RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
VPS26A-204ENST00000467852 R4GN34 69 aa4.24□□□□□ -1.73
VPS26A-204ENST00000467852 DNAL4O96015 105 aa4.23□□□□□ -1.73
VPS26A-204ENST00000467852 YPEL4Q96NS1 127 aa4.22□□□□□ -1.73
VPS26A-204ENST00000467852 MT1MQ8N339 61 aa4.19□□□□□ -1.74
VPS26A-204ENST00000467852 SNAPINO95295 136 aa4.17□□□□□ -1.74
VPS26A-204ENST00000467852 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
VPS26A-204ENST00000467852 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
VPS26A-204ENST00000467852 A0A087WVE0 104 aa4.15□□□□□ -1.75
VPS26A-204ENST00000467852 APOC3P02656 99 aa4.15□□□□□ -1.75
VPS26A-204ENST00000467852 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
VPS26A-204ENST00000467852 HIST1H4GQ99525 98 aa4.15□□□□□ -1.75
VPS26A-204ENST00000467852 C9JAW5 83 aa4.14□□□□□ -1.75
VPS26A-204ENST00000467852 M0QZ58 72 aa4.14□□□□□ -1.75
VPS26A-204ENST00000467852 NDUFC1O43677 76 aa4.14□□□□□ -1.75
VPS26A-204ENST00000467852 KRTDAPP60985 99 aa4.14□□□□□ -1.75
VPS26A-204ENST00000467852 CXCL6P80162 114 aa4.12□□□□□ -1.75
VPS26A-204ENST00000467852 SVBPQ8N300 66 aa4.12□□□□□ -1.75
VPS26A-204ENST00000467852 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
VPS26A-204ENST00000467852 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
VPS26A-204ENST00000467852 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
VPS26A-204ENST00000467852 NDUFA5Q16718 116 aa4.09□□□□□ -1.75
VPS26A-204ENST00000467852 A0A0B4J2C4 111 aa4.08□□□□□ -1.76
VPS26A-204ENST00000467852 A0A1B0GW54 56 aa4.08□□□□□ -1.76
VPS26A-204ENST00000467852 NREPQ16612 68 aa4.06□□□□□ -1.76
VPS26A-204ENST00000467852 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
VPS26A-204ENST00000467852 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
VPS26A-204ENST00000467852 CASC2Q6XLA1 102 aa4.03□□□□□ -1.76
VPS26A-204ENST00000467852 PRO1854Q9UHT4 67 aa4.02□□□□□ -1.77
VPS26A-204ENST00000467852 HSBP1L1C9JCN9 74 aa3.99□□□□□ -1.77
VPS26A-204ENST00000467852 P0C880 135 aa3.99□□□□□ -1.77
VPS26A-204ENST00000467852 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
VPS26A-204ENST00000467852 COA6Q5JTJ3 125 aaKnown RBP3.98□□□□□ -1.77
VPS26A-204ENST00000467852 MT1LQ93083 61 aa3.98□□□□□ -1.77
VPS26A-204ENST00000467852 BATFQ16520 125 aa3.97□□□□□ -1.77
VPS26A-204ENST00000467852 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
VPS26A-204ENST00000467852 PSMB2P49721 201 aa3.96□□□□□ -1.78
VPS26A-204ENST00000467852 NAA38Q9BRA0 125 aaKnown RBP3.96□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BKO60814 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BJP06899 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 COX6CP09669 75 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BOP23527 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BBP33778 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BDP58876 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BCP62807 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST2H2BEQ16778 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.95□□□□□ -1.78
VPS26A-204ENST00000467852 CEND1Q8N111 149 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BHQ93079 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BNQ99877 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 HIST1H2BMQ99879 126 aa3.95□□□□□ -1.78
VPS26A-204ENST00000467852 LOC110117498A0A087WWA1 95 aa3.92□□□□□ -1.78
VPS26A-204ENST00000467852 HIST3H2BBQ8N257 126 aa3.91□□□□□ -1.78
VPS26A-204ENST00000467852 MT-ATP8P03928 68 aa3.9□□□□□ -1.79
VPS26A-204ENST00000467852 BAALC-AS2P0C853 105 aa3.9□□□□□ -1.79
VPS26A-204ENST00000467852 BPY2O14599 106 aa3.89□□□□□ -1.79
VPS26A-204ENST00000467852 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
VPS26A-204ENST00000467852 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
VPS26A-204ENST00000467852 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
VPS26A-204ENST00000467852 A0A1W2PPM0 123 aa3.87□□□□□ -1.79
VPS26A-204ENST00000467852 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
VPS26A-204ENST00000467852 Q8N9L7 120 aa3.86□□□□□ -1.79
VPS26A-204ENST00000467852 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
VPS26A-204ENST00000467852 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
VPS26A-204ENST00000467852 K7EP34 96 aa3.85□□□□□ -1.79
VPS26A-204ENST00000467852 A8MU10 97 aa3.84□□□□□ -1.79
VPS26A-204ENST00000467852 COX8AP10176 69 aa3.84□□□□□ -1.79
VPS26A-204ENST00000467852 HIST1H2BLQ99880 126 aa3.84□□□□□ -1.79
VPS26A-204ENST00000467852 ACYP1P07311 99 aa3.82□□□□□ -1.8
VPS26A-204ENST00000467852 A0A0D9SG42 100 aa3.81□□□□□ -1.8
VPS26A-204ENST00000467852 DLEU1O43261 78 aa3.81□□□□□ -1.8
VPS26A-204ENST00000467852 C14orf132Q9NPU4 83 aa3.81□□□□□ -1.8
VPS26A-204ENST00000467852 HIGD1BQ9P298 99 aa3.81□□□□□ -1.8
VPS26A-204ENST00000467852 TP53AIP1Q9HCN2 124 aa3.79□□□□□ -1.8
VPS26A-204ENST00000467852 SCGB1C2P0DMR2 95 aa3.78□□□□□ -1.8
VPS26A-204ENST00000467852 FXYD2P54710 66 aa3.78□□□□□ -1.8
VPS26A-204ENST00000467852 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
VPS26A-204ENST00000467852 TRAV22A0A0B4J277 110 aa3.72□□□□□ -1.81
VPS26A-204ENST00000467852 C14orf144Q96I85 54 aa3.72□□□□□ -1.81
VPS26A-204ENST00000467852 K7ERJ3 54 aa3.71□□□□□ -1.82
VPS26A-204ENST00000467852 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
VPS26A-204ENST00000467852 ATXN8Q156A1 80 aa3.67□□□□□ -1.82
VPS26A-204ENST00000467852 VAMP8Q9BV40 100 aa3.64□□□□□ -1.83
VPS26A-204ENST00000467852 S100A2P29034 98 aa3.6□□□□□ -1.83
VPS26A-204ENST00000467852 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
VPS26A-204ENST00000467852 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
VPS26A-204ENST00000467852 HSD52Q0P140 79 aa3.53□□□□□ -1.84
VPS26A-204ENST00000467852 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
VPS26A-204ENST00000467852 PRO0461Q9UI25 63 aa3.48□□□□□ -1.85
VPS26A-204ENST00000467852 ATOX1O00244 68 aa3.44□□□□□ -1.86
VPS26A-204ENST00000467852 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
VPS26A-204ENST00000467852 UBL5Q9BZL1 73 aa3.43□□□□□ -1.86
VPS26A-204ENST00000467852 SPCS1Q9Y6A9 102 aa3.43□□□□□ -1.86
VPS26A-204ENST00000467852 TSTD3H0UI37 97 aa3.42□□□□□ -1.86
VPS26A-204ENST00000467852 H0Y9P7 68 aa3.41□□□□□ -1.86
VPS26A-204ENST00000467852 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
VPS26A-204ENST00000467852 MT1AP04731 61 aa3.38□□□□□ -1.87
VPS26A-204ENST00000467852 UQCRQO14949 82 aa3.34□□□□□ -1.87
VPS26A-204ENST00000467852 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
VPS26A-204ENST00000467852 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms