RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 LCE6AA0A183 80 aa6.33□□□□□ -1.4
NCAPD3-214ENST00000534548 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
NCAPD3-214ENST00000534548 Q8N1X5 172 aa6.33□□□□□ -1.4
NCAPD3-214ENST00000534548 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
NCAPD3-214ENST00000534548 TYMSOSQ8TAI1 123 aa6.3□□□□□ -1.4
NCAPD3-214ENST00000534548 APLNQ9ULZ1 77 aa6.3□□□□□ -1.4
NCAPD3-214ENST00000534548 PSORS1C2Q9UIG4 136 aa6.29□□□□□ -1.4
NCAPD3-214ENST00000534548 KRTAP26-1Q6PEX3 210 aa6.28□□□□□ -1.4
NCAPD3-214ENST00000534548 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
NCAPD3-214ENST00000534548 KMT2BQ9UMN6 2715 aaPredicted RBP6.27□□□□□ -1.41
NCAPD3-214ENST00000534548 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
NCAPD3-214ENST00000534548 SPRR1BP22528 89 aa6.26□□□□□ -1.41
NCAPD3-214ENST00000534548 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
NCAPD3-214ENST00000534548 A0A1B0GU33 70 aa6.25□□□□□ -1.41
NCAPD3-214ENST00000534548 STAB2Q8WWQ8 2551 aa6.24□□□□□ -1.41
NCAPD3-214ENST00000534548 Q6ZR54 194 aa6.23□□□□□ -1.41
NCAPD3-214ENST00000534548 A0A0D9SG42 100 aa6.23□□□□□ -1.41
NCAPD3-214ENST00000534548 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
NCAPD3-214ENST00000534548 Q5W150 140 aa6.23□□□□□ -1.41
NCAPD3-214ENST00000534548 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
NCAPD3-214ENST00000534548 K7EIL1 84 aa6.2□□□□□ -1.42
NCAPD3-214ENST00000534548 A0A087WTM6 91 aa6.2□□□□□ -1.42
NCAPD3-214ENST00000534548 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
NCAPD3-214ENST00000534548 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
NCAPD3-214ENST00000534548 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
NCAPD3-214ENST00000534548 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
NCAPD3-214ENST00000534548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
NCAPD3-214ENST00000534548 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
NCAPD3-214ENST00000534548 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
NCAPD3-214ENST00000534548 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
NCAPD3-214ENST00000534548 A0A087X002 238 aa6.07□□□□□ -1.44
NCAPD3-214ENST00000534548 NOTCH2NLQ7Z3S9 236 aa6.07□□□□□ -1.44
NCAPD3-214ENST00000534548 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
NCAPD3-214ENST00000534548 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
NCAPD3-214ENST00000534548 CSMD3Q7Z407 3707 aa6.04□□□□□ -1.44
NCAPD3-214ENST00000534548 ROMO1P60602 79 aa6.04□□□□□ -1.44
NCAPD3-214ENST00000534548 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
NCAPD3-214ENST00000534548 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
NCAPD3-214ENST00000534548 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
NCAPD3-214ENST00000534548 COL7A1Q02388 2944 aa6.01□□□□□ -1.45
NCAPD3-214ENST00000534548 PLAC8Q9NZF1 115 aa6.01□□□□□ -1.45
NCAPD3-214ENST00000534548 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
NCAPD3-214ENST00000534548 ANK2Q01484 3957 aa5.98□□□□□ -1.45
NCAPD3-214ENST00000534548 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
NCAPD3-214ENST00000534548 PANO1I0J062 215 aa5.96□□□□□ -1.46
NCAPD3-214ENST00000534548 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
NCAPD3-214ENST00000534548 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
NCAPD3-214ENST00000534548 Q6ZSA8 131 aa5.91□□□□□ -1.46
NCAPD3-214ENST00000534548 A0A0A0MQY5 61 aa5.9□□□□□ -1.46
NCAPD3-214ENST00000534548 M0R2T5 61 aa5.9□□□□□ -1.47
NCAPD3-214ENST00000534548 TGP01266 2768 aa5.88□□□□□ -1.47
NCAPD3-214ENST00000534548 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
NCAPD3-214ENST00000534548 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
NCAPD3-214ENST00000534548 A8MUU9 505 aa5.86□□□□□ -1.47
NCAPD3-214ENST00000534548 S4R3F8 94 aa5.85□□□□□ -1.47
NCAPD3-214ENST00000534548 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
NCAPD3-214ENST00000534548 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
NCAPD3-214ENST00000534548 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
NCAPD3-214ENST00000534548 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
NCAPD3-214ENST00000534548 SEC61BP60468 96 aaKnown RBP5.82□□□□□ -1.48
NCAPD3-214ENST00000534548 LYSTQ99698 3801 aa5.81□□□□□ -1.48
NCAPD3-214ENST00000534548 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
NCAPD3-214ENST00000534548 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
NCAPD3-214ENST00000534548 CMYA5Q8N3K9 4069 aa5.74□□□□□ -1.49
NCAPD3-214ENST00000534548 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
NCAPD3-214ENST00000534548 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
NCAPD3-214ENST00000534548 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.5
NCAPD3-214ENST00000534548 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
NCAPD3-214ENST00000534548 H0YAA0 97 aa5.69□□□□□ -1.5
NCAPD3-214ENST00000534548 R4GN34 69 aa5.69□□□□□ -1.5
NCAPD3-214ENST00000534548 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
NCAPD3-214ENST00000534548 KRTAP13-2Q52LG2 175 aa5.68□□□□□ -1.5
NCAPD3-214ENST00000534548 KRTAP10-1P60331 282 aa5.68□□□□□ -1.5
NCAPD3-214ENST00000534548 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
NCAPD3-214ENST00000534548 Q5VSD8 79 aa5.67□□□□□ -1.5
NCAPD3-214ENST00000534548 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
NCAPD3-214ENST00000534548 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
NCAPD3-214ENST00000534548 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
NCAPD3-214ENST00000534548 DNAH7Q8WXX0 4024 aa5.64□□□□□ -1.51
NCAPD3-214ENST00000534548 M0QZ58 72 aa5.64□□□□□ -1.51
NCAPD3-214ENST00000534548 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
NCAPD3-214ENST00000534548 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
NCAPD3-214ENST00000534548 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
NCAPD3-214ENST00000534548 STARD9Q9P2P6 4700 aa5.55□□□□□ -1.52
NCAPD3-214ENST00000534548 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
NCAPD3-214ENST00000534548 FRAS1Q86XX4 4008 aa5.52□□□□□ -1.53
NCAPD3-214ENST00000534548 KMT2AQ03164 3969 aa5.51□□□□□ -1.53
NCAPD3-214ENST00000534548 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
NCAPD3-214ENST00000534548 PRKDCP78527 4128 aaKnown RBP5.5□□□□□ -1.53
NCAPD3-214ENST00000534548 VPS13DQ5THJ4 4388 aa5.46□□□□□ -1.54
NCAPD3-214ENST00000534548 P0C880 135 aa5.45□□□□□ -1.54
NCAPD3-214ENST00000534548 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
NCAPD3-214ENST00000534548 DNAH17Q9UFH2 4485 aa5.44□□□□□ -1.54
NCAPD3-214ENST00000534548 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
NCAPD3-214ENST00000534548 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
NCAPD3-214ENST00000534548 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.55
NCAPD3-214ENST00000534548 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
NCAPD3-214ENST00000534548 DYNC2H1Q8NCM8 4307 aaKnown RBP5.38□□□□□ -1.55
NCAPD3-214ENST00000534548 DNHD1Q96M86 4753 aa5.38□□□□□ -1.55
NCAPD3-214ENST00000534548 LRP1BQ9NZR2 4599 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms