RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
VMP1-215ENST00000592619 LINC00846Q9NV44 126 aa3.27□□□□□ -1.89
VMP1-215ENST00000592619 LYSTQ99698 3801 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 TENM3Q9P273 2699 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
VMP1-215ENST00000592619 DNAH1Q9P2D7 4330 aa3.25□□□□□ -1.89
VMP1-215ENST00000592619 HRES1P13985 223 aa3.25□□□□□ -1.89
VMP1-215ENST00000592619 CCL18P55774 89 aa3.25□□□□□ -1.89
VMP1-215ENST00000592619 STAB2Q8WWQ8 2551 aa3.24□□□□□ -1.89
VMP1-215ENST00000592619 IGKV2-40A0A087WW87 121 aaPredicted RBP3.24□□□□□ -1.89
VMP1-215ENST00000592619 IGKV2D-40P01614 121 aaPredicted RBP3.24□□□□□ -1.89
VMP1-215ENST00000592619 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
VMP1-215ENST00000592619 TMEM263Q8WUH6 116 aaKnown RBP3.24□□□□□ -1.89
VMP1-215ENST00000592619 ALMS1Q8TCU4 4167 aa3.24□□□□□ -1.89
VMP1-215ENST00000592619 A0A087WVE0 104 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 IGKV3OR2-268A0A0C4DH90 116 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 TRBV6-1A0A0K0K1D8 114 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 A0A1B0GUT8 65 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 DEFB4AO15263 64 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 TXNDC17Q9BRA2 123 aa3.23□□□□□ -1.89
VMP1-215ENST00000592619 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
VMP1-215ENST00000592619 TRAV21A0A0B4J279 112 aa3.22□□□□□ -1.89
VMP1-215ENST00000592619 IGKV2-24A0A0C4DH68 120 aa3.22□□□□□ -1.89
VMP1-215ENST00000592619 TRBV6-4A0A1B0GX49 114 aa3.22□□□□□ -1.89
VMP1-215ENST00000592619 NDUFB1O75438 58 aa3.22□□□□□ -1.89
VMP1-215ENST00000592619 TIMM8BQ9Y5J9 83 aaPredicted RBP3.22□□□□□ -1.89
VMP1-215ENST00000592619 UQCR11O14957 56 aa3.21□□□□□ -1.9
VMP1-215ENST00000592619 HTN1P15515 57 aa3.21□□□□□ -1.9
VMP1-215ENST00000592619 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 DEFB131BA0A096LNP1 70 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 JMJD7-PLA2G4BH0Y9G9 81 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 DNAL4O96015 105 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 MGPP08493 103 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 SPRR4Q96PI1 79 aa3.2□□□□□ -1.9
VMP1-215ENST00000592619 NOP10Q9NPE3 64 aaKnown RBP3.2□□□□□ -1.9
VMP1-215ENST00000592619 LCE6AA0A183 80 aa3.19□□□□□ -1.9
VMP1-215ENST00000592619 SPINK4O60575 86 aa3.19□□□□□ -1.9
VMP1-215ENST00000592619 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
VMP1-215ENST00000592619 DEFB130BP0DP73 79 aa3.19□□□□□ -1.9
VMP1-215ENST00000592619 DEFB130AP0DP74 79 aa3.19□□□□□ -1.9
VMP1-215ENST00000592619 DNAH2Q9P225 4427 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 TRGV1A0A0A0MS02 117 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 A0A1W2PNN7 141 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 H3BNG1 76 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 CRIP1P50238 77 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 V9GYV3 84 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 KMT2AQ03164 3969 aa3.18□□□□□ -1.9
VMP1-215ENST00000592619 TENM2Q9NT68 2774 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 HTN3P15516 51 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 NREPQ16612 68 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
VMP1-215ENST00000592619 NBDYA0A0U1RRE5 68 aa3.16□□□□□ -1.9
VMP1-215ENST00000592619 RNASE3P12724 160 aaKnown RBP3.16□□□□□ -1.9
VMP1-215ENST00000592619 OBSCN-AS1Q96MR7 158 aa3.16□□□□□ -1.9
VMP1-215ENST00000592619 PRO0255Q9UI72 69 aa3.16□□□□□ -1.9
VMP1-215ENST00000592619 FRAS1Q86XX4 4008 aa3.16□□□□□ -1.9
VMP1-215ENST00000592619 DNAH10Q8IVF4 4471 aa3.15□□□□□ -1.9
VMP1-215ENST00000592619 A0A087WTM6 91 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 H0Y9P7 68 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 LY6G6CO95867 125 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 FCER1GP30273 86 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 LINC00208Q96KT6 92 aa3.15□□□□□ -1.91
VMP1-215ENST00000592619 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
VMP1-215ENST00000592619 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
VMP1-215ENST00000592619 ZCCHC13Q8WW36 166 aaKnown RBP3.14□□□□□ -1.91
VMP1-215ENST00000592619 DNAH17Q9UFH2 4485 aa3.14□□□□□ -1.91
VMP1-215ENST00000592619 FAT2Q9NYQ8 4349 aa3.14□□□□□ -1.91
VMP1-215ENST00000592619 A0A096LPF7 62 aa3.13□□□□□ -1.91
VMP1-215ENST00000592619 SMIM27A0A1W2PRY6 76 aa3.13□□□□□ -1.91
VMP1-215ENST00000592619 UBE2DNLQ8IWF7 75 aa3.13□□□□□ -1.91
VMP1-215ENST00000592619 SPINK7P58062 85 aa3.12□□□□□ -1.91
VMP1-215ENST00000592619 CNFNQ9BYD5 112 aa3.12□□□□□ -1.91
VMP1-215ENST00000592619 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
VMP1-215ENST00000592619 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
VMP1-215ENST00000592619 COX17Q14061 63 aa3.11□□□□□ -1.91
VMP1-215ENST00000592619 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
VMP1-215ENST00000592619 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
VMP1-215ENST00000592619 RPL37AP61513 92 aaKnown RBP3.1□□□□□ -1.91
VMP1-215ENST00000592619 ENHOQ6UWT2 76 aa3.1□□□□□ -1.91
VMP1-215ENST00000592619 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
VMP1-215ENST00000592619 PKD1P98161 4303 aa3.1□□□□□ -1.91
VMP1-215ENST00000592619 DYNC1H1Q14204 4646 aaKnown RBP3.09□□□□□ -1.91
VMP1-215ENST00000592619 LELP1Q5T871 98 aa3.09□□□□□ -1.91
VMP1-215ENST00000592619 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
VMP1-215ENST00000592619 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
VMP1-215ENST00000592619 M0QY20 66 aa3.08□□□□□ -1.92
VMP1-215ENST00000592619 LINC01556Q5JQF7 62 aa3.08□□□□□ -1.92
VMP1-215ENST00000592619 LINC00472Q9H8W2 130 aa3.08□□□□□ -1.92
VMP1-215ENST00000592619 IGKV2-29A2NJV5 120 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms