RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
SRRT-216ENST00000618262 Q8IZM0 81 aa7.51□□□□□ -1.21
SRRT-216ENST00000618262 GVQW2A0A096LPI5 108 aaPredicted RBP7.51□□□□□ -1.21
SRRT-216ENST00000618262 A8MWP4 228 aa7.5□□□□□ -1.21
SRRT-216ENST00000618262 PANO1I0J062 215 aa7.5□□□□□ -1.21
SRRT-216ENST00000618262 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
SRRT-216ENST00000618262 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
SRRT-216ENST00000618262 H3BPC8 53 aa7.48□□□□□ -1.21
SRRT-216ENST00000618262 A0A096LNI7 61 aa7.47□□□□□ -1.21
SRRT-216ENST00000618262 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.22
SRRT-216ENST00000618262 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
SRRT-216ENST00000618262 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
SRRT-216ENST00000618262 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
SRRT-216ENST00000618262 DYNC1H1Q14204 4646 aaKnown RBP7.43□□□□□ -1.22
SRRT-216ENST00000618262 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
SRRT-216ENST00000618262 C14orf177Q52M58 125 aa7.43□□□□□ -1.22
SRRT-216ENST00000618262 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
SRRT-216ENST00000618262 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
SRRT-216ENST00000618262 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
SRRT-216ENST00000618262 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
SRRT-216ENST00000618262 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
SRRT-216ENST00000618262 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
SRRT-216ENST00000618262 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
SRRT-216ENST00000618262 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
SRRT-216ENST00000618262 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.23
SRRT-216ENST00000618262 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
SRRT-216ENST00000618262 FAT1Q14517 4588 aa7.38□□□□□ -1.23
SRRT-216ENST00000618262 K7EQZ3 153 aa7.37□□□□□ -1.23
SRRT-216ENST00000618262 K7ERS5 55 aa7.37□□□□□ -1.23
SRRT-216ENST00000618262 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
SRRT-216ENST00000618262 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
SRRT-216ENST00000618262 DSCR10P59022 87 aa7.36□□□□□ -1.23
SRRT-216ENST00000618262 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
SRRT-216ENST00000618262 IGLV1-50A0A075B6I6 118 aa7.35□□□□□ -1.23
SRRT-216ENST00000618262 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
SRRT-216ENST00000618262 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
SRRT-216ENST00000618262 KRTAP11-1Q8IUC1 163 aa7.33□□□□□ -1.24
SRRT-216ENST00000618262 COX17Q14061 63 aa7.32□□□□□ -1.24
SRRT-216ENST00000618262 APOBP04114 4563 aaKnown RBP7.31□□□□□ -1.24
SRRT-216ENST00000618262 DEFB116Q30KQ4 102 aa7.31□□□□□ -1.24
SRRT-216ENST00000618262 SPACA4Q8TDM5 124 aa7.31□□□□□ -1.24
SRRT-216ENST00000618262 ZNF861PO60384 105 aa7.3□□□□□ -1.24
SRRT-216ENST00000618262 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
SRRT-216ENST00000618262 WFDC13Q8IUB5 93 aa7.3□□□□□ -1.24
SRRT-216ENST00000618262 C7orf33Q8WU49 177 aa7.29□□□□□ -1.24
SRRT-216ENST00000618262 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
SRRT-216ENST00000618262 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
SRRT-216ENST00000618262 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
SRRT-216ENST00000618262 A8MUU9 505 aa7.27□□□□□ -1.25
SRRT-216ENST00000618262 HRES1P13985 223 aa7.25□□□□□ -1.25
SRRT-216ENST00000618262 HSPG2P98160 4391 aa7.24□□□□□ -1.25
SRRT-216ENST00000618262 PRLHP81277 87 aa7.23□□□□□ -1.25
SRRT-216ENST00000618262 DHRS4-AS1Q9P1J3 65 aa7.23□□□□□ -1.25
SRRT-216ENST00000618262 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
SRRT-216ENST00000618262 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
SRRT-216ENST00000618262 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
SRRT-216ENST00000618262 UQCR11O14957 56 aa7.22□□□□□ -1.25
SRRT-216ENST00000618262 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
SRRT-216ENST00000618262 DEFB105AQ8NG35 78 aa7.21□□□□□ -1.25
SRRT-216ENST00000618262 RYR1P21817 5038 aa7.21□□□□□ -1.25
SRRT-216ENST00000618262 C1orf137Q5JT78 98 aa7.21□□□□□ -1.26
SRRT-216ENST00000618262 Q6ZSA8 131 aa7.21□□□□□ -1.26
SRRT-216ENST00000618262 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
SRRT-216ENST00000618262 PCOTHQ58A44 107 aa7.2□□□□□ -1.26
SRRT-216ENST00000618262 PSORS1C2Q9UIG4 136 aa7.2□□□□□ -1.26
SRRT-216ENST00000618262 A0A087WSZ3 146 aa7.19□□□□□ -1.26
SRRT-216ENST00000618262 Q8NBF4 154 aa7.19□□□□□ -1.26
SRRT-216ENST00000618262 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
SRRT-216ENST00000618262 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
SRRT-216ENST00000618262 A0A1B0GU69 56 aa7.17□□□□□ -1.26
SRRT-216ENST00000618262 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
SRRT-216ENST00000618262 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
SRRT-216ENST00000618262 MYCBP2O75592 4640 aa7.16□□□□□ -1.26
SRRT-216ENST00000618262 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
SRRT-216ENST00000618262 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
SRRT-216ENST00000618262 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
SRRT-216ENST00000618262 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
SRRT-216ENST00000618262 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
SRRT-216ENST00000618262 RPL37AP61513 92 aaKnown RBP7.11□□□□□ -1.27
SRRT-216ENST00000618262 Q5VSD8 79 aa7.1□□□□□ -1.27
SRRT-216ENST00000618262 Q8N377 158 aa7.1□□□□□ -1.27
SRRT-216ENST00000618262 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
SRRT-216ENST00000618262 Q5W150 140 aa7.07□□□□□ -1.28
SRRT-216ENST00000618262 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
SRRT-216ENST00000618262 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
SRRT-216ENST00000618262 Q6ZRX8 168 aa7.06□□□□□ -1.28
SRRT-216ENST00000618262 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
SRRT-216ENST00000618262 SPRR1AP35321 89 aa7.03□□□□□ -1.28
SRRT-216ENST00000618262 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
SRRT-216ENST00000618262 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
SRRT-216ENST00000618262 HERC2O95714 4834 aa7.01□□□□□ -1.29
SRRT-216ENST00000618262 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
SRRT-216ENST00000618262 KRTAP10-4P60372 401 aaPredicted RBP6.99□□□□□ -1.29
SRRT-216ENST00000618262 ACYP2P14621 99 aa6.99□□□□□ -1.29
SRRT-216ENST00000618262 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
SRRT-216ENST00000618262 Q8N1X5 172 aa6.98□□□□□ -1.29
SRRT-216ENST00000618262 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
SRRT-216ENST00000618262 CRIPTQ9P021 101 aa6.96□□□□□ -1.29
SRRT-216ENST00000618262 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
SRRT-216ENST00000618262 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms