RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PARP4Q9UKK3 1724 aaKnown RBP-2.17□□□□□ -2.76
SMAD1-203ENST00000502342 CEBPZOSA8MTT3 80 aa-2.18□□□□□ -2.76
SMAD1-203ENST00000502342 ANKRD26Q9UPS8 1709 aa-2.18□□□□□ -2.76
SMAD1-203ENST00000502342 TLN1Q9Y490 2541 aaKnown RBP-2.18□□□□□ -2.76
SMAD1-203ENST00000502342 TRRAPQ9Y4A5 3859 aa-2.18□□□□□ -2.76
SMAD1-203ENST00000502342 DMXL2Q8TDJ6 3036 aa-2.18□□□□□ -2.76
SMAD1-203ENST00000502342 ITSN1Q15811 1721 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 TOGARAM1Q9Y4F4 1720 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 CCNB3Q8WWL7 1395 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 MMP24-AS1A0A0U1RRL7 71 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 UMAD1C9J7I0 102 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 TNP1P09430 55 aa-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 THOC2Q8NI27 1593 aaKnown RBP-2.19□□□□□ -2.76
SMAD1-203ENST00000502342 ZFHX4Q86UP3 3567 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 ADGRG4Q8IZF6 3080 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 PLCH1Q4KWH8 1693 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 NDUFA4O00483 81 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 BOD1L1Q8NFC6 3051 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 CDC42BPAQ5VT25 1732 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 CCDC88BA6NC98 1476 aa-2.2□□□□□ -2.76
SMAD1-203ENST00000502342 RABAC1Q9UI14 185 aa-2.21□□□□□ -2.76
SMAD1-203ENST00000502342 M0R143 59 aa-2.22□□□□□ -2.76
SMAD1-203ENST00000502342 SPTBN5Q9NRC6 3674 aaKnown RBP-2.22□□□□□ -2.76
SMAD1-203ENST00000502342 SNRPFP62306 86 aaKnown RBP-2.23□□□□□ -2.77
SMAD1-203ENST00000502342 KIAA0586Q9BVV6 1533 aa-2.23□□□□□ -2.77
SMAD1-203ENST00000502342 PIK3C2BO00750 1634 aa-2.24□□□□□ -2.77
SMAD1-203ENST00000502342 DNAH10Q8IVF4 4471 aa-2.24□□□□□ -2.77
SMAD1-203ENST00000502342 MT1GP13640 62 aa-2.24□□□□□ -2.77
SMAD1-203ENST00000502342 LINC00643Q86TS7 51 aa-2.24□□□□□ -2.77
SMAD1-203ENST00000502342 AKAP12Q02952 1782 aa-2.24□□□□□ -2.77
SMAD1-203ENST00000502342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.25□□□□□ -2.77
SMAD1-203ENST00000502342 MT1EP04732 61 aa-2.25□□□□□ -2.77
SMAD1-203ENST00000502342 ITSN2Q9NZM3 1697 aa-2.25□□□□□ -2.77
SMAD1-203ENST00000502342 IGLV5-48A0A075B6I7 105 aa-2.26□□□□□ -2.77
SMAD1-203ENST00000502342 WT1-ASQ06250 92 aa-2.26□□□□□ -2.77
SMAD1-203ENST00000502342 KRTAP8-1Q8IUC2 63 aa-2.26□□□□□ -2.77
SMAD1-203ENST00000502342 ZC3H13Q5T200 1668 aaKnown RBP-2.26□□□□□ -2.77
SMAD1-203ENST00000502342 DEFB131BA0A096LNP1 70 aa-2.27□□□□□ -2.77
SMAD1-203ENST00000502342 MRPL33O75394 65 aaKnown RBP-2.27□□□□□ -2.77
SMAD1-203ENST00000502342 MT1LQ93083 61 aa-2.27□□□□□ -2.77
SMAD1-203ENST00000502342 NREPQ16612 68 aa-2.28□□□□□ -2.77
SMAD1-203ENST00000502342 LY75O60449 1722 aa-2.3□□□□□ -2.78
SMAD1-203ENST00000502342 RICTORQ6R327 1708 aa-2.3□□□□□ -2.78
SMAD1-203ENST00000502342 KIF1AQ12756 1690 aa-2.3□□□□□ -2.78
SMAD1-203ENST00000502342 CFAP43Q8NDM7 1665 aa-2.31□□□□□ -2.78
SMAD1-203ENST00000502342 SNHG12Q9BXW3 62 aa-2.31□□□□□ -2.78
SMAD1-203ENST00000502342 PYY3Q5JQD4 70 aa-2.32□□□□□ -2.78
SMAD1-203ENST00000502342 S100A16Q96FQ6 103 aaKnown RBP-2.32□□□□□ -2.78
SMAD1-203ENST00000502342 ATMQ13315 3056 aa-2.32□□□□□ -2.78
SMAD1-203ENST00000502342 TJP1Q07157 1748 aa-2.33□□□□□ -2.78
SMAD1-203ENST00000502342 KIF14Q15058 1648 aa-2.33□□□□□ -2.78
SMAD1-203ENST00000502342 MAP3K4Q9Y6R4 1608 aa-2.33□□□□□ -2.78
SMAD1-203ENST00000502342 HFM1A2PYH4 1435 aa-2.34□□□□□ -2.78
SMAD1-203ENST00000502342 PVALEFA0A1B0GWK0 134 aa-2.34□□□□□ -2.78
SMAD1-203ENST00000502342 NRAPQ86VF7 1730 aa-2.34□□□□□ -2.78
SMAD1-203ENST00000502342 BVES-AS1Q5T3Y7 98 aa-2.35□□□□□ -2.79
SMAD1-203ENST00000502342 ATP5EP2Q5VTU8 51 aa-2.35□□□□□ -2.79
SMAD1-203ENST00000502342 MGAQ8IWI9 3026 aa-2.35□□□□□ -2.79
SMAD1-203ENST00000502342 RPS27P42677 84 aaKnown RBP-2.36□□□□□ -2.79
SMAD1-203ENST00000502342 PKIAP61925 76 aa-2.36□□□□□ -2.79
SMAD1-203ENST00000502342 MINOS1Q5TGZ0 78 aa-2.36□□□□□ -2.79
SMAD1-203ENST00000502342 RPS27LQ71UM5 84 aaKnown RBP-2.36□□□□□ -2.79
SMAD1-203ENST00000502342 PRUNE2Q8WUY3 3088 aa-2.36□□□□□ -2.79
SMAD1-203ENST00000502342 ARHGAP35Q9NRY4 1499 aa-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 A0A087WXM4 84 aa-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 HMGA1P17096 107 aaKnown RBP-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 UBL5Q9BZL1 73 aa-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 NOP10Q9NPE3 64 aaKnown RBP-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 VPS8Q8N3P4 1428 aa-2.37□□□□□ -2.79
SMAD1-203ENST00000502342 CSMD2Q7Z408 3487 aa-2.38□□□□□ -2.79
SMAD1-203ENST00000502342 H3BUA1 57 aa-2.38□□□□□ -2.79
SMAD1-203ENST00000502342 LRRIQ1Q96JM4 1722 aa-2.38□□□□□ -2.79
SMAD1-203ENST00000502342 ABCC3O15438 1527 aa-2.38□□□□□ -2.79
SMAD1-203ENST00000502342 CRIP1P50238 77 aa-2.39□□□□□ -2.79
SMAD1-203ENST00000502342 Q9H521 79 aa-2.39□□□□□ -2.79
SMAD1-203ENST00000502342 RNF17Q9BXT8 1623 aaKnown RBP-2.39□□□□□ -2.79
SMAD1-203ENST00000502342 FREM2Q5SZK8 3169 aa-2.39□□□□□ -2.79
SMAD1-203ENST00000502342 KCNQ1DNQ9H478 68 aa-2.4□□□□□ -2.79
SMAD1-203ENST00000502342 PPLO60437 1756 aa-2.41□□□□□ -2.79
SMAD1-203ENST00000502342 KANTRA0A1W2PQU2 76 aa-2.41□□□□□ -2.8
SMAD1-203ENST00000502342 S100A8P05109 93 aa-2.41□□□□□ -2.8
SMAD1-203ENST00000502342 RALGAPBQ86X10 1494 aa-2.41□□□□□ -2.8
SMAD1-203ENST00000502342 CDC42BPGQ6DT37 1551 aa-2.42□□□□□ -2.8
SMAD1-203ENST00000502342 INO80Q9ULG1 1556 aaPredicted RBP-2.42□□□□□ -2.8
SMAD1-203ENST00000502342 PEG3Q9GZU2 1588 aa-2.43□□□□□ -2.8
SMAD1-203ENST00000502342 MAST1Q9Y2H9 1570 aa-2.43□□□□□ -2.8
SMAD1-203ENST00000502342 KDM5DQ9BY66 1539 aa-2.43□□□□□ -2.8
SMAD1-203ENST00000502342 MT1FP04733 61 aa-2.44□□□□□ -2.8
SMAD1-203ENST00000502342 SMIM13P0DJ93 91 aa-2.44□□□□□ -2.8
SMAD1-203ENST00000502342 FCER1GP30273 86 aa-2.44□□□□□ -2.8
SMAD1-203ENST00000502342 C6orf48Q9UBA6 75 aa-2.46□□□□□ -2.8
SMAD1-203ENST00000502342 TTC37Q6PGP7 1564 aa-2.47□□□□□ -2.8
SMAD1-203ENST00000502342 SFTA3P0C7M3 94 aa-2.47□□□□□ -2.8
SMAD1-203ENST00000502342 NCBP2-AS2Q69YL0 99 aa-2.47□□□□□ -2.8
SMAD1-203ENST00000502342 V9GYS6 101 aa-2.47□□□□□ -2.8
SMAD1-203ENST00000502342 LINC01546A6NGU7 62 aa-2.48□□□□□ -2.81
SMAD1-203ENST00000502342 NHSQ6T4R5 1651 aa-2.5□□□□□ -2.81
SMAD1-203ENST00000502342 DMDP11532 3685 aa-2.5□□□□□ -2.81
SMAD1-203ENST00000502342 CENPEQ02224 2701 aa-2.5□□□□□ -2.81
SMAD1-203ENST00000502342 SPEGQ15772 3267 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms