RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.31
CDH4-201ENST00000543233 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.31
CDH4-201ENST00000543233 UQCR11O14957 56 aa6.9□□□□□ -1.31
CDH4-201ENST00000543233 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
CDH4-201ENST00000543233 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
CDH4-201ENST00000543233 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
CDH4-201ENST00000543233 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
CDH4-201ENST00000543233 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
CDH4-201ENST00000543233 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
CDH4-201ENST00000543233 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
CDH4-201ENST00000543233 ACYP2P14621 99 aa6.84□□□□□ -1.31
CDH4-201ENST00000543233 SPRR1AP35321 89 aa6.84□□□□□ -1.31
CDH4-201ENST00000543233 PANO1I0J062 215 aa6.82□□□□□ -1.32
CDH4-201ENST00000543233 A0A087X002 238 aa6.82□□□□□ -1.32
CDH4-201ENST00000543233 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
CDH4-201ENST00000543233 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
CDH4-201ENST00000543233 STARD9Q9P2P6 4700 aa6.81□□□□□ -1.32
CDH4-201ENST00000543233 NBDYA0A0U1RRE5 68 aa6.81□□□□□ -1.32
CDH4-201ENST00000543233 ZNF861PO60384 105 aa6.81□□□□□ -1.32
CDH4-201ENST00000543233 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
CDH4-201ENST00000543233 CDK2AP2O75956 126 aa6.77□□□□□ -1.33
CDH4-201ENST00000543233 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
CDH4-201ENST00000543233 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
CDH4-201ENST00000543233 C14orf177Q52M58 125 aa6.76□□□□□ -1.33
CDH4-201ENST00000543233 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
CDH4-201ENST00000543233 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
CDH4-201ENST00000543233 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
CDH4-201ENST00000543233 P0C880 135 aa6.74□□□□□ -1.33
CDH4-201ENST00000543233 IGLV9-49A0A0B4J1Y8 123 aa6.72□□□□□ -1.33
CDH4-201ENST00000543233 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
CDH4-201ENST00000543233 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
CDH4-201ENST00000543233 ANAPC11Q9NYG5 84 aa6.7□□□□□ -1.34
CDH4-201ENST00000543233 A8MUU9 505 aa6.7□□□□□ -1.34
CDH4-201ENST00000543233 LY6G6CO95867 125 aa6.68□□□□□ -1.34
CDH4-201ENST00000543233 A0A087WTM6 91 aa6.68□□□□□ -1.34
CDH4-201ENST00000543233 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
CDH4-201ENST00000543233 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
CDH4-201ENST00000543233 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
CDH4-201ENST00000543233 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
CDH4-201ENST00000543233 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.34
CDH4-201ENST00000543233 Q5W150 140 aa6.65□□□□□ -1.34
CDH4-201ENST00000543233 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.34
CDH4-201ENST00000543233 DYNC2H1Q8NCM8 4307 aaKnown RBP6.65□□□□□ -1.35
CDH4-201ENST00000543233 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
CDH4-201ENST00000543233 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
CDH4-201ENST00000543233 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
CDH4-201ENST00000543233 SPINK1P00995 79 aa6.63□□□□□ -1.35
CDH4-201ENST00000543233 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
CDH4-201ENST00000543233 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
CDH4-201ENST00000543233 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
CDH4-201ENST00000543233 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
CDH4-201ENST00000543233 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
CDH4-201ENST00000543233 HECTD4Q9Y4D8 3996 aa6.61□□□□□ -1.35
CDH4-201ENST00000543233 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
CDH4-201ENST00000543233 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
CDH4-201ENST00000543233 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.35
CDH4-201ENST00000543233 Q96NJ1 140 aa6.59□□□□□ -1.35
CDH4-201ENST00000543233 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
CDH4-201ENST00000543233 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
CDH4-201ENST00000543233 SPRR1BP22528 89 aa6.55□□□□□ -1.36
CDH4-201ENST00000543233 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
CDH4-201ENST00000543233 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
CDH4-201ENST00000543233 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
CDH4-201ENST00000543233 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
CDH4-201ENST00000543233 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
CDH4-201ENST00000543233 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
CDH4-201ENST00000543233 CIRBP-AS1Q8TBR5 109 aa6.51□□□□□ -1.37
CDH4-201ENST00000543233 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
CDH4-201ENST00000543233 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
CDH4-201ENST00000543233 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
CDH4-201ENST00000543233 IGKV2D-30A0A075B6S6 120 aa6.49□□□□□ -1.37
CDH4-201ENST00000543233 IGKV2-30P06310 120 aa6.49□□□□□ -1.37
CDH4-201ENST00000543233 H0YAA0 97 aa6.47□□□□□ -1.37
CDH4-201ENST00000543233 J3QL48 77 aa6.45□□□□□ -1.38
CDH4-201ENST00000543233 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
CDH4-201ENST00000543233 K7ERS5 55 aa6.45□□□□□ -1.38
CDH4-201ENST00000543233 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
CDH4-201ENST00000543233 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
CDH4-201ENST00000543233 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
CDH4-201ENST00000543233 Q6ZSA8 131 aa6.41□□□□□ -1.38
CDH4-201ENST00000543233 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
CDH4-201ENST00000543233 SACSQ9NZJ4 4579 aa6.39□□□□□ -1.39
CDH4-201ENST00000543233 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
CDH4-201ENST00000543233 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
CDH4-201ENST00000543233 A0A1B0GU33 70 aa6.37□□□□□ -1.39
CDH4-201ENST00000543233 Q8N1X5 172 aa6.37□□□□□ -1.39
CDH4-201ENST00000543233 RYR3Q15413 4870 aa6.34□□□□□ -1.39
CDH4-201ENST00000543233 PKHD1P08F94 4074 aa6.33□□□□□ -1.4
CDH4-201ENST00000543233 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
CDH4-201ENST00000543233 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
CDH4-201ENST00000543233 SMR3BP02814 79 aaPredicted RBP6.32□□□□□ -1.4
CDH4-201ENST00000543233 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
CDH4-201ENST00000543233 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
CDH4-201ENST00000543233 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
CDH4-201ENST00000543233 RYR2Q92736 4967 aa6.28□□□□□ -1.4
CDH4-201ENST00000543233 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
CDH4-201ENST00000543233 PKD1P98161 4303 aa6.27□□□□□ -1.4
CDH4-201ENST00000543233 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
CDH4-201ENST00000543233 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
CDH4-201ENST00000543233 FAT1Q14517 4588 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms