RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 RPS29P62273 56 aaKnown RBP0.62□□□□□ -2.31
ATM-230ENST00000640388 FAM74A4Q5TZK3 123 aa0.62□□□□□ -2.31
ATM-230ENST00000640388 C20orf197Q8N268 126 aa0.62□□□□□ -2.31
ATM-230ENST00000640388 COX7B2Q8TF08 81 aa0.62□□□□□ -2.31
ATM-230ENST00000640388 LSM10Q969L4 123 aaKnown RBP0.62□□□□□ -2.31
ATM-230ENST00000640388 GVQW2A0A096LPI5 108 aaPredicted RBP0.61□□□□□ -2.31
ATM-230ENST00000640388 LOC100130705A0A1B0GUX0 176 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 LINC00587B1AMM8 73 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 IFNGP01579 166 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 AKAIN1P0CW23 69 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 HMGN3Q15651 99 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 Q8N8P6 123 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 SPANXDQ9BXN6 97 aa0.61□□□□□ -2.31
ATM-230ENST00000640388 A0A087WWC5 75 aa0.6□□□□□ -2.31
ATM-230ENST00000640388 A0A0D9SG42 100 aa0.6□□□□□ -2.31
ATM-230ENST00000640388 LINC01590Q5TEZ4 76 aa0.6□□□□□ -2.31
ATM-230ENST00000640388 PPP3R2Q96LZ3 170 aa0.6□□□□□ -2.31
ATM-230ENST00000640388 SCN3BQ9NY72 215 aa0.6□□□□□ -2.31
ATM-230ENST00000640388 CORTO00230 105 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 SIX6O95475 246 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 UBE2D2P62837 147 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 WHAMMP3Q1A5X7 153 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 CGREF1Q99674 301 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 C10orf95Q9H7T3 257 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 V9GYV3 84 aa0.59□□□□□ -2.31
ATM-230ENST00000640388 TRAV13-2A0A0B4J235 113 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 TMEM262E9PQX1 116 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 BCE1O60756 84 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 S100A3P33764 101 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 GNG4P50150 75 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 MRPS10P82664 201 aaKnown RBP0.58□□□□□ -2.32
ATM-230ENST00000640388 C8orf59Q8N0T1 100 aaPredicted RBP0.58□□□□□ -2.32
ATM-230ENST00000640388 SPTSSBQ8NFR3 76 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 Q96NJ1 140 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 SCP2D1Q9UJQ7 156 aa0.58□□□□□ -2.32
ATM-230ENST00000640388 HCG22E2RYF7 251 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 F6UZH7 168 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 H3BQF6 201 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 S100A7L2Q5SY68 101 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 NPVFQ9HCQ7 196 aa0.57□□□□□ -2.32
ATM-230ENST00000640388 F2Z2F3 143 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 SSSCA1O60232 199 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 TRAPPC2P0DI81 140 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 TRAPPC2BP0DI82 140 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 SNRPGP62308 76 aaKnown RBP0.56□□□□□ -2.32
ATM-230ENST00000640388 CATR1Q13166 79 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 MRPL54Q6P161 138 aaKnown RBP0.56□□□□□ -2.32
ATM-230ENST00000640388 SMIM11BQ8TCY0 68 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 NDUFA4L2Q9NRX3 87 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 GNG8Q9UK08 70 aa0.56□□□□□ -2.32
ATM-230ENST00000640388 ATP5EP56381 51 aaPredicted RBP0.55□□□□□ -2.32
ATM-230ENST00000640388 PPP3R1P63098 170 aa0.55□□□□□ -2.32
ATM-230ENST00000640388 C5orf38Q86SI9 138 aa0.55□□□□□ -2.32
ATM-230ENST00000640388 AQP10Q96PS8 301 aa0.55□□□□□ -2.32
ATM-230ENST00000640388 CYP4F30PQ9H0H9 118 aa0.55□□□□□ -2.32
ATM-230ENST00000640388 R4GMQ9 66 aa0.55□□□□□ -2.32
ATM-230ENST00000640388 IGLC1P0CG04 106 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 S100PP25815 95 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 C9orf153Q5TBE3 101 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 CFAP126Q5VTH2 177 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 SPATA8Q6RVD6 105 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 PRR15LQ9BU68 103 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 LENEPQ9Y5L5 61 aa0.54□□□□□ -2.32
ATM-230ENST00000640388 UBE2L5PA0A1B0GUS4 154 aa0.53□□□□□ -2.32
ATM-230ENST00000640388 SNAPC5O75971 98 aa0.53□□□□□ -2.32
ATM-230ENST00000640388 ACYP2P14621 99 aa0.53□□□□□ -2.32
ATM-230ENST00000640388 UBE2L3P68036 154 aaKnown RBP0.53□□□□□ -2.32
ATM-230ENST00000640388 PRLHP81277 87 aa0.52□□□□□ -2.33
ATM-230ENST00000640388 BAGE3Q86Y29 109 aa0.52□□□□□ -2.33
ATM-230ENST00000640388 TRAV1-2A0A0B4J238 106 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 SMIM6P0DI80 62 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 S100A1P23297 94 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 SPINK7P58062 85 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 Q6ZRX8 168 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 SVBPQ8N300 66 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 MT1LQ93083 61 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 SPRR4Q96PI1 79 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 MGST2Q99735 147 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 TCEAL7Q9BRU2 100 aa0.51□□□□□ -2.33
ATM-230ENST00000640388 TRBV7-3A0A075B6L6 115 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 TRAV30A0A087WSZ9 112 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 CRYM-AS1A6NIL9 109 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 H3BQ15 152 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 PPP1R17O96001 155 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 IFITM1P13164 125 aa0.5□□□□□ -2.33
ATM-230ENST00000640388 GCHFRP30047 84 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 PKIAP61925 76 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 GTF2H5Q6ZYL4 71 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 C6orf201Q7Z4U5 140 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 C14orf144Q96I85 54 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 ARHGAP5-AS1Q96IT6 56 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 AMELXQ99217 191 aa0.49□□□□□ -2.33
ATM-230ENST00000640388 SPAG11BQ08648 103 aa0.48□□□□□ -2.33
ATM-230ENST00000640388 HSD52Q0P140 79 aa0.48□□□□□ -2.33
ATM-230ENST00000640388 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
ATM-230ENST00000640388 FAM167A-AS1Q96KT0 104 aa0.48□□□□□ -2.33
ATM-230ENST00000640388 C12orf57Q99622 126 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms