RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 PLAC8Q9NZF1 115 aa3.56□□□□□ -1.84
RTTN-218ENST00000640408 HRES1P13985 223 aa3.55□□□□□ -1.84
RTTN-218ENST00000640408 CSMD1Q96PZ7 3565 aa3.55□□□□□ -1.84
RTTN-218ENST00000640408 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
RTTN-218ENST00000640408 ZNF861PO60384 105 aa3.52□□□□□ -1.85
RTTN-218ENST00000640408 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
RTTN-218ENST00000640408 MEGF8Q7Z7M0 2845 aa3.52□□□□□ -1.85
RTTN-218ENST00000640408 KRTAP10-2P60368 255 aa3.51□□□□□ -1.85
RTTN-218ENST00000640408 A0A1B0GU33 70 aa3.51□□□□□ -1.85
RTTN-218ENST00000640408 KRTAP10-1P60331 282 aa3.51□□□□□ -1.85
RTTN-218ENST00000640408 CSMD2Q7Z408 3487 aa3.51□□□□□ -1.85
RTTN-218ENST00000640408 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
RTTN-218ENST00000640408 J3QL48 77 aa3.5□□□□□ -1.85
RTTN-218ENST00000640408 SPATA8Q6RVD6 105 aa3.5□□□□□ -1.85
RTTN-218ENST00000640408 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
RTTN-218ENST00000640408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.49□□□□□ -1.85
RTTN-218ENST00000640408 SEC61BP60468 96 aaKnown RBP3.49□□□□□ -1.85
RTTN-218ENST00000640408 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
RTTN-218ENST00000640408 PSORS1C2Q9UIG4 136 aa3.49□□□□□ -1.85
RTTN-218ENST00000640408 A0A1W2PNN7 141 aa3.49□□□□□ -1.85
RTTN-218ENST00000640408 AKAP9Q99996 3911 aa3.49□□□□□ -1.85
RTTN-218ENST00000640408 Q6ZSA8 131 aa3.48□□□□□ -1.85
RTTN-218ENST00000640408 Q96NJ1 140 aa3.48□□□□□ -1.85
RTTN-218ENST00000640408 MMP24-AS1A0A0U1RRL7 71 aa3.48□□□□□ -1.85
RTTN-218ENST00000640408 ROMO1P60602 79 aa3.48□□□□□ -1.85
RTTN-218ENST00000640408 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
RTTN-218ENST00000640408 Q8N1X5 172 aa3.47□□□□□ -1.85
RTTN-218ENST00000640408 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
RTTN-218ENST00000640408 Q5VSD8 79 aa3.46□□□□□ -1.86
RTTN-218ENST00000640408 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
RTTN-218ENST00000640408 DMBT1Q9UGM3 2413 aaPredicted RBP3.45□□□□□ -1.86
RTTN-218ENST00000640408 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
RTTN-218ENST00000640408 SPRR1AP35321 89 aa3.44□□□□□ -1.86
RTTN-218ENST00000640408 A0A0D9SG42 100 aa3.44□□□□□ -1.86
RTTN-218ENST00000640408 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
RTTN-218ENST00000640408 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
RTTN-218ENST00000640408 LINC00483Q53H64 154 aa3.42□□□□□ -1.86
RTTN-218ENST00000640408 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
RTTN-218ENST00000640408 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
RTTN-218ENST00000640408 FLG2Q5D862 2391 aaPredicted RBP3.41□□□□□ -1.86
RTTN-218ENST00000640408 A8MU10 97 aa3.41□□□□□ -1.86
RTTN-218ENST00000640408 LINC00304Q8N9R0 145 aa3.41□□□□□ -1.86
RTTN-218ENST00000640408 NDUFAF8A1L188 74 aa3.4□□□□□ -1.86
RTTN-218ENST00000640408 SPRR1BP22528 89 aa3.4□□□□□ -1.86
RTTN-218ENST00000640408 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
RTTN-218ENST00000640408 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
RTTN-218ENST00000640408 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
RTTN-218ENST00000640408 PANO1I0J062 215 aa3.38□□□□□ -1.87
RTTN-218ENST00000640408 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
RTTN-218ENST00000640408 Q8NDZ9 215 aa3.38□□□□□ -1.87
RTTN-218ENST00000640408 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
RTTN-218ENST00000640408 Q5W150 140 aa3.37□□□□□ -1.87
RTTN-218ENST00000640408 SVEP1Q4LDE5 3571 aa3.36□□□□□ -1.87
RTTN-218ENST00000640408 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
RTTN-218ENST00000640408 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
RTTN-218ENST00000640408 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.88
RTTN-218ENST00000640408 KRTAP13-1Q8IUC0 172 aa3.33□□□□□ -1.88
RTTN-218ENST00000640408 A8MUU9 505 aa3.32□□□□□ -1.88
RTTN-218ENST00000640408 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
RTTN-218ENST00000640408 COL7A1Q02388 2944 aa3.31□□□□□ -1.88
RTTN-218ENST00000640408 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
RTTN-218ENST00000640408 ANK2Q01484 3957 aa3.3□□□□□ -1.88
RTTN-218ENST00000640408 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
RTTN-218ENST00000640408 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
RTTN-218ENST00000640408 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
RTTN-218ENST00000640408 C9orf92A6NGG3 77 aa3.26□□□□□ -1.89
RTTN-218ENST00000640408 KRTAP11-1Q8IUC1 163 aa3.26□□□□□ -1.89
RTTN-218ENST00000640408 S4R3F8 94 aa3.25□□□□□ -1.89
RTTN-218ENST00000640408 VPS13CQ709C8 3753 aa3.24□□□□□ -1.89
RTTN-218ENST00000640408 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
RTTN-218ENST00000640408 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
RTTN-218ENST00000640408 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
RTTN-218ENST00000640408 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
RTTN-218ENST00000640408 CUBNO60494 3623 aa3.21□□□□□ -1.9
RTTN-218ENST00000640408 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
RTTN-218ENST00000640408 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
RTTN-218ENST00000640408 PLECQ15149 4684 aaKnown RBP3.19□□□□□ -1.9
RTTN-218ENST00000640408 PRKDCP78527 4128 aaKnown RBP3.18□□□□□ -1.9
RTTN-218ENST00000640408 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
RTTN-218ENST00000640408 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
RTTN-218ENST00000640408 TPRXLQ17RH7 258 aa3.16□□□□□ -1.9
RTTN-218ENST00000640408 DNAH3Q8TD57 4116 aa3.14□□□□□ -1.91
RTTN-218ENST00000640408 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
RTTN-218ENST00000640408 R4GN34 69 aa3.13□□□□□ -1.91
RTTN-218ENST00000640408 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
RTTN-218ENST00000640408 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
RTTN-218ENST00000640408 P0C880 135 aa3.11□□□□□ -1.91
RTTN-218ENST00000640408 M0QZ58 72 aa3.1□□□□□ -1.91
RTTN-218ENST00000640408 H0YAA0 97 aa3.1□□□□□ -1.91
RTTN-218ENST00000640408 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.91
RTTN-218ENST00000640408 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
RTTN-218ENST00000640408 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
RTTN-218ENST00000640408 KRTAP4-5Q9BYR2 181 aa3.07□□□□□ -1.92
RTTN-218ENST00000640408 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
RTTN-218ENST00000640408 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
RTTN-218ENST00000640408 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
RTTN-218ENST00000640408 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
RTTN-218ENST00000640408 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
RTTN-218ENST00000640408 RYR2Q92736 4967 aa3.06□□□□□ -1.92
RTTN-218ENST00000640408 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms