RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 NREPQ16612 68 aa2.68□□□□□ -1.98
FOXN3-206ENST00000554005 ENHOQ6UWT2 76 aa2.68□□□□□ -1.98
FOXN3-206ENST00000554005 CASC2Q6XLA1 102 aa2.68□□□□□ -1.98
FOXN3-206ENST00000554005 ADM2Q7Z4H4 148 aa2.68□□□□□ -1.98
FOXN3-206ENST00000554005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.67□□□□□ -1.98
FOXN3-206ENST00000554005 LCE6AA0A183 80 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 IGKV2-29A2NJV5 120 aaPredicted RBP2.67□□□□□ -1.98
FOXN3-206ENST00000554005 IGHV3-30-3P0DP02 117 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
FOXN3-206ENST00000554005 LINC01556Q5JQF7 62 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 WFDC10BQ8IUB3 73 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 Q8NDZ9 215 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 DEFB104AQ8WTQ1 72 aa2.67□□□□□ -1.98
FOXN3-206ENST00000554005 DNAH9Q9NYC9 4486 aa2.66□□□□□ -1.98
FOXN3-206ENST00000554005 LYSTQ99698 3801 aa2.66□□□□□ -1.98
FOXN3-206ENST00000554005 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
FOXN3-206ENST00000554005 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
FOXN3-206ENST00000554005 ANGP03950 147 aaKnown RBP2.65□□□□□ -1.99
FOXN3-206ENST00000554005 ELOF1P60002 83 aaKnown RBP2.65□□□□□ -1.99
FOXN3-206ENST00000554005 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
FOXN3-206ENST00000554005 UBE2DNLQ8IWF7 75 aa2.65□□□□□ -1.99
FOXN3-206ENST00000554005 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
FOXN3-206ENST00000554005 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
FOXN3-206ENST00000554005 C14orf132Q9NPU4 83 aa2.65□□□□□ -1.99
FOXN3-206ENST00000554005 HUWE1Q7Z6Z7 4374 aaKnown RBP2.65□□□□□ -1.99
FOXN3-206ENST00000554005 LINC00959A0A1B0GUT2 108 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 CRPP02741 224 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 MIAQ16674 131 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 Q9BRP9 147 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 UBL5Q9BZL1 73 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 PLAC8Q9NZF1 115 aa2.64□□□□□ -1.99
FOXN3-206ENST00000554005 KMT2CQ8NEZ4 4911 aaKnown RBP2.64□□□□□ -1.99
FOXN3-206ENST00000554005 STARD9Q9P2P6 4700 aa2.63□□□□□ -1.99
FOXN3-206ENST00000554005 NBDYA0A0U1RRE5 68 aa2.63□□□□□ -1.99
FOXN3-206ENST00000554005 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
FOXN3-206ENST00000554005 ZNF625Q96I27 306 aaPredicted RBP2.63□□□□□ -1.99
FOXN3-206ENST00000554005 K7ERS5 55 aa2.62□□□□□ -1.99
FOXN3-206ENST00000554005 P0C880 135 aa2.62□□□□□ -1.99
FOXN3-206ENST00000554005 KRTAP26-1Q6PEX3 210 aa2.62□□□□□ -1.99
FOXN3-206ENST00000554005 CLPSL2Q6UWE3 100 aa2.62□□□□□ -1.99
FOXN3-206ENST00000554005 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 IGLV10-54A0A075B6I4 117 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 IGKV3OR2-268A0A0C4DH90 116 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 JMJD7-PLA2G4BH0Y9G9 81 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 LY6G6CO95867 125 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 CNBPP62633 177 aaKnown RBP2.61□□□□□ -1.99
FOXN3-206ENST00000554005 COX6A2Q02221 97 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 Q6ZQT0 140 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 LINC00304Q8N9R0 145 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 CDKN2A-AS1Q9UH64 79 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 LINC01558Q9Y6Z2 57 aa2.61□□□□□ -1.99
FOXN3-206ENST00000554005 ALMS1Q8TCU4 4167 aa2.6□□□□□ -1.99
FOXN3-206ENST00000554005 A8MWP4 228 aa2.6□□□□□ -1.99
FOXN3-206ENST00000554005 LECT2O14960 151 aa2.6□□□□□ -1.99
FOXN3-206ENST00000554005 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
FOXN3-206ENST00000554005 Q6ZRN7 208 aaPredicted RBP2.6□□□□□ -1.99
FOXN3-206ENST00000554005 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
FOXN3-206ENST00000554005 DYNC2H1Q8NCM8 4307 aaKnown RBP2.6□□□□□ -1.99
FOXN3-206ENST00000554005 IGHV3-64A0A075B6Q5 118 aa2.59□□□□□ -1.99
FOXN3-206ENST00000554005 A0A087WSZ3 146 aa2.59□□□□□ -1.99
FOXN3-206ENST00000554005 Q8IZM0 81 aa2.59□□□□□ -1.99
FOXN3-206ENST00000554005 ORMDL1Q9P0S3 153 aa2.59□□□□□ -1.99
FOXN3-206ENST00000554005 RYR3Q15413 4870 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 GVQW2A0A096LPI5 108 aaPredicted RBP2.58□□□□□ -2
FOXN3-206ENST00000554005 H0YGX0 51 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 M0R2N4 97 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 NCR3O14931 201 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 NDUFB1O75438 58 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 SPAG11BQ08648 103 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 LCE1CQ5T751 118 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 COX7B2Q8TF08 81 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 LINC00208Q96KT6 92 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 RYR2Q92736 4967 aa2.58□□□□□ -2
FOXN3-206ENST00000554005 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
FOXN3-206ENST00000554005 NDUFA1O15239 70 aa2.57□□□□□ -2
FOXN3-206ENST00000554005 PDE6GP18545 87 aa2.57□□□□□ -2
FOXN3-206ENST00000554005 TOMM7Q9P0U1 55 aa2.57□□□□□ -2
FOXN3-206ENST00000554005 DNAH1Q9P2D7 4330 aa2.56□□□□□ -2
FOXN3-206ENST00000554005 A0A087WTM6 91 aa2.56□□□□□ -2
FOXN3-206ENST00000554005 SPINK7P58062 85 aa2.56□□□□□ -2
FOXN3-206ENST00000554005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.56□□□□□ -2
FOXN3-206ENST00000554005 C20orf166-AS1Q96NR2 134 aa2.56□□□□□ -2
FOXN3-206ENST00000554005 HECTD4Q9Y4D8 3996 aa2.56□□□□□ -2
FOXN3-206ENST00000554005 IGLV7-43P04211 117 aa2.55□□□□□ -2
FOXN3-206ENST00000554005 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
FOXN3-206ENST00000554005 LINC00308Q8TCZ7 52 aa2.55□□□□□ -2
FOXN3-206ENST00000554005 KMT2AQ03164 3969 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 HAMPP81172 84 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 COX17Q14061 63 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 C9orf163Q8N9P6 203 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 C6orf48Q9UBA6 75 aa2.54□□□□□ -2
FOXN3-206ENST00000554005 HYDINQ4G0P3 5121 aa2.53□□□□□ -2
FOXN3-206ENST00000554005 IGKV4-1P06312 121 aa2.53□□□□□ -2
FOXN3-206ENST00000554005 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
FOXN3-206ENST00000554005 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms