RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 NREPQ16612 68 aa1.25□□□□□ -2.21
R3HDM1-212ENST00000456040 CYSTM1Q9H1C7 97 aa1.25□□□□□ -2.21
R3HDM1-212ENST00000456040 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
R3HDM1-212ENST00000456040 TGP01266 2768 aa1.25□□□□□ -2.21
R3HDM1-212ENST00000456040 A0A087WTM6 91 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 TRBV7-4A0A0J9YYF1 115 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 TRBV7-7A0A0K0K1E9 115 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 NDUFB1O75438 58 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 SPRR1AP35321 89 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 Q5VV11 94 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 SERP2Q8N6R1 65 aa1.24□□□□□ -2.21
R3HDM1-212ENST00000456040 IGLV5-48A0A075B6I7 105 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 A0A096LNI7 61 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 HAMPP81172 84 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 PLAC8Q9NZF1 115 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 CMYA5Q8N3K9 4069 aa1.23□□□□□ -2.21
R3HDM1-212ENST00000456040 NDUFC1O43677 76 aa1.22□□□□□ -2.21
R3HDM1-212ENST00000456040 SPRR1BP22528 89 aa1.22□□□□□ -2.21
R3HDM1-212ENST00000456040 SPRR4Q96PI1 79 aa1.22□□□□□ -2.21
R3HDM1-212ENST00000456040 KLKP1Q107X0 134 aa1.21□□□□□ -2.22
R3HDM1-212ENST00000456040 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
R3HDM1-212ENST00000456040 LINC00846Q9NV44 126 aa1.21□□□□□ -2.22
R3HDM1-212ENST00000456040 HUWE1Q7Z6Z7 4374 aaKnown RBP1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 LCE6AA0A183 80 aa1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 H7BZZ5 65 aa1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 PRLHP81277 87 aa1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 DYNC2H1Q8NCM8 4307 aaKnown RBP1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 DNAH9Q9NYC9 4486 aa1.2□□□□□ -2.22
R3HDM1-212ENST00000456040 DNAH7Q8WXX0 4024 aa1.19□□□□□ -2.22
R3HDM1-212ENST00000456040 SPINK6Q6UWN8 80 aa1.19□□□□□ -2.22
R3HDM1-212ENST00000456040 Q6ZSA8 131 aa1.19□□□□□ -2.22
R3HDM1-212ENST00000456040 Q96NJ1 140 aa1.19□□□□□ -2.22
R3HDM1-212ENST00000456040 SPINK1P00995 79 aa1.18□□□□□ -2.22
R3HDM1-212ENST00000456040 ACYP2P14621 99 aa1.18□□□□□ -2.22
R3HDM1-212ENST00000456040 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
R3HDM1-212ENST00000456040 VPS13DQ5THJ4 4388 aa1.18□□□□□ -2.22
R3HDM1-212ENST00000456040 PRKDCP78527 4128 aaKnown RBP1.17□□□□□ -2.22
R3HDM1-212ENST00000456040 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
R3HDM1-212ENST00000456040 ALMS1Q8TCU4 4167 aa1.16□□□□□ -2.22
R3HDM1-212ENST00000456040 SRRM2Q9UQ35 2752 aaKnown RBP1.16□□□□□ -2.22
R3HDM1-212ENST00000456040 A0A087WVE0 104 aa1.16□□□□□ -2.22
R3HDM1-212ENST00000456040 LINC00472Q9H8W2 130 aa1.16□□□□□ -2.22
R3HDM1-212ENST00000456040 HECTD4Q9Y4D8 3996 aa1.15□□□□□ -2.22
R3HDM1-212ENST00000456040 DNAH6Q9C0G6 4158 aa1.15□□□□□ -2.22
R3HDM1-212ENST00000456040 DNAH1Q9P2D7 4330 aa1.15□□□□□ -2.22
R3HDM1-212ENST00000456040 K7EQZ3 153 aa1.15□□□□□ -2.23
R3HDM1-212ENST00000456040 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.23
R3HDM1-212ENST00000456040 PRR15LQ9BU68 103 aa1.15□□□□□ -2.23
R3HDM1-212ENST00000456040 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
R3HDM1-212ENST00000456040 H0Y9P7 68 aa1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 UQCR11O14957 56 aa1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 PLECQ15149 4684 aaKnown RBP1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 LYSTQ99698 3801 aa1.14□□□□□ -2.23
R3HDM1-212ENST00000456040 MMP24-AS1A0A0U1RRL7 71 aa1.13□□□□□ -2.23
R3HDM1-212ENST00000456040 DNAH2Q9P225 4427 aa1.13□□□□□ -2.23
R3HDM1-212ENST00000456040 DNAH17Q9UFH2 4485 aa1.12□□□□□ -2.23
R3HDM1-212ENST00000456040 DNAH10Q8IVF4 4471 aa1.12□□□□□ -2.23
R3HDM1-212ENST00000456040 KMT2AQ03164 3969 aa1.12□□□□□ -2.23
R3HDM1-212ENST00000456040 DNHD1Q96M86 4753 aa1.11□□□□□ -2.23
R3HDM1-212ENST00000456040 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
R3HDM1-212ENST00000456040 Q5VSD8 79 aa1.11□□□□□ -2.23
R3HDM1-212ENST00000456040 STARD9Q9P2P6 4700 aa1.1□□□□□ -2.23
R3HDM1-212ENST00000456040 FRAS1Q86XX4 4008 aa1.1□□□□□ -2.23
R3HDM1-212ENST00000456040 PKD1P98161 4303 aa1.09□□□□□ -2.23
R3HDM1-212ENST00000456040 DNAH11Q96DT5 4516 aa1.09□□□□□ -2.23
R3HDM1-212ENST00000456040 RPL37P61927 97 aaKnown RBP1.09□□□□□ -2.23
R3HDM1-212ENST00000456040 FAT2Q9NYQ8 4349 aa1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 VPS13BQ7Z7G8 4022 aa1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 DNAH8Q96JB1 4490 aa1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 PKHD1P08F94 4074 aa1.08□□□□□ -2.24
R3HDM1-212ENST00000456040 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
R3HDM1-212ENST00000456040 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
R3HDM1-212ENST00000456040 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
R3HDM1-212ENST00000456040 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
R3HDM1-212ENST00000456040 DNAH5Q8TE73 4624 aa1.06□□□□□ -2.24
R3HDM1-212ENST00000456040 A0A1B0GU69 56 aa1.05□□□□□ -2.24
R3HDM1-212ENST00000456040 SPINK7P58062 85 aa1.05□□□□□ -2.24
R3HDM1-212ENST00000456040 DYNC1H1Q14204 4646 aaKnown RBP1.04□□□□□ -2.24
R3HDM1-212ENST00000456040 COX6B2Q6YFQ2 88 aa1.04□□□□□ -2.24
R3HDM1-212ENST00000456040 H1FX-AS1Q4G0G2 97 aa1.03□□□□□ -2.24
R3HDM1-212ENST00000456040 S4R3F8 94 aa1.03□□□□□ -2.24
R3HDM1-212ENST00000456040 PKHD1L1Q86WI1 4243 aa1.02□□□□□ -2.25
R3HDM1-212ENST00000456040 APOBP04114 4563 aaKnown RBP1.02□□□□□ -2.25
R3HDM1-212ENST00000456040 MT1HL1P0DM35 61 aa1.02□□□□□ -2.25
R3HDM1-212ENST00000456040 FAT1Q14517 4588 aa1.02□□□□□ -2.25
R3HDM1-212ENST00000456040 HSPG2P98160 4391 aa1.01□□□□□ -2.25
R3HDM1-212ENST00000456040 SPATA8Q6RVD6 105 aa1.01□□□□□ -2.25
R3HDM1-212ENST00000456040 KMT2CQ8NEZ4 4911 aaKnown RBP1.01□□□□□ -2.25
R3HDM1-212ENST00000456040 HYDINQ4G0P3 5121 aa1□□□□□ -2.25
R3HDM1-212ENST00000456040 RYR2Q92736 4967 aa0.99□□□□□ -2.25
R3HDM1-212ENST00000456040 H0YAA0 97 aa0.99□□□□□ -2.25
R3HDM1-212ENST00000456040 M0QZ58 72 aa0.99□□□□□ -2.25
R3HDM1-212ENST00000456040 TNXBP22105 4242 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms