RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 IGKCP01834 107 aa3.44□□□□□ -1.86
LINC01396-201ENST00000609099 PET117Q6UWS5 81 aa3.44□□□□□ -1.86
LINC01396-201ENST00000609099 SPANXDQ9BXN6 97 aa3.44□□□□□ -1.86
LINC01396-201ENST00000609099 KRTDAPP60985 99 aa3.43□□□□□ -1.86
LINC01396-201ENST00000609099 SNRPEP62304 92 aaKnown RBP3.43□□□□□ -1.86
LINC01396-201ENST00000609099 OCIAD2Q56VL3 154 aa3.43□□□□□ -1.86
LINC01396-201ENST00000609099 LITAFQ99732 161 aa3.43□□□□□ -1.86
LINC01396-201ENST00000609099 E9PLD3 99 aa3.42□□□□□ -1.86
LINC01396-201ENST00000609099 LEPROTO15243 131 aa3.42□□□□□ -1.86
LINC01396-201ENST00000609099 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
LINC01396-201ENST00000609099 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
LINC01396-201ENST00000609099 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 A4D1N5 150 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 J3QQQ9 107 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 MT1XP80297 61 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
LINC01396-201ENST00000609099 SPANXCQ9NY87 97 aa3.41□□□□□ -1.86
LINC01396-201ENST00000609099 S100A6P06703 90 aa3.4□□□□□ -1.87
LINC01396-201ENST00000609099 LINC00518Q8N0U6 118 aa3.4□□□□□ -1.87
LINC01396-201ENST00000609099 ATOH7Q8N100 152 aa3.4□□□□□ -1.87
LINC01396-201ENST00000609099 MT4P47944 62 aa3.39□□□□□ -1.87
LINC01396-201ENST00000609099 HERVK_113P61574 105 aa3.39□□□□□ -1.87
LINC01396-201ENST00000609099 SCGB1D1O95968 90 aa3.38□□□□□ -1.87
LINC01396-201ENST00000609099 S100A2P29034 98 aa3.38□□□□□ -1.87
LINC01396-201ENST00000609099 SVIPQ8NHG7 77 aa3.38□□□□□ -1.87
LINC01396-201ENST00000609099 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
LINC01396-201ENST00000609099 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
LINC01396-201ENST00000609099 LINC00308Q8TCZ7 52 aa3.37□□□□□ -1.87
LINC01396-201ENST00000609099 H3BUT2 72 aa3.36□□□□□ -1.87
LINC01396-201ENST00000609099 TRIAP1O43715 76 aa3.36□□□□□ -1.87
LINC01396-201ENST00000609099 TIMM17BO60830 172 aa3.35□□□□□ -1.87
LINC01396-201ENST00000609099 A0A087WSZ3 146 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 IGKV4-1P06312 121 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 PYY3Q5JQD4 70 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 TEN1Q86WV5 123 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 DSCR8Q96T75 97 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 SNHG12Q9BXW3 62 aa3.34□□□□□ -1.87
LINC01396-201ENST00000609099 IGHV6-1A0A0B4J1U7 121 aa3.33□□□□□ -1.88
LINC01396-201ENST00000609099 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
LINC01396-201ENST00000609099 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
LINC01396-201ENST00000609099 LYRM7Q5U5X0 104 aa3.33□□□□□ -1.88
LINC01396-201ENST00000609099 COX8AP10176 69 aa3.32□□□□□ -1.88
LINC01396-201ENST00000609099 C5orf47Q569G3 176 aa3.32□□□□□ -1.88
LINC01396-201ENST00000609099 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
LINC01396-201ENST00000609099 DLEU1O43261 78 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 VAMP3Q15836 100 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 SCGB1D4Q6XE38 83 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 C2orf91Q6ZV80 131 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 PRR15Q8IV56 129 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 PAM16Q9Y3D7 125 aa3.31□□□□□ -1.88
LINC01396-201ENST00000609099 A6NDN8 102 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 HSBP1L1C9JCN9 74 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 SPATA45Q537H7 98 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 Q6ZQY7 126 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 MUSTN1Q8IVN3 82 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 C14orf144Q96I85 54 aa3.3□□□□□ -1.88
LINC01396-201ENST00000609099 IFITM1P13164 125 aa3.29□□□□□ -1.88
LINC01396-201ENST00000609099 VAMP8Q9BV40 100 aa3.29□□□□□ -1.88
LINC01396-201ENST00000609099 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
LINC01396-201ENST00000609099 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
LINC01396-201ENST00000609099 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
LINC01396-201ENST00000609099 C8orf87E5RJ46 101 aa3.28□□□□□ -1.88
LINC01396-201ENST00000609099 PPDPFLQ8WWR9 84 aa3.28□□□□□ -1.88
LINC01396-201ENST00000609099 HIGD1BQ9P298 99 aa3.28□□□□□ -1.88
LINC01396-201ENST00000609099 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
LINC01396-201ENST00000609099 LCA10Q71F78 164 aa3.27□□□□□ -1.89
LINC01396-201ENST00000609099 MT3P25713 68 aa3.26□□□□□ -1.89
LINC01396-201ENST00000609099 DEFB116Q30KQ4 102 aa3.26□□□□□ -1.89
LINC01396-201ENST00000609099 LINC00575Q6W349 94 aa3.26□□□□□ -1.89
LINC01396-201ENST00000609099 SMIM11BQ8TCY0 68 aa3.26□□□□□ -1.89
LINC01396-201ENST00000609099 SMIM6P0DI80 62 aa3.25□□□□□ -1.89
LINC01396-201ENST00000609099 COPS9Q8WXC6 57 aa3.25□□□□□ -1.89
LINC01396-201ENST00000609099 C12orf57Q99622 126 aa3.25□□□□□ -1.89
LINC01396-201ENST00000609099 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
LINC01396-201ENST00000609099 IGKV3D-7A0A0C4DH55 119 aa3.24□□□□□ -1.89
LINC01396-201ENST00000609099 FXYD2P54710 66 aa3.24□□□□□ -1.89
LINC01396-201ENST00000609099 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
LINC01396-201ENST00000609099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.23□□□□□ -1.89
LINC01396-201ENST00000609099 CEND1Q8N111 149 aa3.23□□□□□ -1.89
LINC01396-201ENST00000609099 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
LINC01396-201ENST00000609099 UQCR10Q9UDW1 63 aa3.23□□□□□ -1.89
LINC01396-201ENST00000609099 A0A0B4J2C4 111 aa3.22□□□□□ -1.89
LINC01396-201ENST00000609099 HSD52Q0P140 79 aa3.22□□□□□ -1.89
LINC01396-201ENST00000609099 RAB37Q96AX2 223 aa3.22□□□□□ -1.89
LINC01396-201ENST00000609099 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
LINC01396-201ENST00000609099 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
LINC01396-201ENST00000609099 K7ERJ3 54 aa3.21□□□□□ -1.9
LINC01396-201ENST00000609099 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
LINC01396-201ENST00000609099 A0A1B0GVX0 72 aa3.2□□□□□ -1.9
LINC01396-201ENST00000609099 BVES-AS1Q5T3Y7 98 aa3.19□□□□□ -1.9
LINC01396-201ENST00000609099 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
LINC01396-201ENST00000609099 PRO1854Q9UHT4 67 aa3.18□□□□□ -1.9
LINC01396-201ENST00000609099 PDE6GP18545 87 aa3.17□□□□□ -1.9
LINC01396-201ENST00000609099 S4R3F8 94 aa3.17□□□□□ -1.9
LINC01396-201ENST00000609099 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
LINC01396-201ENST00000609099 TSTD3H0UI37 97 aa3.14□□□□□ -1.91
LINC01396-201ENST00000609099 H3BMG7 143 aa3.14□□□□□ -1.91
LINC01396-201ENST00000609099 SNCGO76070 127 aa3.14□□□□□ -1.91
LINC01396-201ENST00000609099 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms