 aa3.6□□□□□ -1.83
PDCD4-206ENST00000481353 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
PDCD4-206ENST00000481353 INE1O15225 51 aa3.53□□□□□ -1.84
PDCD4-206ENST00000481353 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
PDCD4-206ENST00000481353 RYR2Q92736 4967 aa3.48□□□□□ -1.85
PDCD4-206ENST00000481353 RYR1P21817 5038 aa3.46□□□□□ -1.86
PDCD4-206ENST00000481353 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
PDCD4-206ENST00000481353 LRP2P98164 4655 aa3.44□□□□□ -1.86
PDCD4-206ENST00000481353 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms