RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	TMEM256-PLSCR3	K7ERE1	68 aa		4.69	□□□□□ -1.66
PABPN1-208	ENST00000557702	CD164	Q04900	197 aa		4.69	□□□□□ -1.66
PABPN1-208	ENST00000557702		Q5XG85	94 aa		4.69	□□□□□ -1.66
PABPN1-208	ENST00000557702	IGLV5-48	A0A075B6I7	105 aa		4.68	□□□□□ -1.66
PABPN1-208	ENST00000557702	ST20-AS1	Q8NBB2	130 aa		4.68	□□□□□ -1.66
PABPN1-208	ENST00000557702	PPDPFL	Q8WWR9	84 aa		4.68	□□□□□ -1.66
PABPN1-208	ENST00000557702		Q75L30	129 aa		4.67	□□□□□ -1.66
PABPN1-208	ENST00000557702	DEFB105A	Q8NG35	78 aa		4.67	□□□□□ -1.66
PABPN1-208	ENST00000557702	TEX49	A0A1B0GTD5	131 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	FAM236D	A0A1B0GTK5	79 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	FAM236C	P0DP71	79 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	ETDB	Q3ZM63	59 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	SMIM29	Q86T20	159 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	TEN1	Q86WV5	123 aa		4.66	□□□□□ -1.66
PABPN1-208	ENST00000557702	SPRR1B	P22528	89 aa		4.65	□□□□□ -1.67
PABPN1-208	ENST00000557702	LAMTOR3	Q9UHA4	124 aa		4.65	□□□□□ -1.67
PABPN1-208	ENST00000557702	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.64	□□□□□ -1.67
PABPN1-208	ENST00000557702	NDUFV3	P56181	108 aa	Known RBP	4.64	□□□□□ -1.67
PABPN1-208	ENST00000557702	OBSCN-AS1	Q96MR7	158 aa		4.63	□□□□□ -1.67
PABPN1-208	ENST00000557702	RBM3	P98179	157 aa	Known RBP	4.61	□□□□□ -1.67
PABPN1-208	ENST00000557702		A0A1B0GV72	72 aa		4.6	□□□□□ -1.67
PABPN1-208	ENST00000557702		F8WEM9	126 aa		4.6	□□□□□ -1.67
PABPN1-208	ENST00000557702	KRTAP5-9	P26371	169 aa		4.6	□□□□□ -1.67
PABPN1-208	ENST00000557702	C14orf132	Q9NPU4	83 aa		4.6	□□□□□ -1.67
PABPN1-208	ENST00000557702	TRBV7-4	A0A0J9YYF1	115 aa		4.59	□□□□□ -1.67
PABPN1-208	ENST00000557702	DSCR8	Q96T75	97 aa		4.59	□□□□□ -1.67
PABPN1-208	ENST00000557702	LOC110117498	A0A087WWA1	95 aa		4.58	□□□□□ -1.68
PABPN1-208	ENST00000557702	PDE6G	P18545	87 aa		4.58	□□□□□ -1.68
PABPN1-208	ENST00000557702		J3QR89	54 aa		4.57	□□□□□ -1.68
PABPN1-208	ENST00000557702	C21orf62-AS1	Q17RA5	79 aa		4.57	□□□□□ -1.68
PABPN1-208	ENST00000557702		Q6ZQT0	140 aa		4.57	□□□□□ -1.68
PABPN1-208	ENST00000557702	RBM12B-AS1	Q9P1G2	102 aa		4.57	□□□□□ -1.68
PABPN1-208	ENST00000557702		A0A0G2JQZ4	141 aa		4.56	□□□□□ -1.68
PABPN1-208	ENST00000557702	CCK	P06307	115 aa		4.56	□□□□□ -1.68
PABPN1-208	ENST00000557702		Q6JHZ5	121 aa		4.56	□□□□□ -1.68
PABPN1-208	ENST00000557702	IGFL1	Q6UW32	110 aa		4.56	□□□□□ -1.68
PABPN1-208	ENST00000557702		Q8N9P0	234 aa	Predicted RBP	4.56	□□□□□ -1.68
PABPN1-208	ENST00000557702		K7ERU9	68 aa		4.55	□□□□□ -1.68
PABPN1-208	ENST00000557702		Q96NJ1	140 aa		4.54	□□□□□ -1.68
PABPN1-208	ENST00000557702	VPS25	Q9BRG1	176 aa		4.54	□□□□□ -1.68
PABPN1-208	ENST00000557702	FAM240A	A0A1B0GVK7	77 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702		A0A1W2PNM2	257 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702		A6NN06	94 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702	KRTAP2-2	Q9BYT5	123 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702	KRTAP2-1	Q9BYU5	128 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702	GPR98	Q8WXG9	6306 aa		4.53	□□□□□ -1.68
PABPN1-208	ENST00000557702		A0A1B0GW54	56 aa		4.52	□□□□□ -1.69
PABPN1-208	ENST00000557702	ACYP1	P07311	99 aa		4.52	□□□□□ -1.69
PABPN1-208	ENST00000557702		A8MWP4	228 aa		4.51	□□□□□ -1.69
PABPN1-208	ENST00000557702	MPLKIP	Q8TAP9	179 aa		4.51	□□□□□ -1.69
PABPN1-208	ENST00000557702		A8MUU9	505 aa		4.49	□□□□□ -1.69
PABPN1-208	ENST00000557702	TRBV7-7	A0A0K0K1E9	115 aa		4.48	□□□□□ -1.69
PABPN1-208	ENST00000557702		A0A087WSZ3	146 aa		4.47	□□□□□ -1.69
PABPN1-208	ENST00000557702	HRES1	P13985	223 aa		4.47	□□□□□ -1.69
PABPN1-208	ENST00000557702	UBL5	Q9BZL1	73 aa		4.47	□□□□□ -1.69
PABPN1-208	ENST00000557702		Q6ZVQ6	151 aa		4.46	□□□□□ -1.7
PABPN1-208	ENST00000557702	NREP	Q16612	68 aa		4.45	□□□□□ -1.7
PABPN1-208	ENST00000557702	SS18L2	Q9UHA2	77 aa		4.45	□□□□□ -1.7
PABPN1-208	ENST00000557702	KRTAP16-1	A8MUX0	517 aa		4.43	□□□□□ -1.7
PABPN1-208	ENST00000557702	SPRR2E	P22531	72 aa		4.43	□□□□□ -1.7
PABPN1-208	ENST00000557702	SPRR2B	P35325	72 aa		4.43	□□□□□ -1.7
PABPN1-208	ENST00000557702	SPRR2A	P35326	72 aa		4.43	□□□□□ -1.7
PABPN1-208	ENST00000557702	LINC00643	Q86TS7	51 aa		4.43	□□□□□ -1.7
PABPN1-208	ENST00000557702	NOTCH2NL	Q7Z3S9	236 aa		4.42	□□□□□ -1.7
PABPN1-208	ENST00000557702	ATP5EP2	Q5VTU8	51 aa		4.41	□□□□□ -1.7
PABPN1-208	ENST00000557702	LINC00472	Q9H8W2	130 aa		4.41	□□□□□ -1.7
PABPN1-208	ENST00000557702	BPY2	O14599	106 aa		4.4	□□□□□ -1.71
PABPN1-208	ENST00000557702	IGKV3D-7	A0A0C4DH55	119 aa		4.39	□□□□□ -1.71
PABPN1-208	ENST00000557702	CXCL6	P80162	114 aa		4.39	□□□□□ -1.71
PABPN1-208	ENST00000557702	DEFB116	Q30KQ4	102 aa		4.39	□□□□□ -1.71
PABPN1-208	ENST00000557702	SIGMAR1	Q99720	223 aa		4.39	□□□□□ -1.71
PABPN1-208	ENST00000557702		J3KT08	172 aa		4.38	□□□□□ -1.71
PABPN1-208	ENST00000557702	MT-ATP8	P03928	68 aa		4.38	□□□□□ -1.71
PABPN1-208	ENST00000557702	IGKV4-1	P06312	121 aa		4.37	□□□□□ -1.71
PABPN1-208	ENST00000557702	DSCR10	P59022	87 aa		4.37	□□□□□ -1.71
PABPN1-208	ENST00000557702	KRTAP10-5	P60370	271 aa		4.35	□□□□□ -1.71
PABPN1-208	ENST00000557702	SPRR2F	Q96RM1	72 aa		4.35	□□□□□ -1.71
PABPN1-208	ENST00000557702	IMUP	Q9GZP8	106 aa		4.35	□□□□□ -1.71
PABPN1-208	ENST00000557702		K7EQZ3	153 aa		4.34	□□□□□ -1.71
PABPN1-208	ENST00000557702	NDUFB1	O75438	58 aa		4.34	□□□□□ -1.71
PABPN1-208	ENST00000557702	HIST1H4A	P62805	103 aa	Known RBP	4.34	□□□□□ -1.71
PABPN1-208	ENST00000557702		Q8N9L7	120 aa		4.34	□□□□□ -1.71
PABPN1-208	ENST00000557702	PRR15	Q8IV56	129 aa		4.33	□□□□□ -1.72
PABPN1-208	ENST00000557702		A0A087WVE0	104 aa		4.31	□□□□□ -1.72
PABPN1-208	ENST00000557702		A0A1B0GVX0	72 aa		4.31	□□□□□ -1.72
PABPN1-208	ENST00000557702	MT1B	P07438	61 aa		4.31	□□□□□ -1.72
PABPN1-208	ENST00000557702		Q5VV11	94 aa		4.31	□□□□□ -1.72
PABPN1-208	ENST00000557702	IGHV6-1	A0A0B4J1U7	121 aa		4.3	□□□□□ -1.72
PABPN1-208	ENST00000557702	MMP24-AS1	A0A0U1RRL7	71 aa		4.29	□□□□□ -1.72
PABPN1-208	ENST00000557702	C8orf87	E5RJ46	101 aa		4.29	□□□□□ -1.72
PABPN1-208	ENST00000557702	SPRR2D	P22532	72 aa		4.29	□□□□□ -1.72
PABPN1-208	ENST00000557702	C8orf17	Q9NRJ1	99 aa		4.29	□□□□□ -1.72
PABPN1-208	ENST00000557702	HCG22	E2RYF7	251 aa		4.28	□□□□□ -1.72
PABPN1-208	ENST00000557702	LINC00313	P59037	77 aa		4.28	□□□□□ -1.72
PABPN1-208	ENST00000557702	FAM236A	A0A1B0GUQ0	79 aa		4.27	□□□□□ -1.73
PABPN1-208	ENST00000557702	FAM236B	A0A1B0GV22	79 aa		4.27	□□□□□ -1.73
PABPN1-208	ENST00000557702	LCE1A	Q5T7P2	110 aa		4.27	□□□□□ -1.73
PABPN1-208	ENST00000557702	WFDC13	Q8IUB5	93 aa		4.27	□□□□□ -1.73
PABPN1-208	ENST00000557702	hDV103S1	A0JD37	113 aa		4.26	□□□□□ -1.73
PABPN1-208	ENST00000557702	CASC2	Q6XLA1	102 aa		4.26	□□□□□ -1.73

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