RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 LINC00575Q6W349 94 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 UQCR11O14957 56 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 P0C880 135 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 CCL18P55774 89 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
CSMD3-210ENST00000534172 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 CR1P17927 2039 aa1.98□□□□□ -2.09
CSMD3-210ENST00000534172 LINC00959A0A1B0GUT2 108 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 RNASE3P12724 160 aaKnown RBP1.97□□□□□ -2.09
CSMD3-210ENST00000534172 C9orf163Q8N9P6 203 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 DMAC1Q96GE9 116 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 R4GN34 69 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 K7EIM0 57 aa1.97□□□□□ -2.09
CSMD3-210ENST00000534172 A0A096LNT2 108 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 Q6ZQY7 126 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 HERC1Q15751 4861 aa1.96□□□□□ -2.1
CSMD3-210ENST00000534172 MUC2Q02817 5179 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 MRPL33O75394 65 aaKnown RBP1.95□□□□□ -2.1
CSMD3-210ENST00000534172 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 CNTRLQ7Z7A1 2325 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 SEC16AO15027 2179 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 RP1P56715 2156 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 DEFB110Q30KQ9 67 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 PRR9Q5T870 116 aa1.95□□□□□ -2.1
CSMD3-210ENST00000534172 ODF3BA8MYP8 253 aa1.94□□□□□ -2.1
CSMD3-210ENST00000534172 CCL3L1P16619 93 aa1.94□□□□□ -2.1
CSMD3-210ENST00000534172 COX6A2Q02221 97 aa1.94□□□□□ -2.1
CSMD3-210ENST00000534172 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
CSMD3-210ENST00000534172 CMYA5Q8N3K9 4069 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 PLCE1Q9P212 2302 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 DEFB131BA0A096LNP1 70 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 IGKV3-7A0A075B6H7 116 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 COX17Q14061 63 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 LY6EQ16553 131 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 Q8IZM0 81 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 DEFB104AQ8WTQ1 72 aa1.93□□□□□ -2.1
CSMD3-210ENST00000534172 LYSTQ99698 3801 aa1.92□□□□□ -2.1
CSMD3-210ENST00000534172 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
CSMD3-210ENST00000534172 HRES1P13985 223 aa1.92□□□□□ -2.1
CSMD3-210ENST00000534172 KRTAP13-2Q52LG2 175 aa1.92□□□□□ -2.1
CSMD3-210ENST00000534172 COL7A1Q02388 2944 aa1.92□□□□□ -2.1
CSMD3-210ENST00000534172 A0A1B0GU69 56 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 CCL26Q9Y258 94 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 SORL1Q92673 2214 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 IGKV3OR2-268A0A0C4DH90 116 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 KRTAP10-8P60410 259 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 IGFL1Q6UW32 110 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 SVEP1Q4LDE5 3571 aa1.91□□□□□ -2.1
CSMD3-210ENST00000534172 TRGV1A0A0A0MS02 117 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 APELAP0DMC3 54 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 K7EQZ3 153 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 IGLV6-57P01721 117 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 KLK9Q2XQG4 91 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 TOMM7Q9P0U1 55 aa1.9□□□□□ -2.11
CSMD3-210ENST00000534172 KNL1Q8NG31 2342 aa1.89□□□□□ -2.11
CSMD3-210ENST00000534172 LINC00472Q9H8W2 130 aa1.89□□□□□ -2.11
CSMD3-210ENST00000534172 ALMS1Q8TCU4 4167 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 A0A087WTM6 91 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 TP53AIP1Q9HCN2 124 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 KAAG1Q9UBP8 84 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 PSORS1C2Q9UIG4 136 aa1.88□□□□□ -2.11
CSMD3-210ENST00000534172 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CSMD3-210ENST00000534172 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
CSMD3-210ENST00000534172 DNAH3Q8TD57 4116 aa1.87□□□□□ -2.11
CSMD3-210ENST00000534172 ACYP2P14621 99 aa1.86□□□□□ -2.11
CSMD3-210ENST00000534172 PATE1Q8WXA2 126 aa1.86□□□□□ -2.11
CSMD3-210ENST00000534172 ANGP03950 147 aaKnown RBP1.86□□□□□ -2.11
CSMD3-210ENST00000534172 WFDC13Q8IUB5 93 aa1.86□□□□□ -2.11
CSMD3-210ENST00000534172 WFDC10BQ8IUB3 73 aa1.85□□□□□ -2.11
CSMD3-210ENST00000534172 KMT2AQ03164 3969 aa1.85□□□□□ -2.11
CSMD3-210ENST00000534172 AKAP6Q13023 2319 aa1.85□□□□□ -2.11
CSMD3-210ENST00000534172 MINOS1Q5TGZ0 78 aa1.84□□□□□ -2.11
CSMD3-210ENST00000534172 CCL19Q99731 98 aa1.84□□□□□ -2.11
CSMD3-210ENST00000534172 HMCN2Q8NDA2 5059 aa1.84□□□□□ -2.11
CSMD3-210ENST00000534172 DNAH9Q9NYC9 4486 aa1.84□□□□□ -2.11
CSMD3-210ENST00000534172 A8MTW9 85 aa1.84□□□□□ -2.12
CSMD3-210ENST00000534172 PCOTHQ58A44 107 aa1.84□□□□□ -2.12
CSMD3-210ENST00000534172 DNAH7Q8WXX0 4024 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 IGKV2-24A0A0C4DH68 120 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 A0A0G2JQZ4 141 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 LYNX1G3V0Z9 82 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 LINC00304Q8N9R0 145 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
CSMD3-210ENST00000534172 DNAH10Q8IVF4 4471 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 HRNRQ86YZ3 2850 aaPredicted RBP1.83□□□□□ -2.12
CSMD3-210ENST00000534172 SPTY2D1-AS1A0A0U1RR47 76 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 DEFB108BQ8NET1 73 aa1.83□□□□□ -2.12
CSMD3-210ENST00000534172 Q96NJ1 140 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms