RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
VPS35P1-201ENST00000563400 UNQ6190/PRO20217Q6UXQ8 127 aa2.81□□□□□ -1.96
VPS35P1-201ENST00000563400 C22orf24Q9Y442 160 aa2.81□□□□□ -1.96
VPS35P1-201ENST00000563400 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
VPS35P1-201ENST00000563400 HUWE1Q7Z6Z7 4374 aaKnown RBP2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 TEX49A0A1B0GTD5 131 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 A8MU10 97 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 COX6CP09669 75 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 PLAC8Q9NZF1 115 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 TENM2Q9NT68 2774 aa2.8□□□□□ -1.96
VPS35P1-201ENST00000563400 CYP4F30PQ9H0H9 118 aa2.79□□□□□ -1.96
VPS35P1-201ENST00000563400 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
VPS35P1-201ENST00000563400 C6orf48Q9UBA6 75 aa2.79□□□□□ -1.96
VPS35P1-201ENST00000563400 IGKV2-28A0A075B6P5 120 aa2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 IGKV2D-28P01615 120 aa2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 RPL37AP61513 92 aaKnown RBP2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 Q6ZSA8 131 aa2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 ZNF625Q96I27 306 aaPredicted RBP2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 SPCS1Q9Y6A9 102 aa2.78□□□□□ -1.96
VPS35P1-201ENST00000563400 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 IGLV6-57P01721 117 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 SMIM13P0DJ93 91 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 KRTAP10-12P60413 245 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 BVES-AS1Q5T3Y7 98 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.97
VPS35P1-201ENST00000563400 A0A096LNI7 61 aa2.77□□□□□ -1.97
VPS35P1-201ENST00000563400 COX8AP10176 69 aa2.77□□□□□ -1.97
VPS35P1-201ENST00000563400 ETDBQ3ZM63 59 aa2.77□□□□□ -1.97
VPS35P1-201ENST00000563400 SPATA45Q537H7 98 aa2.77□□□□□ -1.97
VPS35P1-201ENST00000563400 HIGD1BQ9P298 99 aa2.77□□□□□ -1.97
VPS35P1-201ENST00000563400 KMT2CQ8NEZ4 4911 aaKnown RBP2.76□□□□□ -1.97
VPS35P1-201ENST00000563400 H0YGX0 51 aa2.76□□□□□ -1.97
VPS35P1-201ENST00000563400 KRTAP10-1P60331 282 aa2.76□□□□□ -1.97
VPS35P1-201ENST00000563400 BCE1O60756 84 aa2.75□□□□□ -1.97
VPS35P1-201ENST00000563400 WFDC2Q14508 124 aa2.75□□□□□ -1.97
VPS35P1-201ENST00000563400 LINC00308Q8TCZ7 52 aa2.75□□□□□ -1.97
VPS35P1-201ENST00000563400 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
VPS35P1-201ENST00000563400 Q5VSD8 79 aa2.74□□□□□ -1.97
VPS35P1-201ENST00000563400 RYR3Q15413 4870 aa2.74□□□□□ -1.97
VPS35P1-201ENST00000563400 TRAV23DV6A0A075B6W5 121 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 TRAV22A0A0B4J277 110 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 A0A1W2PPM0 123 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 H7BZZ5 65 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 NDUFC1O43677 76 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 DNAL4O96015 105 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 Q5VV11 94 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 KCNQ1DNQ9H478 68 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 F8WEM9 126 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 MUSTN1Q8IVN3 82 aa2.73□□□□□ -1.97
VPS35P1-201ENST00000563400 CHKB-CPT1BH3BT56 60 aa2.72□□□□□ -1.97
VPS35P1-201ENST00000563400 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
VPS35P1-201ENST00000563400 COX7BP24311 80 aa2.72□□□□□ -1.97
VPS35P1-201ENST00000563400 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
VPS35P1-201ENST00000563400 CSMD3Q7Z407 3707 aa2.72□□□□□ -1.97
VPS35P1-201ENST00000563400 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.98
VPS35P1-201ENST00000563400 NCR3O14931 201 aa2.7□□□□□ -1.98
VPS35P1-201ENST00000563400 Q6ZRX8 168 aa2.7□□□□□ -1.98
VPS35P1-201ENST00000563400 STARD9Q9P2P6 4700 aa2.7□□□□□ -1.98
VPS35P1-201ENST00000563400 BIRC6Q9NR09 4857 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 JMJD7-PLA2G4BH0Y9G9 81 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 PDE6GP18545 87 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 C20orf197Q8N268 126 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 PRO0461Q9UI25 63 aa2.69□□□□□ -1.98
VPS35P1-201ENST00000563400 SPRR1AP35321 89 aa2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 PLECQ15149 4684 aaKnown RBP2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 H3BUT2 72 aa2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 ELOF1P60002 83 aaKnown RBP2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 Q6JHZ5 121 aa2.68□□□□□ -1.98
VPS35P1-201ENST00000563400 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
VPS35P1-201ENST00000563400 SPINK1P00995 79 aa2.67□□□□□ -1.98
VPS35P1-201ENST00000563400 LINC01600Q96MT4 127 aa2.67□□□□□ -1.98
VPS35P1-201ENST00000563400 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
VPS35P1-201ENST00000563400 ATXN8Q156A1 80 aa2.66□□□□□ -1.98
VPS35P1-201ENST00000563400 IGFL1Q6UW32 110 aa2.66□□□□□ -1.98
VPS35P1-201ENST00000563400 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
VPS35P1-201ENST00000563400 EPPK1P58107 5090 aaKnown RBP2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 PRLHP81277 87 aa2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 KLKP1Q107X0 134 aa2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
VPS35P1-201ENST00000563400 LYSTQ99698 3801 aa2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 KRTAP10-8P60410 259 aa2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 RPS29P62273 56 aaKnown RBP2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 LINC00575Q6W349 94 aa2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 RYR2Q92736 4967 aa2.64□□□□□ -1.99
VPS35P1-201ENST00000563400 HAMPP81172 84 aa2.63□□□□□ -1.99
VPS35P1-201ENST00000563400 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
VPS35P1-201ENST00000563400 COA5Q86WW8 74 aa2.63□□□□□ -1.99
VPS35P1-201ENST00000563400 LINC00304Q8N9R0 145 aa2.63□□□□□ -1.99
VPS35P1-201ENST00000563400 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
VPS35P1-201ENST00000563400 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms