RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 LINC00313P59037 77 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 RBM3P98179 157 aaKnown RBP3.18□□□□□ -1.9
SPTA1-209ENST00000498708 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 AMELXQ99217 191 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 NEBP20929 6669 aa3.18□□□□□ -1.9
SPTA1-209ENST00000498708 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 LINC01546A6NGU7 62 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 CFC1BP0CG36 223 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 PRLHP81277 87 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
SPTA1-209ENST00000498708 TRAV7A0A075B6U4 112 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 A0A1B0GW54 56 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 IGIPA6NJ69 53 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 A6NN06 94 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 ERC2-IT1O76042 136 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 PLNP26678 52 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 COX7B2Q8TF08 81 aa3.16□□□□□ -1.9
SPTA1-209ENST00000498708 SMIM1B2RUZ4 78 aa3.15□□□□□ -1.91
SPTA1-209ENST00000498708 SEC61BP60468 96 aaKnown RBP3.15□□□□□ -1.91
SPTA1-209ENST00000498708 SCGB3A1Q96QR1 104 aa3.15□□□□□ -1.91
SPTA1-209ENST00000498708 IGHV6-1A0A0B4J1U7 121 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 COX6CP09669 75 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 FAM229BQ4G0N7 80 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 KRTAP13-1Q8IUC0 172 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 SMCR5Q8TEV8 140 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 ZNF625Q96I27 306 aaPredicted RBP3.14□□□□□ -1.91
SPTA1-209ENST00000498708 HIGD2AQ9BW72 106 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 CYP4F30PQ9H0H9 118 aa3.14□□□□□ -1.91
SPTA1-209ENST00000498708 IGLV5-37A0A075B6J1 123 aa3.13□□□□□ -1.91
SPTA1-209ENST00000498708 A0A096LNJ9 63 aa3.13□□□□□ -1.91
SPTA1-209ENST00000498708 CFC1P0CG37 223 aa3.13□□□□□ -1.91
SPTA1-209ENST00000498708 ZNF22P17026 224 aaPredicted RBP3.13□□□□□ -1.91
SPTA1-209ENST00000498708 C20orf197Q8N268 126 aa3.13□□□□□ -1.91
SPTA1-209ENST00000498708 TRAV12-1A0A0B4J245 112 aa3.12□□□□□ -1.91
SPTA1-209ENST00000498708 Q8NDZ9 215 aa3.12□□□□□ -1.91
SPTA1-209ENST00000498708 TMEM223A0PJW6 202 aa3.11□□□□□ -1.91
SPTA1-209ENST00000498708 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
SPTA1-209ENST00000498708 K7EMI3 77 aa3.11□□□□□ -1.91
SPTA1-209ENST00000498708 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
SPTA1-209ENST00000498708 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
SPTA1-209ENST00000498708 F8WEM9 126 aa3.1□□□□□ -1.91
SPTA1-209ENST00000498708 Q8NBF4 154 aa3.1□□□□□ -1.91
SPTA1-209ENST00000498708 CLEC2BQ92478 149 aa3.1□□□□□ -1.91
SPTA1-209ENST00000498708 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
SPTA1-209ENST00000498708 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
SPTA1-209ENST00000498708 NCR3O14931 201 aa3.09□□□□□ -1.91
SPTA1-209ENST00000498708 LINC00158P58513 81 aa3.09□□□□□ -1.91
SPTA1-209ENST00000498708 KRTAP13-3Q3SY46 172 aa3.09□□□□□ -1.91
SPTA1-209ENST00000498708 SPAG11AQ6PDA7 123 aa3.09□□□□□ -1.91
SPTA1-209ENST00000498708 M0R2T5 61 aa3.08□□□□□ -1.92
SPTA1-209ENST00000498708 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
SPTA1-209ENST00000498708 LIMD2Q9BT23 127 aa3.08□□□□□ -1.92
SPTA1-209ENST00000498708 IGLV9-49A0A0B4J1Y8 123 aa3.07□□□□□ -1.92
SPTA1-209ENST00000498708 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
SPTA1-209ENST00000498708 DNAL4O96015 105 aa3.07□□□□□ -1.92
SPTA1-209ENST00000498708 TRBV7-4A0A0J9YYF1 115 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 ETDCA0A1B0GVM5 59 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 C11orf86A6NJI1 115 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 ZNF815PA8K554 130 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 MOBPQ13875 183 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 SOSTDC1Q6X4U4 206 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 CDC42SE1Q9NRR8 79 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 NDUFA12Q9UI09 145 aa3.06□□□□□ -1.92
SPTA1-209ENST00000498708 ZNF706Q9Y5V0 76 aaPredicted RBP3.06□□□□□ -1.92
SPTA1-209ENST00000498708 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
SPTA1-209ENST00000498708 COX17Q14061 63 aa3.05□□□□□ -1.92
SPTA1-209ENST00000498708 OBSCN-AS1Q96MR7 158 aa3.05□□□□□ -1.92
SPTA1-209ENST00000498708 SPINK1P00995 79 aa3.04□□□□□ -1.92
SPTA1-209ENST00000498708 Q1RN00 199 aa3.04□□□□□ -1.92
SPTA1-209ENST00000498708 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
SPTA1-209ENST00000498708 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
SPTA1-209ENST00000498708 TTTY13Q9BZ97 58 aa3.04□□□□□ -1.92
SPTA1-209ENST00000498708 C9orf92A6NGG3 77 aa3.03□□□□□ -1.92
SPTA1-209ENST00000498708 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
SPTA1-209ENST00000498708 ADAMTSL4-AS1Q5T5F5 129 aa3.03□□□□□ -1.92
SPTA1-209ENST00000498708 Q5VV11 94 aa3.03□□□□□ -1.92
SPTA1-209ENST00000498708 Q8N377 158 aa3.03□□□□□ -1.92
SPTA1-209ENST00000498708 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 LOC101927531A0A1B0GV80 90 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 LEPROTO15243 131 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 SPRR1AP35321 89 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 SFTA2Q6UW10 78 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 KCNQ1DNQ9H478 68 aa3.02□□□□□ -1.93
SPTA1-209ENST00000498708 A0A087WVE0 104 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 A0A0J9YXY3 114 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 PCOTHQ58A44 107 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 SSBP3-AS1Q7Z2R9 100 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 TMEM254Q8TBM7 123 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 Q9BRP9 147 aa3.01□□□□□ -1.93
SPTA1-209ENST00000498708 IGKV3D-7A0A0C4DH55 119 aa3□□□□□ -1.93
SPTA1-209ENST00000498708 ELOF1P60002 83 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms