RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PRLHP81277 87 aa4.79□□□□□ -1.64
UBR1-202ENST00000546274 LCE2BO14633 110 aa4.79□□□□□ -1.64
UBR1-202ENST00000546274 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
UBR1-202ENST00000546274 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
UBR1-202ENST00000546274 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
UBR1-202ENST00000546274 IGLV8-61A0A075B6I0 122 aa4.78□□□□□ -1.64
UBR1-202ENST00000546274 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
UBR1-202ENST00000546274 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
UBR1-202ENST00000546274 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
UBR1-202ENST00000546274 UQCR11O14957 56 aa4.76□□□□□ -1.65
UBR1-202ENST00000546274 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
UBR1-202ENST00000546274 TP53AIP1Q9HCN2 124 aa4.75□□□□□ -1.65
UBR1-202ENST00000546274 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
UBR1-202ENST00000546274 ACYP2P14621 99 aa4.73□□□□□ -1.65
UBR1-202ENST00000546274 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
UBR1-202ENST00000546274 PLECQ15149 4684 aaKnown RBP4.73□□□□□ -1.65
UBR1-202ENST00000546274 ZNF861PO60384 105 aa4.73□□□□□ -1.65
UBR1-202ENST00000546274 STAB2Q8WWQ8 2551 aa4.73□□□□□ -1.65
UBR1-202ENST00000546274 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
UBR1-202ENST00000546274 SPRR1BP22528 89 aa4.72□□□□□ -1.65
UBR1-202ENST00000546274 A0A087X002 238 aa4.71□□□□□ -1.66
UBR1-202ENST00000546274 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
UBR1-202ENST00000546274 APLNQ9ULZ1 77 aa4.71□□□□□ -1.66
UBR1-202ENST00000546274 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
UBR1-202ENST00000546274 PANO1I0J062 215 aa4.69□□□□□ -1.66
UBR1-202ENST00000546274 P0C880 135 aa4.69□□□□□ -1.66
UBR1-202ENST00000546274 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
UBR1-202ENST00000546274 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
UBR1-202ENST00000546274 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
UBR1-202ENST00000546274 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
UBR1-202ENST00000546274 PRKDCP78527 4128 aaKnown RBP4.68□□□□□ -1.66
UBR1-202ENST00000546274 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
UBR1-202ENST00000546274 FRAS1Q86XX4 4008 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 Q5W150 140 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 Q6ZRN7 208 aaPredicted RBP4.66□□□□□ -1.66
UBR1-202ENST00000546274 UBE2DNLQ8IWF7 75 aa4.66□□□□□ -1.66
UBR1-202ENST00000546274 MRPL34Q9BQ48 92 aaKnown RBP4.66□□□□□ -1.66
UBR1-202ENST00000546274 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
UBR1-202ENST00000546274 Q96NJ1 140 aa4.65□□□□□ -1.67
UBR1-202ENST00000546274 A8MUU9 505 aa4.64□□□□□ -1.67
UBR1-202ENST00000546274 IGLV9-49A0A0B4J1Y8 123 aa4.64□□□□□ -1.67
UBR1-202ENST00000546274 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
UBR1-202ENST00000546274 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
UBR1-202ENST00000546274 VPS13DQ5THJ4 4388 aa4.63□□□□□ -1.67
UBR1-202ENST00000546274 NBDYA0A0U1RRE5 68 aa4.63□□□□□ -1.67
UBR1-202ENST00000546274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
UBR1-202ENST00000546274 IGLV5-52A0A0A0MRZ9 124 aa4.62□□□□□ -1.67
UBR1-202ENST00000546274 TGP01266 2768 aa4.62□□□□□ -1.67
UBR1-202ENST00000546274 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
UBR1-202ENST00000546274 A0A1B0GVX0 72 aa4.62□□□□□ -1.67
UBR1-202ENST00000546274 SPACA4Q8TDM5 124 aa4.62□□□□□ -1.67
UBR1-202ENST00000546274 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
UBR1-202ENST00000546274 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
UBR1-202ENST00000546274 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
UBR1-202ENST00000546274 SPINK1P00995 79 aa4.59□□□□□ -1.67
UBR1-202ENST00000546274 SSBP3-AS1Q7Z2R9 100 aa4.59□□□□□ -1.68
UBR1-202ENST00000546274 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
UBR1-202ENST00000546274 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
UBR1-202ENST00000546274 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
UBR1-202ENST00000546274 IGLV7-43P04211 117 aa4.58□□□□□ -1.68
UBR1-202ENST00000546274 ALMS1Q8TCU4 4167 aa4.57□□□□□ -1.68
UBR1-202ENST00000546274 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
UBR1-202ENST00000546274 A0A087WTM6 91 aa4.55□□□□□ -1.68
UBR1-202ENST00000546274 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
UBR1-202ENST00000546274 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
UBR1-202ENST00000546274 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
UBR1-202ENST00000546274 DNAH6Q9C0G6 4158 aa4.53□□□□□ -1.68
UBR1-202ENST00000546274 KRTAP16-1A8MUX0 517 aa4.53□□□□□ -1.68
UBR1-202ENST00000546274 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
UBR1-202ENST00000546274 H0YAA0 97 aa4.5□□□□□ -1.69
UBR1-202ENST00000546274 LY6G6CO95867 125 aa4.5□□□□□ -1.69
UBR1-202ENST00000546274 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
UBR1-202ENST00000546274 DNAH5Q8TE73 4624 aa4.5□□□□□ -1.69
UBR1-202ENST00000546274 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
UBR1-202ENST00000546274 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
UBR1-202ENST00000546274 DNAH11Q96DT5 4516 aa4.49□□□□□ -1.69
UBR1-202ENST00000546274 Q6ZSA8 131 aa4.48□□□□□ -1.69
UBR1-202ENST00000546274 DMBT1Q9UGM3 2413 aaPredicted RBP4.47□□□□□ -1.69
UBR1-202ENST00000546274 PKD1P98161 4303 aa4.46□□□□□ -1.7
UBR1-202ENST00000546274 Q8N1X5 172 aa4.43□□□□□ -1.7
UBR1-202ENST00000546274 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
UBR1-202ENST00000546274 HYDINQ4G0P3 5121 aa4.42□□□□□ -1.7
UBR1-202ENST00000546274 A0A1B0GU33 70 aa4.42□□□□□ -1.7
UBR1-202ENST00000546274 K7ERS5 55 aa4.41□□□□□ -1.7
UBR1-202ENST00000546274 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
UBR1-202ENST00000546274 TYMSOSQ8TAI1 123 aa4.41□□□□□ -1.7
UBR1-202ENST00000546274 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
UBR1-202ENST00000546274 KRTAP10-2P60368 255 aa4.39□□□□□ -1.71
UBR1-202ENST00000546274 KRTAP13-2Q52LG2 175 aa4.39□□□□□ -1.71
UBR1-202ENST00000546274 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
UBR1-202ENST00000546274 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
UBR1-202ENST00000546274 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
UBR1-202ENST00000546274 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
UBR1-202ENST00000546274 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
UBR1-202ENST00000546274 RYR2Q92736 4967 aa4.35□□□□□ -1.71
UBR1-202ENST00000546274 KMT2CQ8NEZ4 4911 aaKnown RBP4.35□□□□□ -1.71
UBR1-202ENST00000546274 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms