RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SPINK1P00995 79 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SFTA3P0C7M3 94 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR1BP22528 89 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR2BP35325 72 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR2AP35326 72 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 POLR2KP53803 58 aaKnown RBP0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SNRPGP62308 76 aaKnown RBP0.06□□□□□ -2.4
PTCD3-209ENST00000472044 PRLHP81277 87 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 DEFA5Q01523 94 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 WT1-ASQ06250 92 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 NREPQ16612 68 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB112Q30KQ8 113 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 FAM223AQ8IWN6 122 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 GAFA1Q96PS6 74 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 SMIM2Q9BVW6 85 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 STARD9Q9P2P6 4700 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 NUP188Q5SRE5 1749 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 PKD1L3Q7Z443 1732 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 NRAPQ86VF7 1730 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 IFT172Q9UG01 1749 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 ARFGEF2Q9Y6D5 1785 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 DUOX1Q9NRD9 1551 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 CLTCL1P53675 1640 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MROH1Q8NDA8 1641 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 NRXN3Q9Y4C0 1643 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MROH2AA6NES4 1674 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 ZNF831Q5JPB2 1677 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 ITSN2Q9NZM3 1697 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 TJP1Q07157 1748 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 DDX60LQ5H9U9 1706 aaKnown RBP0.05□□□□□ -2.4
PTCD3-209ENST00000472044 FMN2Q9NZ56 1722 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 A0A1B0GUL6 1792 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 COL14A1Q05707 1796 aaKnown RBP0.05□□□□□ -2.4
PTCD3-209ENST00000472044 A0A087WVE0 104 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 H0YGG7 62 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 K7EIM0 57 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 M0QY20 66 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 M0R129 80 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 NDUFA1O15239 70 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MT1EP04732 61 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 TNP1P09430 55 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR2DP22532 72 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR1AP35321 89 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 LINC00158P58513 81 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MT1HP80294 61 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 HAMPP81172 84 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 LINC01590Q5TEZ4 76 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MINOS1Q5TGZ0 78 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 SSBP3-AS1Q7Z2R9 100 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 TOMM5Q8N4H5 51 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 WFDC9Q8NEX5 89 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB105AQ8NG35 78 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 LINC00474Q9P2X8 69 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 C6orf48Q9UBA6 75 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 PRO0255Q9UI72 69 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 ZNF236Q9UL36 1845 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MROH2BQ7Z745 1585 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 KIF21BO75037 1637 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 CROCC2H7BZ55 1655 aa0.05□□□□□ -2.4
PTCD3-209ENST00000472044 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
PTCD3-209ENST00000472044 MUC5ACP98088 5654 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 CDC42BPAQ5VT25 1732 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 MON2Q7Z3U7 1717 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 PARP4Q9UKK3 1724 aaKnown RBP0.04□□□□□ -2.4
PTCD3-209ENST00000472044 H3BNG1 76 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 M0R2T5 61 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 MT1HL1P0DM35 61 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR2EP22531 72 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 RPS27P42677 84 aaKnown RBP0.04□□□□□ -2.4
PTCD3-209ENST00000472044 CRIP1P50238 77 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB136Q30KP8 78 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB135Q30KP9 77 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 H1FX-AS1Q4G0G2 97 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 CLPSL2Q6UWE3 100 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 ENHOQ6UWT2 76 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 RPS27LQ71UM5 84 aaKnown RBP0.04□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB107AQ8IZN7 70 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 LINC00308Q8TCZ7 52 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 MT1LQ93083 61 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 GNG13Q9P2W3 67 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 S4R3F8 94 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 HERC1Q15751 4861 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 LMO7Q8WWI1 1683 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 DDX60Q8IY21 1712 aaKnown RBP0.04□□□□□ -2.4
PTCD3-209ENST00000472044 TOGARAM1Q9Y4F4 1720 aa0.04□□□□□ -2.4
PTCD3-209ENST00000472044 HERC2O95714 4834 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 IQGAP1P46940 1657 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 SCN7AQ01118 1682 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 GCC2Q8IWJ2 1684 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 H3BVH4 76 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 M0R1W7 72 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 NDUFA3O95167 84 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB130BP0DP73 79 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB130AP0DP74 79 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 CD52P31358 61 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 KRTAP19-5Q3LI72 72 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 DEFB124Q8NES8 71 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 FDCSPQ8NFU4 85 aa0.03□□□□□ -2.4
PTCD3-209ENST00000472044 SPRR2FQ96RM1 72 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms