RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
BRCA1-222ENST00000493919 C9orf163Q8N9P6 203 aa7.23□□□□□ -1.25
BRCA1-222ENST00000493919 PLA2G2DQ9UNK4 145 aa7.23□□□□□ -1.25
BRCA1-222ENST00000493919 COX6A2Q02221 97 aa7.23□□□□□ -1.25
BRCA1-222ENST00000493919 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
BRCA1-222ENST00000493919 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-222ENST00000493919 K7ERS5 55 aa7.22□□□□□ -1.25
BRCA1-222ENST00000493919 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
BRCA1-222ENST00000493919 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
BRCA1-222ENST00000493919 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
BRCA1-222ENST00000493919 A8MWP4 228 aa7.19□□□□□ -1.26
BRCA1-222ENST00000493919 LINC00483Q53H64 154 aa7.19□□□□□ -1.26
BRCA1-222ENST00000493919 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
BRCA1-222ENST00000493919 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
BRCA1-222ENST00000493919 RYR1P21817 5038 aa7.19□□□□□ -1.26
BRCA1-222ENST00000493919 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
BRCA1-222ENST00000493919 DNAH8Q96JB1 4490 aa7.17□□□□□ -1.26
BRCA1-222ENST00000493919 HSPG2P98160 4391 aa7.17□□□□□ -1.26
BRCA1-222ENST00000493919 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
BRCA1-222ENST00000493919 Q6ZQY7 126 aa7.17□□□□□ -1.26
BRCA1-222ENST00000493919 HERC2O95714 4834 aa7.15□□□□□ -1.26
BRCA1-222ENST00000493919 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-222ENST00000493919 C1orf137Q5JT78 98 aa7.15□□□□□ -1.26
BRCA1-222ENST00000493919 C20orf166-AS1Q96NR2 134 aa7.15□□□□□ -1.26
BRCA1-222ENST00000493919 CAMK2N2Q96S95 79 aa7.15□□□□□ -1.26
BRCA1-222ENST00000493919 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-222ENST00000493919 UQCR11O14957 56 aa7.13□□□□□ -1.27
BRCA1-222ENST00000493919 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
BRCA1-222ENST00000493919 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-222ENST00000493919 FAT1Q14517 4588 aa7.11□□□□□ -1.27
BRCA1-222ENST00000493919 ZNF861PO60384 105 aa7.11□□□□□ -1.27
BRCA1-222ENST00000493919 DMAC1Q96GE9 116 aa7.09□□□□□ -1.27
BRCA1-222ENST00000493919 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
BRCA1-222ENST00000493919 IGLV1-50A0A075B6I6 118 aa7.07□□□□□ -1.28
BRCA1-222ENST00000493919 IGKV2-24A0A0C4DH68 120 aa7.07□□□□□ -1.28
BRCA1-222ENST00000493919 Q6ZSA8 131 aa7.07□□□□□ -1.28
BRCA1-222ENST00000493919 COX17Q14061 63 aa7.06□□□□□ -1.28
BRCA1-222ENST00000493919 PANO1I0J062 215 aa7.05□□□□□ -1.28
BRCA1-222ENST00000493919 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-222ENST00000493919 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
BRCA1-222ENST00000493919 A0A096LNI7 61 aa7.03□□□□□ -1.28
BRCA1-222ENST00000493919 Q8IZM0 81 aa7.03□□□□□ -1.28
BRCA1-222ENST00000493919 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
BRCA1-222ENST00000493919 DSCR10P59022 87 aa7.03□□□□□ -1.28
BRCA1-222ENST00000493919 C6orf48Q9UBA6 75 aa7.03□□□□□ -1.28
BRCA1-222ENST00000493919 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
BRCA1-222ENST00000493919 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
BRCA1-222ENST00000493919 NDUFAF8A1L188 74 aa7.01□□□□□ -1.29
BRCA1-222ENST00000493919 Q8N1X5 172 aa6.99□□□□□ -1.29
BRCA1-222ENST00000493919 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
BRCA1-222ENST00000493919 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
BRCA1-222ENST00000493919 A8MUU9 505 aa6.98□□□□□ -1.29
BRCA1-222ENST00000493919 K7EQZ3 153 aa6.98□□□□□ -1.29
BRCA1-222ENST00000493919 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
BRCA1-222ENST00000493919 Q5VSD8 79 aa6.98□□□□□ -1.29
BRCA1-222ENST00000493919 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
BRCA1-222ENST00000493919 HRES1P13985 223 aa6.97□□□□□ -1.29
BRCA1-222ENST00000493919 VPS13BQ7Z7G8 4022 aa6.97□□□□□ -1.29
BRCA1-222ENST00000493919 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
BRCA1-222ENST00000493919 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
BRCA1-222ENST00000493919 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
BRCA1-222ENST00000493919 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
BRCA1-222ENST00000493919 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
BRCA1-222ENST00000493919 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
BRCA1-222ENST00000493919 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
BRCA1-222ENST00000493919 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-222ENST00000493919 A0A1B0GU69 56 aa6.93□□□□□ -1.3
BRCA1-222ENST00000493919 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
BRCA1-222ENST00000493919 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
BRCA1-222ENST00000493919 Q5W150 140 aa6.92□□□□□ -1.3
BRCA1-222ENST00000493919 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
BRCA1-222ENST00000493919 Q8NBF4 154 aa6.9□□□□□ -1.3
BRCA1-222ENST00000493919 LINC00472Q9H8W2 130 aa6.89□□□□□ -1.31
BRCA1-222ENST00000493919 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
BRCA1-222ENST00000493919 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
BRCA1-222ENST00000493919 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
BRCA1-222ENST00000493919 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
BRCA1-222ENST00000493919 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
BRCA1-222ENST00000493919 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
BRCA1-222ENST00000493919 WFDC13Q8IUB5 93 aa6.85□□□□□ -1.31
BRCA1-222ENST00000493919 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
BRCA1-222ENST00000493919 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-222ENST00000493919 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
BRCA1-222ENST00000493919 A0A1B0GVX0 72 aa6.84□□□□□ -1.32
BRCA1-222ENST00000493919 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.32
BRCA1-222ENST00000493919 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
BRCA1-222ENST00000493919 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
BRCA1-222ENST00000493919 PSORS1C2Q9UIG4 136 aa6.82□□□□□ -1.32
BRCA1-222ENST00000493919 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-222ENST00000493919 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
BRCA1-222ENST00000493919 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
BRCA1-222ENST00000493919 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
BRCA1-222ENST00000493919 ACYP2P14621 99 aa6.8□□□□□ -1.32
BRCA1-222ENST00000493919 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
BRCA1-222ENST00000493919 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
BRCA1-222ENST00000493919 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
BRCA1-222ENST00000493919 SPINK6Q6UWN8 80 aa6.72□□□□□ -1.33
BRCA1-222ENST00000493919 Q8N377 158 aa6.72□□□□□ -1.33
BRCA1-222ENST00000493919 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-222ENST00000493919 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms