RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PANO1I0J062 215 aa3.04□□□□□ -1.92
ATXN3-247ENST00000557311 NCR3O14931 201 aa3.04□□□□□ -1.92
ATXN3-247ENST00000557311 TSHBP01222 138 aa3.04□□□□□ -1.92
ATXN3-247ENST00000557311 CRPP02741 224 aa3.04□□□□□ -1.92
ATXN3-247ENST00000557311 RNASE13Q5GAN3 156 aaKnown RBP3.04□□□□□ -1.92
ATXN3-247ENST00000557311 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
ATXN3-247ENST00000557311 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 TRBV10-1A0A0K0K1A3 114 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 PDE6GP18545 87 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 REG3GQ6UW15 175 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 MIR7-3HGQ8N6C7 128 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 LINC00308Q8TCZ7 52 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 C7orf33Q8WU49 177 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
ATXN3-247ENST00000557311 IGHV3-64A0A075B6Q5 118 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 TRBV6-5A0A0K0K1A5 114 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 LINC00242Q5T6M2 205 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 SPINK6Q6UWN8 80 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 ZNF625Q96I27 306 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-247ENST00000557311 FAM218AQ96MZ4 157 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 Q9BRP9 147 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 HIGD2AQ9BW72 106 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 PLAC8Q9NZF1 115 aa3.02□□□□□ -1.93
ATXN3-247ENST00000557311 H3BQ85 93 aa3.01□□□□□ -1.93
ATXN3-247ENST00000557311 NDUFA1O15239 70 aa3.01□□□□□ -1.93
ATXN3-247ENST00000557311 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
ATXN3-247ENST00000557311 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
ATXN3-247ENST00000557311 C20orf203Q8NBC4 194 aa3.01□□□□□ -1.93
ATXN3-247ENST00000557311 LOC110117498A0A087WWA1 95 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 MGPP08493 103 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 SPACA4Q8TDM5 124 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 LINC00208Q96KT6 92 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 OCR1Q9BZK8 76 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 LPAP08519 4548 aa3□□□□□ -1.93
ATXN3-247ENST00000557311 KRTAP16-1A8MUX0 517 aa2.99□□□□□ -1.93
ATXN3-247ENST00000557311 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
ATXN3-247ENST00000557311 CHTF8P0CG12 524 aa2.99□□□□□ -1.93
ATXN3-247ENST00000557311 RNASE3P12724 160 aaKnown RBP2.99□□□□□ -1.93
ATXN3-247ENST00000557311 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
ATXN3-247ENST00000557311 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
ATXN3-247ENST00000557311 C9orf129Q5T035 196 aaKnown RBP2.98□□□□□ -1.93
ATXN3-247ENST00000557311 RPL39LQ96EH5 51 aaKnown RBP2.98□□□□□ -1.93
ATXN3-247ENST00000557311 LINC00167Q96N53 147 aa2.98□□□□□ -1.93
ATXN3-247ENST00000557311 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
ATXN3-247ENST00000557311 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ATXN3-247ENST00000557311 MUC2Q02817 5179 aa2.98□□□□□ -1.93
ATXN3-247ENST00000557311 IGKV2-29A2NJV5 120 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-247ENST00000557311 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 RPL39P62891 51 aaKnown RBP2.97□□□□□ -1.93
ATXN3-247ENST00000557311 COX6A2Q02221 97 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 SPAG11BQ08648 103 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 SPAG11AQ6PDA7 123 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 Q6ZQT0 140 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 SPANXA2-OT1Q8N9U9 137 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 PSORS1C2Q9UIG4 136 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
ATXN3-247ENST00000557311 IGLV10-54A0A075B6I4 117 aa2.96□□□□□ -1.94
ATXN3-247ENST00000557311 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
ATXN3-247ENST00000557311 ROMO1P60602 79 aa2.96□□□□□ -1.94
ATXN3-247ENST00000557311 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
ATXN3-247ENST00000557311 IGLV7-46A0A075B6I9 117 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 POLR2KP53803 58 aaKnown RBP2.95□□□□□ -1.94
ATXN3-247ENST00000557311 CLPSL2Q6UWE3 100 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 KRTAP7-1Q8IUC3 87 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 SMIM11BQ8TCY0 68 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 COX7B2Q8TF08 81 aa2.95□□□□□ -1.94
ATXN3-247ENST00000557311 IGLV4-3A0A075B6K6 122 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 K7ERS5 55 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 PRR4Q16378 134 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 NTM-AS1Q6ZSK4 140 aa2.94□□□□□ -1.94
ATXN3-247ENST00000557311 ETDCA0A1B0GVM5 59 aa2.93□□□□□ -1.94
ATXN3-247ENST00000557311 H3BPC8 53 aa2.93□□□□□ -1.94
ATXN3-247ENST00000557311 IGKV4-1P06312 121 aa2.93□□□□□ -1.94
ATXN3-247ENST00000557311 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
ATXN3-247ENST00000557311 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
ATXN3-247ENST00000557311 A0A096LNI7 61 aa2.92□□□□□ -1.94
ATXN3-247ENST00000557311 H0Y9P7 68 aa2.92□□□□□ -1.94
ATXN3-247ENST00000557311 CRCT1Q9UGL9 99 aa2.92□□□□□ -1.94
ATXN3-247ENST00000557311 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
ATXN3-247ENST00000557311 IGLV1-50A0A075B6I6 118 aa2.91□□□□□ -1.94
ATXN3-247ENST00000557311 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-247ENST00000557311 A0A1W2PNM2 257 aa2.91□□□□□ -1.94
ATXN3-247ENST00000557311 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
ATXN3-247ENST00000557311 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-247ENST00000557311 SPINK7P58062 85 aa2.9□□□□□ -1.95
ATXN3-247ENST00000557311 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
ATXN3-247ENST00000557311 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-247ENST00000557311 COA5Q86WW8 74 aa2.9□□□□□ -1.95
ATXN3-247ENST00000557311 FAM104AQ969W3 186 aa2.9□□□□□ -1.95
ATXN3-247ENST00000557311 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
ATXN3-247ENST00000557311 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
ATXN3-247ENST00000557311 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms