RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LY6G6CO95867 125 aa3.07□□□□□ -1.92
SRP54-211ENST00000556445 IGLV7-43P04211 117 aa3.07□□□□□ -1.92
SRP54-211ENST00000556445 FUSP35637 526 aaKnown RBP eCLIP3.07□□□□□ -1.92
SRP54-211ENST00000556445 Q6JHZ5 121 aa3.07□□□□□ -1.92
SRP54-211ENST00000556445 IGLV5-48A0A075B6I7 105 aa3.06□□□□□ -1.92
SRP54-211ENST00000556445 A0A1W2PNN7 141 aa3.06□□□□□ -1.92
SRP54-211ENST00000556445 LINC00846Q9NV44 126 aa3.06□□□□□ -1.92
SRP54-211ENST00000556445 H3BPC8 53 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 RTL8CO15255 209 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 ST20-AS1Q8NBB2 130 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 DEFB105AQ8NG35 78 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 SPACA4Q8TDM5 124 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 Q9BRP9 147 aa3.05□□□□□ -1.92
SRP54-211ENST00000556445 TRAV7A0A075B6U4 112 aa3.04□□□□□ -1.92
SRP54-211ENST00000556445 BCE1O60756 84 aa3.04□□□□□ -1.92
SRP54-211ENST00000556445 ANK2Q01484 3957 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 CRYGAP11844 174 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 SPRR1BP22528 89 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 NREPQ16612 68 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 HIGD2AQ9BW72 106 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
SRP54-211ENST00000556445 CMYA5Q8N3K9 4069 aa3.03□□□□□ -1.93
SRP54-211ENST00000556445 ATOX1O00244 68 aa3.02□□□□□ -1.93
SRP54-211ENST00000556445 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
SRP54-211ENST00000556445 PRLHP81277 87 aa3.02□□□□□ -1.93
SRP54-211ENST00000556445 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
SRP54-211ENST00000556445 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
SRP54-211ENST00000556445 IGKV3D-7A0A0C4DH55 119 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 A0A1B0GU33 70 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 A6NN06 94 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 HAMPP81172 84 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 SPRR4Q96PI1 79 aa3.01□□□□□ -1.93
SRP54-211ENST00000556445 ASB16-AS1Q495Z4 193 aa3□□□□□ -1.93
SRP54-211ENST00000556445 C9orf153Q5TBE3 101 aa3□□□□□ -1.93
SRP54-211ENST00000556445 HUWE1Q7Z6Z7 4374 aaKnown RBP2.99□□□□□ -1.93
SRP54-211ENST00000556445 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
SRP54-211ENST00000556445 A0A1W2PNM2 257 aa2.98□□□□□ -1.93
SRP54-211ENST00000556445 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
SRP54-211ENST00000556445 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
SRP54-211ENST00000556445 IGFL1Q6UW32 110 aa2.98□□□□□ -1.93
SRP54-211ENST00000556445 PSORS1C2Q9UIG4 136 aa2.98□□□□□ -1.93
SRP54-211ENST00000556445 COL7A1Q02388 2944 aa2.97□□□□□ -1.93
SRP54-211ENST00000556445 ROMO1P60602 79 aa2.97□□□□□ -1.93
SRP54-211ENST00000556445 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
SRP54-211ENST00000556445 ATP11AUNQ6ZP68 121 aa2.97□□□□□ -1.93
SRP54-211ENST00000556445 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
SRP54-211ENST00000556445 KRTAP11-1Q8IUC1 163 aa2.97□□□□□ -1.93
SRP54-211ENST00000556445 LCE6AA0A183 80 aa2.96□□□□□ -1.94
SRP54-211ENST00000556445 COX7CP15954 63 aa2.96□□□□□ -1.94
SRP54-211ENST00000556445 Q6ZSA8 131 aa2.96□□□□□ -1.94
SRP54-211ENST00000556445 SERP2Q8N6R1 65 aa2.96□□□□□ -1.94
SRP54-211ENST00000556445 A0A087WVE0 104 aa2.95□□□□□ -1.94
SRP54-211ENST00000556445 hDV103S1A0JD37 113 aa2.95□□□□□ -1.94
SRP54-211ENST00000556445 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
SRP54-211ENST00000556445 A0A087WSZ3 146 aa2.94□□□□□ -1.94
SRP54-211ENST00000556445 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
SRP54-211ENST00000556445 DNAH9Q9NYC9 4486 aa2.94□□□□□ -1.94
SRP54-211ENST00000556445 NDUFB1O75438 58 aa2.93□□□□□ -1.94
SRP54-211ENST00000556445 IGKV4-1P06312 121 aa2.93□□□□□ -1.94
SRP54-211ENST00000556445 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
SRP54-211ENST00000556445 TENM2Q9NT68 2774 aa2.93□□□□□ -1.94
SRP54-211ENST00000556445 MEGF8Q7Z7M0 2845 aa2.92□□□□□ -1.94
SRP54-211ENST00000556445 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
SRP54-211ENST00000556445 FBN3Q75N90 2809 aa2.91□□□□□ -1.94
SRP54-211ENST00000556445 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
SRP54-211ENST00000556445 MOBPQ13875 183 aa2.91□□□□□ -1.94
SRP54-211ENST00000556445 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
SRP54-211ENST00000556445 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
SRP54-211ENST00000556445 HCG22E2RYF7 251 aa2.9□□□□□ -1.95
SRP54-211ENST00000556445 NDUFC1O43677 76 aa2.9□□□□□ -1.95
SRP54-211ENST00000556445 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
SRP54-211ENST00000556445 LINC00472Q9H8W2 130 aa2.9□□□□□ -1.95
SRP54-211ENST00000556445 K7EQZ3 153 aa2.89□□□□□ -1.95
SRP54-211ENST00000556445 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
SRP54-211ENST00000556445 Q8N9L7 120 aa2.89□□□□□ -1.95
SRP54-211ENST00000556445 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
SRP54-211ENST00000556445 KLKP1Q107X0 134 aa2.88□□□□□ -1.95
SRP54-211ENST00000556445 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
SRP54-211ENST00000556445 LIMD2Q9BT23 127 aa2.88□□□□□ -1.95
SRP54-211ENST00000556445 CSMD3Q7Z407 3707 aa2.87□□□□□ -1.95
SRP54-211ENST00000556445 CASC2Q6XLA1 102 aa2.87□□□□□ -1.95
SRP54-211ENST00000556445 C20orf197Q8N268 126 aa2.87□□□□□ -1.95
SRP54-211ENST00000556445 R4GN34 69 aa2.87□□□□□ -1.95
SRP54-211ENST00000556445 TGP01266 2768 aa2.86□□□□□ -1.95
SRP54-211ENST00000556445 DNAH7Q8WXX0 4024 aa2.86□□□□□ -1.95
SRP54-211ENST00000556445 ATP5EP56381 51 aaPredicted RBP2.86□□□□□ -1.95
SRP54-211ENST00000556445 TMEM254Q8TBM7 123 aa2.86□□□□□ -1.95
SRP54-211ENST00000556445 TP53AIP1Q9HCN2 124 aa2.86□□□□□ -1.95
SRP54-211ENST00000556445 ANAPC11Q9NYG5 84 aa2.86□□□□□ -1.95
SRP54-211ENST00000556445 PRKDCP78527 4128 aaKnown RBP2.86□□□□□ -1.95
SRP54-211ENST00000556445 DNAH1Q9P2D7 4330 aa2.85□□□□□ -1.95
SRP54-211ENST00000556445 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
SRP54-211ENST00000556445 SPAG11AQ6PDA7 123 aa2.85□□□□□ -1.95
SRP54-211ENST00000556445 Q96NJ1 140 aa2.85□□□□□ -1.95
SRP54-211ENST00000556445 VPS13DQ5THJ4 4388 aa2.84□□□□□ -1.95
SRP54-211ENST00000556445 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.95
SRP54-211ENST00000556445 SPINK1P00995 79 aa2.84□□□□□ -1.95
SRP54-211ENST00000556445 P0C880 135 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms