RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TRAV23DV6A0A075B6W5 121 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 A0A087WSZ3 146 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 BORCS7-ASMTA0A0B4J1R7 106 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 A0A1B0GUT8 65 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 TINCRA0A1B0GVN0 87 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 MAP1LC3B2A6NCE7 125 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 IGIPA6NJ69 53 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 H3BRM9 83 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 PFDN1O60925 122 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 MPC2O95563 127 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 SPINK8P0C7L1 97 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 CKS2P33552 79 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 GNG4P50150 75 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 CCL20P78556 96 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 RPL7L1Q6DKI1 246 aaKnown RBP0.38□□□□□ -2.35
VBP1-204ENST00000625964 CSAG1Q6PB30 78 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 SFTA2Q6UW10 78 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 MT1MQ8N339 61 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 PPP1R1CQ8WVI7 109 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 BORCS7Q96B45 105 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 MAP1LC3BQ9GZQ8 125 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 CYSLTR1Q9Y271 337 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 IGLV5-48A0A075B6I7 105 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 ZNF815PA8K554 130 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 SMIM13P0DJ93 91 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 PDE6GP18545 87 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 FXYD2P54710 66 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 AKR1C8PQ5T2L2 129 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 Q6JHZ5 121 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 SFT2D1Q8WV19 159 aa0.38□□□□□ -2.35
VBP1-204ENST00000625964 NXT2Q9NPJ8 142 aaKnown RBP0.38□□□□□ -2.35
VBP1-204ENST00000625964 HIGD1CA8MV81 97 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 LINC00587B1AMM8 73 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 NDUFC2O95298 119 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 C3orf79P0CE67 100 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 G0S2P27469 103 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 MEIG1Q5JSS6 88 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 TRIQKQ629K1 86 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 KCNRGQ8N5I3 272 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 Q9H521 79 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 SPANXB1Q9NS25 103 aaPredicted RBP0.37□□□□□ -2.35
VBP1-204ENST00000625964 SS18L2Q9UHA2 77 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 V9GYH0 126 aa0.37□□□□□ -2.35
VBP1-204ENST00000625964 A0A1B0GV50 99 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 F8WEM9 126 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 K7EMI3 77 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 IGLC3P0DOY3 106 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 ADCYAP1P18509 176 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 COX7BP24311 80 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 ELOF1P60002 83 aaKnown RBP0.36□□□□□ -2.35
VBP1-204ENST00000625964 OCIAD2Q56VL3 154 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 Q8N8P6 123 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 PRELID3AQ96N28 172 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 SCGB3A1Q96QR1 104 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 SIGMAR1Q99720 223 aa0.36□□□□□ -2.35
VBP1-204ENST00000625964 NHP2Q9NX24 153 aaKnown RBP0.36□□□□□ -2.35
VBP1-204ENST00000625964 TRAV13-2A0A0B4J235 113 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 TRBV7-6A0A0J9YX20 115 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 LINC01549A6NIU2 74 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 LYRM1O43325 122 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 PDE6DO43924 150 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 S100A8P05109 93 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 IL7P13232 177 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 S100A5P33763 92 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 RHEBQ15382 184 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 SLC51BQ86UW2 128 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 COMMD7Q86VX2 200 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 OR13C6PQ8NH95 151 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 FAM213BQ8TBF2 198 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 MT1LQ93083 61 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 DSCR8Q96T75 97 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 MAP1LC3AQ9H492 121 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 MANBALQ9NQG1 85 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 GNG13Q9P2W3 67 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 NAT8BQ9UHF3 227 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 LAMTOR2Q9Y2Q5 125 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 S4R3F8 94 aa0.35□□□□□ -2.35
VBP1-204ENST00000625964 UMAD1C9J7I0 102 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 PHGR1C9JFL3 82 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 KRTAP19-5Q3LI72 72 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 TMEM170BQ5T4T1 132 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 LYRM7Q5U5X0 104 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 TEN1Q86WV5 123 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 OSTCQ9NRP0 149 aa0.34□□□□□ -2.35
VBP1-204ENST00000625964 MYMXA0A1B0GTQ4 84 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SMIM27A0A1W2PRY6 76 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 K7EQZ3 153 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SSNA1O43805 119 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 HBDP02042 147 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 FABP9Q0Z7S8 132 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 MRPL54Q6P161 138 aaKnown RBP0.33□□□□□ -2.36
VBP1-204ENST00000625964 RAB37Q96AX2 223 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SPANXDQ9BXN6 97 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SPANXCQ9NY87 97 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 V9GYV3 84 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 HSBP1L1C9JCN9 74 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms