RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
TRAV25-201ENST00000390454 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
TRAV25-201ENST00000390454 STAB2Q8WWQ8 2551 aa3.27□□□□□ -1.89
TRAV25-201ENST00000390454 ROMO1P60602 79 aa3.26□□□□□ -1.89
TRAV25-201ENST00000390454 COL6A5A8TX70 2615 aa3.25□□□□□ -1.89
TRAV25-201ENST00000390454 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
TRAV25-201ENST00000390454 VPS13DQ5THJ4 4388 aa3.23□□□□□ -1.89
TRAV25-201ENST00000390454 DNAH8Q96JB1 4490 aa3.23□□□□□ -1.89
TRAV25-201ENST00000390454 DNAH17Q9UFH2 4485 aa3.23□□□□□ -1.89
TRAV25-201ENST00000390454 MGAM2Q2M2H8 2515 aa3.22□□□□□ -1.89
TRAV25-201ENST00000390454 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
TRAV25-201ENST00000390454 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.9
TRAV25-201ENST00000390454 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
TRAV25-201ENST00000390454 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
TRAV25-201ENST00000390454 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
TRAV25-201ENST00000390454 PLECQ15149 4684 aaKnown RBP3.17□□□□□ -1.9
TRAV25-201ENST00000390454 LYSTQ99698 3801 aa3.17□□□□□ -1.9
TRAV25-201ENST00000390454 COL7A1Q02388 2944 aa3.16□□□□□ -1.9
TRAV25-201ENST00000390454 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
TRAV25-201ENST00000390454 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
TRAV25-201ENST00000390454 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
TRAV25-201ENST00000390454 TGP01266 2768 aa3.14□□□□□ -1.91
TRAV25-201ENST00000390454 A0A1B0GVY2 172 aa3.14□□□□□ -1.91
TRAV25-201ENST00000390454 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
TRAV25-201ENST00000390454 DNAH7Q8WXX0 4024 aa3.13□□□□□ -1.91
TRAV25-201ENST00000390454 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
TRAV25-201ENST00000390454 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
TRAV25-201ENST00000390454 CRIPTQ9P021 101 aa3.12□□□□□ -1.91
TRAV25-201ENST00000390454 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
TRAV25-201ENST00000390454 DNAH2Q9P225 4427 aa3.11□□□□□ -1.91
TRAV25-201ENST00000390454 S4R3F8 94 aa3.11□□□□□ -1.91
TRAV25-201ENST00000390454 STARD9Q9P2P6 4700 aa3.11□□□□□ -1.91
TRAV25-201ENST00000390454 P0C880 135 aa3.1□□□□□ -1.91
TRAV25-201ENST00000390454 MEGF8Q7Z7M0 2845 aa3.1□□□□□ -1.91
TRAV25-201ENST00000390454 DNAH11Q96DT5 4516 aa3.09□□□□□ -1.91
TRAV25-201ENST00000390454 CSMD3Q7Z407 3707 aa3.09□□□□□ -1.92
TRAV25-201ENST00000390454 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
TRAV25-201ENST00000390454 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
TRAV25-201ENST00000390454 A0A0D9SG42 100 aa3.07□□□□□ -1.92
TRAV25-201ENST00000390454 KRTAP10-4P60372 401 aaPredicted RBP3.07□□□□□ -1.92
TRAV25-201ENST00000390454 M0QZ58 72 aa3.06□□□□□ -1.92
TRAV25-201ENST00000390454 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
TRAV25-201ENST00000390454 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
TRAV25-201ENST00000390454 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
TRAV25-201ENST00000390454 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
TRAV25-201ENST00000390454 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
TRAV25-201ENST00000390454 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
TRAV25-201ENST00000390454 LRP1BQ9NZR2 4599 aa3.02□□□□□ -1.93
TRAV25-201ENST00000390454 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
TRAV25-201ENST00000390454 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
TRAV25-201ENST00000390454 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
TRAV25-201ENST00000390454 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
TRAV25-201ENST00000390454 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
TRAV25-201ENST00000390454 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
TRAV25-201ENST00000390454 PKD1P98161 4303 aa2.95□□□□□ -1.94
TRAV25-201ENST00000390454 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
TRAV25-201ENST00000390454 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
TRAV25-201ENST00000390454 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
TRAV25-201ENST00000390454 DMBT1Q9UGM3 2413 aaPredicted RBP2.95□□□□□ -1.94
TRAV25-201ENST00000390454 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
TRAV25-201ENST00000390454 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
TRAV25-201ENST00000390454 Q5VSD8 79 aa2.9□□□□□ -1.95
TRAV25-201ENST00000390454 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
TRAV25-201ENST00000390454 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
TRAV25-201ENST00000390454 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
TRAV25-201ENST00000390454 APOBP04114 4563 aaKnown RBP2.87□□□□□ -1.95
TRAV25-201ENST00000390454 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
TRAV25-201ENST00000390454 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
TRAV25-201ENST00000390454 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
TRAV25-201ENST00000390454 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TRAV25-201ENST00000390454 TNXBP22105 4242 aa2.82□□□□□ -1.96
TRAV25-201ENST00000390454 HYDINQ4G0P3 5121 aa2.81□□□□□ -1.96
TRAV25-201ENST00000390454 LRP1Q07954 4544 aaKnown RBP2.8□□□□□ -1.96
TRAV25-201ENST00000390454 FAT3Q8TDW7 4589 aa2.8□□□□□ -1.96
TRAV25-201ENST00000390454 FAT1Q14517 4588 aa2.8□□□□□ -1.96
TRAV25-201ENST00000390454 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
TRAV25-201ENST00000390454 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
TRAV25-201ENST00000390454 INE1O15225 51 aa2.75□□□□□ -1.97
TRAV25-201ENST00000390454 HSPG2P98160 4391 aa2.75□□□□□ -1.97
TRAV25-201ENST00000390454 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TRAV25-201ENST00000390454 DNHD1Q96M86 4753 aa2.73□□□□□ -1.97
TRAV25-201ENST00000390454 TNP1P09430 55 aa2.71□□□□□ -1.98
TRAV25-201ENST00000390454 MYCBP2O75592 4640 aa2.68□□□□□ -1.98
TRAV25-201ENST00000390454 RYR2Q92736 4967 aa2.65□□□□□ -1.99
TRAV25-201ENST00000390454 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
TRAV25-201ENST00000390454 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
TRAV25-201ENST00000390454 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
TRAV25-201ENST00000390454 RYR1P21817 5038 aa2.62□□□□□ -1.99
TRAV25-201ENST00000390454 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
TRAV25-201ENST00000390454 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TRAV25-201ENST00000390454 LRP2P98164 4655 aa2.56□□□□□ -2
TRAV25-201ENST00000390454 KMT2CQ8NEZ4 4911 aaKnown RBP2.53□□□□□ -2
TRAV25-201ENST00000390454 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
TRAV25-201ENST00000390454 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
TRAV25-201ENST00000390454 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
TRAV25-201ENST00000390454 LPAP08519 4548 aa2.49□□□□□ -2.01
TRAV25-201ENST00000390454 RYR3Q15413 4870 aa2.49□□□□□ -2.01
TRAV25-201ENST00000390454 HERC1Q15751 4861 aa2.47□□□□□ -2.01
TRAV25-201ENST00000390454 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
TRAV25-201ENST00000390454 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 1851.2 ms