RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 CSNK1G2-AS1Q8NCQ2 148 aa6.75□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 LINC00472Q9H8W2 130 aa6.74□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 GVQW2A0A096LPI5 108 aaPredicted RBP6.74□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 SPINK1P00995 79 aa6.72□□□□□ -1.33
CCDC144NL-AS1-218ENST00000583962 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 STAB2Q8WWQ8 2551 aa6.7□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 NUPR2A6NF83 97 aa6.68□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 IGLV7-43P04211 117 aa6.66□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 J3QL48 77 aa6.66□□□□□ -1.34
CCDC144NL-AS1-218ENST00000583962 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 PRLHP81277 87 aa6.64□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 DEFB135Q30KP9 77 aa6.63□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 CMYA5Q8N3K9 4069 aa6.63□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 LELP1Q5T871 98 aa6.6□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 A0A087WTM6 91 aa6.59□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 Q5W150 140 aa6.59□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 C15orf56Q8N910 161 aa6.59□□□□□ -1.35
CCDC144NL-AS1-218ENST00000583962 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 MRPL34Q9BQ48 92 aaKnown RBP6.57□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 Q96NJ1 140 aa6.55□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
CCDC144NL-AS1-218ENST00000583962 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 SPRR1AP35321 89 aa6.51□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 DNAH9Q9NYC9 4486 aa6.51□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 LY6G6CO95867 125 aa6.5□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 A0A1B0GVX0 72 aa6.46□□□□□ -1.37
CCDC144NL-AS1-218ENST00000583962 H0YAA0 97 aa6.46□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 NBDYA0A0U1RRE5 68 aa6.44□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 A0A1B0GU33 70 aa6.41□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 Q6ZSA8 131 aa6.41□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 PANO1I0J062 215 aa6.41□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.38
CCDC144NL-AS1-218ENST00000583962 APLNQ9ULZ1 77 aa6.38□□□□□ -1.39
CCDC144NL-AS1-218ENST00000583962 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
CCDC144NL-AS1-218ENST00000583962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.34□□□□□ -1.39
CCDC144NL-AS1-218ENST00000583962 Q8N1X5 172 aa6.32□□□□□ -1.4
CCDC144NL-AS1-218ENST00000583962 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
CCDC144NL-AS1-218ENST00000583962 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
CCDC144NL-AS1-218ENST00000583962 A0A0D9SG42 100 aa6.27□□□□□ -1.4
CCDC144NL-AS1-218ENST00000583962 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 TYMSOSQ8TAI1 123 aa6.27□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 H3BNG1 76 aa6.23□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 STARD9Q9P2P6 4700 aa6.23□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 LINC01556Q5JQF7 62 aa6.23□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 ANAPC11Q9NYG5 84 aa6.22□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 RYR3Q15413 4870 aa6.22□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 DNAH7Q8WXX0 4024 aa6.21□□□□□ -1.41
CCDC144NL-AS1-218ENST00000583962 SPRR1BP22528 89 aa6.2□□□□□ -1.42
CCDC144NL-AS1-218ENST00000583962 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
CCDC144NL-AS1-218ENST00000583962 RYR2Q92736 4967 aa6.19□□□□□ -1.42
CCDC144NL-AS1-218ENST00000583962 SACSQ9NZJ4 4579 aa6.19□□□□□ -1.42
CCDC144NL-AS1-218ENST00000583962 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
CCDC144NL-AS1-218ENST00000583962 DNAH1Q9P2D7 4330 aa6.14□□□□□ -1.43
CCDC144NL-AS1-218ENST00000583962 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
CCDC144NL-AS1-218ENST00000583962 KRTAP1-5Q9BYS1 174 aa6.1□□□□□ -1.43
CCDC144NL-AS1-218ENST00000583962 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
CCDC144NL-AS1-218ENST00000583962 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
CCDC144NL-AS1-218ENST00000583962 COX6B2Q6YFQ2 88 aa6.07□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 VPS13DQ5THJ4 4388 aa6.05□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 LYSTQ99698 3801 aa6.04□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
CCDC144NL-AS1-218ENST00000583962 Q6ZRN7 208 aaPredicted RBP6.01□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 KMT2AQ03164 3969 aa6□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
CCDC144NL-AS1-218ENST00000583962 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
CCDC144NL-AS1-218ENST00000583962 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
CCDC144NL-AS1-218ENST00000583962 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
CCDC144NL-AS1-218ENST00000583962 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
CCDC144NL-AS1-218ENST00000583962 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms