RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 K7EP13 123 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 IFNGP01579 166 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 WFDC13Q8IUB5 93 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 LEAP2Q969E1 77 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 FAM167A-AS1Q96KT0 104 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
SCFD1-214ENST00000554819 IQGAP2Q13576 1575 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 H0YGG7 62 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 MT-ATP8P03928 68 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 HTN1P15515 57 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 HMGA1P17096 107 aaKnown RBP-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 DEFB133Q30KQ1 61 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 FAM223AQ8IWN6 122 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 C1orf54Q8WWF1 131 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 UQCR10Q9UDW1 63 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 PPLO60437 1756 aa-0.61□□□□□ -2.51
SCFD1-214ENST00000554819 UACAQ9BZF9 1416 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 TOP2AP11388 1531 aaKnown RBP-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 UBE2L5PA0A1B0GUS4 154 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 OOSP1A8MZH6 123 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 UBE2L3P68036 154 aaKnown RBP-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 S100A12P80511 92 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 H1FX-AS1Q4G0G2 97 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 PP6455Q8WZ26 134 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 USMG5Q96IX5 58 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 ARL2-SNX15V9GYD0 113 aa-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 KTN1Q86UP2 1357 aaKnown RBP-0.62□□□□□ -2.51
SCFD1-214ENST00000554819 ATP7AQ04656 1500 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 MYH4Q9Y623 1939 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 DEFB108AA8MXU0 73 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 SYS1-DBNDD2H3BUS1 97 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 APELAP0DMC3 54 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 COX8AP10176 69 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 ATP5EP56381 51 aaPredicted RBP-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 PRXQ9BXM0 1461 aa-0.63□□□□□ -2.51
SCFD1-214ENST00000554819 ARFGEF2Q9Y6D5 1785 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 FANCD2Q9BXW9 1451 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 CCNB3Q8WWL7 1395 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 SPART-AS1P0CW21 52 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 AKAIN1P0CW23 69 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 C9orf153Q5TBE3 101 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 C6orf201Q7Z4U5 140 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 LCN9Q8WX39 176 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 TSC22D3Q99576 134 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 PRO1933Q9H354 126 aa-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 EDC4Q6P2E9 1401 aaKnown RBP-0.64□□□□□ -2.51
SCFD1-214ENST00000554819 F6UZH7 168 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 HMGN1P05114 100 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 TNP1P09430 55 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 Q0VG73 95 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 TDRG1Q3Y452 100 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 WFDC10BQ8IUB3 73 aa-0.65□□□□□ -2.51
SCFD1-214ENST00000554819 IQGAP3Q86VI3 1631 aa-0.66□□□□□ -2.51
SCFD1-214ENST00000554819 A0A096LNI7 61 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 A0A096LPF7 62 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 FAM223BA6NKX1 122 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 H3BUX3 64 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 UQCRHP07919 91 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 COX6CP09669 75 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 GNG11P61952 73 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 DEFB108BQ8NET1 73 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 FAM107BQ9H098 131 aa-0.66□□□□□ -2.52
SCFD1-214ENST00000554819 ANKRD36A6QL64 1941 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 IGLV5-48A0A075B6I7 105 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 A0A1B0GWA3 101 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 FAM24AA6NFZ4 105 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 CPSF4LA6NMK7 179 aaKnown RBP-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 MANBALQ9NQG1 85 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 PRO1854Q9UHT4 67 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 IER3IP1Q9Y5U9 82 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 CEP162Q5TB80 1403 aa-0.67□□□□□ -2.52
SCFD1-214ENST00000554819 NAP1L6A6NFF2 107 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 TRAPPC2P0DI81 140 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 TRAPPC2BP0DI82 140 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 SAA2P0DJI9 122 aaPredicted RBP-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 DEFB130BP0DP73 79 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 DEFB130AP0DP74 79 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 SEC11AP67812 179 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 CCDC141Q6ZP82 1450 aa-0.68□□□□□ -2.52
SCFD1-214ENST00000554819 CNTLNQ9NXG0 1405 aa-0.69□□□□□ -2.52
SCFD1-214ENST00000554819 ANKRD36BQ8N2N9 1353 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 TCHHQ07283 1943 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 MMP24-AS1A0A0U1RRL7 71 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 SNAPC5O75971 98 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 SFTA3P0C7M3 94 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 RPL13AP3Q6NVV1 102 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 SFTA2Q6UW10 78 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 C12orf57Q99622 126 aa-0.7□□□□□ -2.52
SCFD1-214ENST00000554819 ANKARQ7Z5J8 1434 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 UQCRHLA0A096LP55 91 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 A0A1B0GU69 56 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 H3BQ15 152 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 GNG4P50150 75 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 NCMAPQ5T1S8 102 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 C9orf62Q8N4C0 152 aa-0.71□□□□□ -2.52
SCFD1-214ENST00000554819 NDUFA4O00483 81 aa-0.72□□□□□ -2.52
SCFD1-214ENST00000554819 DLEU1O43261 78 aa-0.72□□□□□ -2.52
SCFD1-214ENST00000554819 SVBPQ8N300 66 aa-0.72□□□□□ -2.52
SCFD1-214ENST00000554819 RHPN1-AS1Q9BWJ2 59 aa-0.72□□□□□ -2.52
SCFD1-214ENST00000554819 EFCAB10A6NFE3 127 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms