RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SORL1Q92673 2214 aa4.05□□□□□ -1.76
CLCN3-203ENST00000502998 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
CLCN3-203ENST00000502998 TOMM7Q9P0U1 55 aa4.05□□□□□ -1.76
CLCN3-203ENST00000502998 IGLV8-61A0A075B6I0 122 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 IGLV5-48A0A075B6I7 105 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 A0A1B0GU69 56 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 A8MUU9 505 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 IGLV6-57P01721 117 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 HRES1P13985 223 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 DEFB136Q30KP8 78 aa4.04□□□□□ -1.76
CLCN3-203ENST00000502998 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
CLCN3-203ENST00000502998 IGKV3OR2-268A0A0C4DH90 116 aa4.03□□□□□ -1.76
CLCN3-203ENST00000502998 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
CLCN3-203ENST00000502998 Q5W150 140 aa4.03□□□□□ -1.76
CLCN3-203ENST00000502998 HERC2O95714 4834 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 TRGV1A0A0A0MS02 117 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
CLCN3-203ENST00000502998 G3V318 75 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 K7EQZ3 153 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 C4orf3Q8WVX3 66 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 WWC2-AS2Q96NR7 200 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 STARD9Q9P2P6 4700 aa4.02□□□□□ -1.77
CLCN3-203ENST00000502998 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
CLCN3-203ENST00000502998 CIRBP-AS1Q8TBR5 109 aa4.01□□□□□ -1.77
CLCN3-203ENST00000502998 DHRS4-AS1Q9P1J3 65 aa4.01□□□□□ -1.77
CLCN3-203ENST00000502998 Q8NBF4 154 aa4□□□□□ -1.77
CLCN3-203ENST00000502998 TP53AIP1Q9HCN2 124 aa4□□□□□ -1.77
CLCN3-203ENST00000502998 SLURP1P55000 103 aa3.99□□□□□ -1.77
CLCN3-203ENST00000502998 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
CLCN3-203ENST00000502998 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
CLCN3-203ENST00000502998 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
CLCN3-203ENST00000502998 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
CLCN3-203ENST00000502998 ACYP2P14621 99 aa3.96□□□□□ -1.78
CLCN3-203ENST00000502998 WFDC13Q8IUB5 93 aa3.96□□□□□ -1.78
CLCN3-203ENST00000502998 PLECQ15149 4684 aaKnown RBP3.96□□□□□ -1.78
CLCN3-203ENST00000502998 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
CLCN3-203ENST00000502998 A0A087WTM6 91 aa3.94□□□□□ -1.78
CLCN3-203ENST00000502998 H3BUA1 57 aa3.94□□□□□ -1.78
CLCN3-203ENST00000502998 PANO1I0J062 215 aa3.94□□□□□ -1.78
CLCN3-203ENST00000502998 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
CLCN3-203ENST00000502998 ANGP03950 147 aaKnown RBP3.93□□□□□ -1.78
CLCN3-203ENST00000502998 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
CLCN3-203ENST00000502998 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
CLCN3-203ENST00000502998 WFDC10BQ8IUB3 73 aa3.93□□□□□ -1.78
CLCN3-203ENST00000502998 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
CLCN3-203ENST00000502998 A0A0J9YWU9 116 aa3.92□□□□□ -1.78
CLCN3-203ENST00000502998 INSP01308 110 aa3.92□□□□□ -1.78
CLCN3-203ENST00000502998 USMG5Q96IX5 58 aa3.92□□□□□ -1.78
CLCN3-203ENST00000502998 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
CLCN3-203ENST00000502998 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
CLCN3-203ENST00000502998 Q6ZSN1 163 aa3.91□□□□□ -1.78
CLCN3-203ENST00000502998 A8MTW9 85 aa3.9□□□□□ -1.79
CLCN3-203ENST00000502998 IGKV2-24A0A0C4DH68 120 aa3.89□□□□□ -1.79
CLCN3-203ENST00000502998 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
CLCN3-203ENST00000502998 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
CLCN3-203ENST00000502998 Q8N377 158 aa3.88□□□□□ -1.79
CLCN3-203ENST00000502998 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
CLCN3-203ENST00000502998 GVQW2A0A096LPI5 108 aaPredicted RBP3.87□□□□□ -1.79
CLCN3-203ENST00000502998 DEFB116Q30KQ4 102 aa3.87□□□□□ -1.79
CLCN3-203ENST00000502998 C6orf48Q9UBA6 75 aa3.87□□□□□ -1.79
CLCN3-203ENST00000502998 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
CLCN3-203ENST00000502998 DEFB1P60022 68 aa3.86□□□□□ -1.79
CLCN3-203ENST00000502998 Q96NJ1 140 aa3.86□□□□□ -1.79
CLCN3-203ENST00000502998 VPS13DQ5THJ4 4388 aa3.85□□□□□ -1.79
CLCN3-203ENST00000502998 SPINK13Q1W4C9 94 aa3.85□□□□□ -1.79
CLCN3-203ENST00000502998 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
CLCN3-203ENST00000502998 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
CLCN3-203ENST00000502998 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
CLCN3-203ENST00000502998 NBDYA0A0U1RRE5 68 aa3.84□□□□□ -1.79
CLCN3-203ENST00000502998 DEFB131AP59861 70 aa3.84□□□□□ -1.79
CLCN3-203ENST00000502998 A0A1B0GUV1 79 aa3.83□□□□□ -1.8
CLCN3-203ENST00000502998 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
CLCN3-203ENST00000502998 LY6G6CO95867 125 aa3.82□□□□□ -1.8
CLCN3-203ENST00000502998 DEFB135Q30KP9 77 aa3.82□□□□□ -1.8
CLCN3-203ENST00000502998 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 A0A1B0GU33 70 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 DNAH2Q9P225 4427 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 HERC1Q15751 4861 aa3.81□□□□□ -1.8
CLCN3-203ENST00000502998 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
CLCN3-203ENST00000502998 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
CLCN3-203ENST00000502998 HSPG2P98160 4391 aa3.79□□□□□ -1.8
CLCN3-203ENST00000502998 DNAH6Q9C0G6 4158 aa3.79□□□□□ -1.8
CLCN3-203ENST00000502998 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
CLCN3-203ENST00000502998 RPL37AP61513 92 aaKnown RBP3.78□□□□□ -1.8
CLCN3-203ENST00000502998 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
CLCN3-203ENST00000502998 DEFB4AO15263 64 aa3.77□□□□□ -1.81
CLCN3-203ENST00000502998 A0A1W2PNN7 141 aa3.76□□□□□ -1.81
CLCN3-203ENST00000502998 CLPSL2Q6UWE3 100 aa3.76□□□□□ -1.81
CLCN3-203ENST00000502998 DNAH17Q9UFH2 4485 aa3.76□□□□□ -1.81
CLCN3-203ENST00000502998 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
CLCN3-203ENST00000502998 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
CLCN3-203ENST00000502998 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
CLCN3-203ENST00000502998 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
CLCN3-203ENST00000502998 Q6ZRX8 168 aa3.74□□□□□ -1.81
CLCN3-203ENST00000502998 APLNQ9ULZ1 77 aa3.74□□□□□ -1.81
CLCN3-203ENST00000502998 HTN1P15515 57 aa3.73□□□□□ -1.81
CLCN3-203ENST00000502998 IGFL1Q6UW32 110 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms