RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
SSBP1-213ENST00000496622 ASB16-AS1Q495Z4 193 aa3.9□□□□□ -1.79
SSBP1-213ENST00000496622 NUPR2A6NF83 97 aa3.89□□□□□ -1.79
SSBP1-213ENST00000496622 NBDYA0A0U1RRE5 68 aa3.89□□□□□ -1.79
SSBP1-213ENST00000496622 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
SSBP1-213ENST00000496622 Q6ZR54 194 aa3.89□□□□□ -1.79
SSBP1-213ENST00000496622 FRAS1Q86XX4 4008 aa3.88□□□□□ -1.79
SSBP1-213ENST00000496622 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
SSBP1-213ENST00000496622 LY6G6CO95867 125 aa3.88□□□□□ -1.79
SSBP1-213ENST00000496622 SPINK7P58062 85 aa3.88□□□□□ -1.79
SSBP1-213ENST00000496622 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
SSBP1-213ENST00000496622 A0A096LNI7 61 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 A0A1W2PNM2 257 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 H0YGX0 51 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 PANO1I0J062 215 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 MUC7Q8TAX7 377 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 C7orf33Q8WU49 177 aa3.87□□□□□ -1.79
SSBP1-213ENST00000496622 A0A1W2PNN7 141 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 RTL8CO15255 209 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 ZCCHC13Q8WW36 166 aaKnown RBP3.86□□□□□ -1.79
SSBP1-213ENST00000496622 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 HERC1Q15751 4861 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 Q6ZQY7 126 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
SSBP1-213ENST00000496622 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
SSBP1-213ENST00000496622 P0C880 135 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 Q6ZQT0 140 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
SSBP1-213ENST00000496622 A0A087X002 238 aa3.84□□□□□ -1.79
SSBP1-213ENST00000496622 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.8
SSBP1-213ENST00000496622 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.8
SSBP1-213ENST00000496622 MUC2Q02817 5179 aa3.84□□□□□ -1.8
SSBP1-213ENST00000496622 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
SSBP1-213ENST00000496622 Q8N9L7 120 aa3.83□□□□□ -1.8
SSBP1-213ENST00000496622 Q9BRP9 147 aa3.83□□□□□ -1.8
SSBP1-213ENST00000496622 TLX1NBP0CAT3 122 aa3.82□□□□□ -1.8
SSBP1-213ENST00000496622 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
SSBP1-213ENST00000496622 IGKV4-1P06312 121 aa3.82□□□□□ -1.8
SSBP1-213ENST00000496622 COX7BP24311 80 aa3.82□□□□□ -1.8
SSBP1-213ENST00000496622 ST20-AS1Q8NBB2 130 aa3.82□□□□□ -1.8
SSBP1-213ENST00000496622 A0A087WTM6 91 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 LOC110117498A0A087WWA1 95 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 CNBPP62633 177 aaKnown RBP3.81□□□□□ -1.8
SSBP1-213ENST00000496622 PRLHP81277 87 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 C9orf163Q8N9P6 203 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 KCNQ1DNQ9H478 68 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
SSBP1-213ENST00000496622 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 NDUFB1O75438 58 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 PDE6GP18545 87 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
SSBP1-213ENST00000496622 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
SSBP1-213ENST00000496622 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
SSBP1-213ENST00000496622 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
SSBP1-213ENST00000496622 Q6ZRX8 168 aa3.78□□□□□ -1.8
SSBP1-213ENST00000496622 ETDCA0A1B0GVM5 59 aa3.78□□□□□ -1.8
SSBP1-213ENST00000496622 A8MWP4 228 aa3.78□□□□□ -1.8
SSBP1-213ENST00000496622 FAT2Q9NYQ8 4349 aa3.78□□□□□ -1.8
SSBP1-213ENST00000496622 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.81
SSBP1-213ENST00000496622 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
SSBP1-213ENST00000496622 C8orf17Q9NRJ1 99 aa3.77□□□□□ -1.81
SSBP1-213ENST00000496622 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
SSBP1-213ENST00000496622 Q8N377 158 aa3.77□□□□□ -1.81
SSBP1-213ENST00000496622 A0A1B0GW54 56 aa3.76□□□□□ -1.81
SSBP1-213ENST00000496622 SPRR1AP35321 89 aa3.76□□□□□ -1.81
SSBP1-213ENST00000496622 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
SSBP1-213ENST00000496622 DNAH5Q8TE73 4624 aa3.76□□□□□ -1.81
SSBP1-213ENST00000496622 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
SSBP1-213ENST00000496622 COA5Q86WW8 74 aa3.75□□□□□ -1.81
SSBP1-213ENST00000496622 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
SSBP1-213ENST00000496622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
SSBP1-213ENST00000496622 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
SSBP1-213ENST00000496622 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
SSBP1-213ENST00000496622 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SSBP1-213ENST00000496622 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
SSBP1-213ENST00000496622 ANAPC11Q9NYG5 84 aa3.74□□□□□ -1.81
SSBP1-213ENST00000496622 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
SSBP1-213ENST00000496622 PKD1P98161 4303 aa3.73□□□□□ -1.81
SSBP1-213ENST00000496622 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
SSBP1-213ENST00000496622 H0Y9P7 68 aa3.72□□□□□ -1.81
SSBP1-213ENST00000496622 DHRS4-AS1Q9P1J3 65 aa3.72□□□□□ -1.81
SSBP1-213ENST00000496622 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.81
SSBP1-213ENST00000496622 ALMS1Q8TCU4 4167 aa3.71□□□□□ -1.82
SSBP1-213ENST00000496622 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
SSBP1-213ENST00000496622 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
SSBP1-213ENST00000496622 FAT1Q14517 4588 aa3.7□□□□□ -1.82
SSBP1-213ENST00000496622 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
SSBP1-213ENST00000496622 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
SSBP1-213ENST00000496622 C1orf137Q5JT78 98 aa3.7□□□□□ -1.82
SSBP1-213ENST00000496622 IGLV5-48A0A075B6I7 105 aa3.69□□□□□ -1.82
SSBP1-213ENST00000496622 VPS13BQ7Z7G8 4022 aa3.69□□□□□ -1.82
SSBP1-213ENST00000496622 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
SSBP1-213ENST00000496622 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
SSBP1-213ENST00000496622 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms