RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 HCG22E2RYF7 251 aa2.69□□□□□ -1.98
SSR3-209ENST00000498205 C3orf84H3BNL1 204 aa2.68□□□□□ -1.98
SSR3-209ENST00000498205 UBE2AP49459 152 aa2.68□□□□□ -1.98
SSR3-209ENST00000498205 RETNQ9HD89 108 aa2.68□□□□□ -1.98
SSR3-209ENST00000498205 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 Q1T7F1 81 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 IGFL1Q6UW32 110 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 FP248Q71RG6 208 aaPredicted RBP2.67□□□□□ -1.98
SSR3-209ENST00000498205 C9orf163Q8N9P6 203 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 SNURFQ9Y675 71 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 V9GYY9 64 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 CMYA5Q8N3K9 4069 aa2.67□□□□□ -1.98
SSR3-209ENST00000498205 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
SSR3-209ENST00000498205 A8MWP4 228 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 MP68P56378 58 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 UBE2BP63146 152 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 ASB16-AS1Q495Z4 193 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 C1orf195Q5TG92 126 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 SCXQ7RTU7 201 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 KRTAP13-1Q8IUC0 172 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 PRR15Q8IV56 129 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 LINC00472Q9H8W2 130 aa2.66□□□□□ -1.98
SSR3-209ENST00000498205 A0A096LNI7 61 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 K7EQZ3 153 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 PSCAO43653 123 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 C4orf26Q17RF5 130 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 ST20-AS1Q8NBB2 130 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 DEFB105AQ8NG35 78 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 TP53AIP1Q9HCN2 124 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 DNHD1Q96M86 4753 aa2.65□□□□□ -1.99
SSR3-209ENST00000498205 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
SSR3-209ENST00000498205 TRAV22A0A0B4J277 110 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 K7EIL1 84 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 MOBPQ13875 183 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 HRCT1Q6UXD1 115 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 B9D2Q9BPU9 175 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 APLNQ9ULZ1 77 aa2.64□□□□□ -1.99
SSR3-209ENST00000498205 ZNF706Q9Y5V0 76 aaPredicted RBP2.64□□□□□ -1.99
SSR3-209ENST00000498205 A0A087WSZ3 146 aa2.63□□□□□ -1.99
SSR3-209ENST00000498205 A0A1W2PNN7 141 aa2.63□□□□□ -1.99
SSR3-209ENST00000498205 NUPR2A6NF83 97 aa2.63□□□□□ -1.99
SSR3-209ENST00000498205 HIGD2AQ9BW72 106 aa2.63□□□□□ -1.99
SSR3-209ENST00000498205 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
SSR3-209ENST00000498205 Q6ZRN7 208 aaPredicted RBP2.62□□□□□ -1.99
SSR3-209ENST00000498205 LINC00336Q6ZUF6 198 aa2.62□□□□□ -1.99
SSR3-209ENST00000498205 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
SSR3-209ENST00000498205 NBDYA0A0U1RRE5 68 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 CD164Q04900 197 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 CASC2Q6XLA1 102 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
SSR3-209ENST00000498205 MMP24-AS1A0A0U1RRL7 71 aa2.6□□□□□ -1.99
SSR3-209ENST00000498205 PRLHP81277 87 aa2.6□□□□□ -1.99
SSR3-209ENST00000498205 DNAH9Q9NYC9 4486 aa2.6□□□□□ -1.99
SSR3-209ENST00000498205 LOC101927531A0A1B0GV80 90 aa2.59□□□□□ -1.99
SSR3-209ENST00000498205 UBE2DNLQ8IWF7 75 aa2.59□□□□□ -1.99
SSR3-209ENST00000498205 Q96NJ1 140 aa2.59□□□□□ -1.99
SSR3-209ENST00000498205 PLAC8Q9NZF1 115 aa2.59□□□□□ -1.99
SSR3-209ENST00000498205 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
SSR3-209ENST00000498205 H0Y9P7 68 aa2.58□□□□□ -2
SSR3-209ENST00000498205 LINC00208Q96KT6 92 aa2.58□□□□□ -2
SSR3-209ENST00000498205 LYSTQ99698 3801 aa2.58□□□□□ -2
SSR3-209ENST00000498205 A0A1B0GVX0 72 aa2.57□□□□□ -2
SSR3-209ENST00000498205 FAM229BQ4G0N7 80 aa2.57□□□□□ -2
SSR3-209ENST00000498205 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
SSR3-209ENST00000498205 PHF5AQ7RTV0 110 aaKnown RBP2.57□□□□□ -2
SSR3-209ENST00000498205 SSBP3-AS1Q7Z2R9 100 aa2.57□□□□□ -2
SSR3-209ENST00000498205 SRRM2Q9UQ35 2752 aaKnown RBP2.57□□□□□ -2
SSR3-209ENST00000498205 VPS13DQ5THJ4 4388 aa2.56□□□□□ -2
SSR3-209ENST00000498205 COL7A1Q02388 2944 aa2.56□□□□□ -2
SSR3-209ENST00000498205 A0A087WTM6 91 aa2.56□□□□□ -2
SSR3-209ENST00000498205 C8orf87E5RJ46 101 aa2.56□□□□□ -2
SSR3-209ENST00000498205 WFDC13Q8IUB5 93 aa2.56□□□□□ -2
SSR3-209ENST00000498205 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
SSR3-209ENST00000498205 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
SSR3-209ENST00000498205 DNAH7Q8WXX0 4024 aa2.56□□□□□ -2
SSR3-209ENST00000498205 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
SSR3-209ENST00000498205 BRK1Q8WUW1 75 aa2.55□□□□□ -2
SSR3-209ENST00000498205 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
SSR3-209ENST00000498205 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
SSR3-209ENST00000498205 DNAH10Q8IVF4 4471 aa2.54□□□□□ -2
SSR3-209ENST00000498205 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
SSR3-209ENST00000498205 Q5W150 140 aa2.54□□□□□ -2
SSR3-209ENST00000498205 LINC01558Q9Y6Z2 57 aa2.54□□□□□ -2
SSR3-209ENST00000498205 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
SSR3-209ENST00000498205 Q5VV11 94 aa2.53□□□□□ -2
SSR3-209ENST00000498205 ATP11AUNQ6ZP68 121 aa2.53□□□□□ -2
SSR3-209ENST00000498205 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
SSR3-209ENST00000498205 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2
SSR3-209ENST00000498205 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2
SSR3-209ENST00000498205 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2.01
SSR3-209ENST00000498205 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
SSR3-209ENST00000498205 COA5Q86WW8 74 aa2.52□□□□□ -2.01
SSR3-209ENST00000498205 TGP01266 2768 aa2.51□□□□□ -2.01
SSR3-209ENST00000498205 A0A0G2JQZ4 141 aa2.51□□□□□ -2.01
SSR3-209ENST00000498205 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
SSR3-209ENST00000498205 Q6ZSA8 131 aa2.51□□□□□ -2.01
SSR3-209ENST00000498205 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 1151.6 ms