RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
PRKCH-218ENST00000555628 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
PRKCH-218ENST00000555628 COPS9Q8WXC6 57 aa4.16□□□□□ -1.74
PRKCH-218ENST00000555628 SIGMAR1Q99720 223 aa4.16□□□□□ -1.74
PRKCH-218ENST00000555628 SPINK7P58062 85 aa4.15□□□□□ -1.75
PRKCH-218ENST00000555628 VAMP3Q15836 100 aa4.15□□□□□ -1.75
PRKCH-218ENST00000555628 SCGB1D4Q6XE38 83 aa4.14□□□□□ -1.75
PRKCH-218ENST00000555628 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
PRKCH-218ENST00000555628 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
PRKCH-218ENST00000555628 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
PRKCH-218ENST00000555628 ZCCHC13Q8WW36 166 aaKnown RBP4.12□□□□□ -1.75
PRKCH-218ENST00000555628 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
PRKCH-218ENST00000555628 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
PRKCH-218ENST00000555628 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
PRKCH-218ENST00000555628 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
PRKCH-218ENST00000555628 LINC00472Q9H8W2 130 aa4.11□□□□□ -1.75
PRKCH-218ENST00000555628 NDUFV3P56181 108 aaKnown RBP4.1□□□□□ -1.75
PRKCH-218ENST00000555628 NDUFA5Q16718 116 aa4.1□□□□□ -1.75
PRKCH-218ENST00000555628 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
PRKCH-218ENST00000555628 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
PRKCH-218ENST00000555628 S100A6P06703 90 aa4.08□□□□□ -1.76
PRKCH-218ENST00000555628 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
PRKCH-218ENST00000555628 IGHV6-1A0A0B4J1U7 121 aa4.07□□□□□ -1.76
PRKCH-218ENST00000555628 Q5VV11 94 aa4.07□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BKO60814 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BJP06899 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BOP23527 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BBP33778 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BDP58876 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BCP62807 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST2H2BEQ16778 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 DEFB116Q30KQ4 102 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.06□□□□□ -1.76
PRKCH-218ENST00000555628 BVES-AS1Q5T3Y7 98 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BHQ93079 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BNQ99877 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 HIST1H2BMQ99879 126 aa4.06□□□□□ -1.76
PRKCH-218ENST00000555628 TRBV7-4A0A0J9YYF1 115 aa4.05□□□□□ -1.76
PRKCH-218ENST00000555628 SPRR2EP22531 72 aa4.05□□□□□ -1.76
PRKCH-218ENST00000555628 SPRR2BP35325 72 aa4.05□□□□□ -1.76
PRKCH-218ENST00000555628 SPRR2AP35326 72 aa4.05□□□□□ -1.76
PRKCH-218ENST00000555628 RAB37Q96AX2 223 aa4.05□□□□□ -1.76
PRKCH-218ENST00000555628 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
PRKCH-218ENST00000555628 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
PRKCH-218ENST00000555628 H3BMG7 143 aa4.04□□□□□ -1.76
PRKCH-218ENST00000555628 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
PRKCH-218ENST00000555628 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
PRKCH-218ENST00000555628 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
PRKCH-218ENST00000555628 C12orf57Q99622 126 aa4.02□□□□□ -1.77
PRKCH-218ENST00000555628 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
PRKCH-218ENST00000555628 COA6Q5JTJ3 125 aaKnown RBP4.01□□□□□ -1.77
PRKCH-218ENST00000555628 KRTDAPP60985 99 aa4□□□□□ -1.77
PRKCH-218ENST00000555628 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
PRKCH-218ENST00000555628 HIST1H4GQ99525 98 aa3.98□□□□□ -1.77
PRKCH-218ENST00000555628 V9GYY9 64 aa3.98□□□□□ -1.77
PRKCH-218ENST00000555628 A0A1B0GX51 115 aa3.95□□□□□ -1.78
PRKCH-218ENST00000555628 H0YGX0 51 aa3.95□□□□□ -1.78
PRKCH-218ENST00000555628 FABP2P12104 132 aa3.95□□□□□ -1.78
PRKCH-218ENST00000555628 ANKRD29Q8N6D5 301 aa3.95□□□□□ -1.78
PRKCH-218ENST00000555628 C5orf47Q569G3 176 aa3.94□□□□□ -1.78
PRKCH-218ENST00000555628 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
PRKCH-218ENST00000555628 CCKP06307 115 aa3.93□□□□□ -1.78
PRKCH-218ENST00000555628 TRACP01848 142 aa3.92□□□□□ -1.78
PRKCH-218ENST00000555628 SPRR2DP22532 72 aa3.92□□□□□ -1.78
PRKCH-218ENST00000555628 A0A1B0GV72 72 aa3.91□□□□□ -1.78
PRKCH-218ENST00000555628 A0A0B4J2C4 111 aa3.9□□□□□ -1.79
PRKCH-218ENST00000555628 FAM236AA0A1B0GUQ0 79 aa3.9□□□□□ -1.79
PRKCH-218ENST00000555628 FAM236BA0A1B0GV22 79 aa3.9□□□□□ -1.79
PRKCH-218ENST00000555628 SNCGO76070 127 aa3.9□□□□□ -1.79
PRKCH-218ENST00000555628 C8orf17Q9NRJ1 99 aa3.9□□□□□ -1.79
PRKCH-218ENST00000555628 J3KT08 172 aa3.89□□□□□ -1.79
PRKCH-218ENST00000555628 DSCR8Q96T75 97 aa3.88□□□□□ -1.79
PRKCH-218ENST00000555628 CXCL6P80162 114 aa3.87□□□□□ -1.79
PRKCH-218ENST00000555628 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
PRKCH-218ENST00000555628 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
PRKCH-218ENST00000555628 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
PRKCH-218ENST00000555628 MT1XP80297 61 aa3.85□□□□□ -1.79
PRKCH-218ENST00000555628 LYRM7Q5U5X0 104 aa3.85□□□□□ -1.79
PRKCH-218ENST00000555628 Q6ZQT0 140 aa3.85□□□□□ -1.79
PRKCH-218ENST00000555628 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
PRKCH-218ENST00000555628 DLEU1O43261 78 aa3.84□□□□□ -1.79
PRKCH-218ENST00000555628 COX8AP10176 69 aa3.84□□□□□ -1.79
PRKCH-218ENST00000555628 HIST1H2BLQ99880 126 aa3.84□□□□□ -1.79
PRKCH-218ENST00000555628 H3BQ85 93 aa3.83□□□□□ -1.8
PRKCH-218ENST00000555628 TMEM256-PLSCR3K7ERE1 68 aa3.83□□□□□ -1.8
PRKCH-218ENST00000555628 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
PRKCH-218ENST00000555628 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
PRKCH-218ENST00000555628 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
PRKCH-218ENST00000555628 MMP24-AS1A0A0U1RRL7 71 aa3.82□□□□□ -1.8
PRKCH-218ENST00000555628 NDUFB1O75438 58 aa3.82□□□□□ -1.8
PRKCH-218ENST00000555628 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
PRKCH-218ENST00000555628 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
PRKCH-218ENST00000555628 Q5W150 140 aa3.82□□□□□ -1.8
PRKCH-218ENST00000555628 C7orf65Q6ZTY9 151 aa3.81□□□□□ -1.8
PRKCH-218ENST00000555628 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
PRKCH-218ENST00000555628 IMUPQ9GZP8 106 aa3.81□□□□□ -1.8
PRKCH-218ENST00000555628 HIGD1BQ9P298 99 aa3.81□□□□□ -1.8
PRKCH-218ENST00000555628 PRO1854Q9UHT4 67 aa3.81□□□□□ -1.8
PRKCH-218ENST00000555628 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
PRKCH-218ENST00000555628 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms