RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 MT1HP80294 61 aa-0.55□□□□□ -2.5
SCAF11-207ENST00000484275 ABCC10Q5T3U5 1492 aa-0.55□□□□□ -2.5
SCAF11-207ENST00000484275 WIZO95785 1651 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 A0A1B0GUT8 65 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 HMGN2P05204 90 aaKnown RBP-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 SMIM11AP58511 58 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 PLGLAQ15195 96 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 MT1LQ93083 61 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 ZNF831Q5JPB2 1677 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 CFAP43Q8NDM7 1665 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 DEPDC5O75140 1603 aa-0.56□□□□□ -2.5
SCAF11-207ENST00000484275 ABCC3O15438 1527 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 MAGI3Q5TCQ9 1506 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 ITSN1Q15811 1721 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 PEA15Q15121 130 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 KRTAP19-5Q3LI72 72 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 PLCH1Q4KWH8 1693 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 KIF14Q15058 1648 aa-0.57□□□□□ -2.5
SCAF11-207ENST00000484275 M0R143 59 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 NDUFA3O95167 84 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 CYB5AP00167 134 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 GYPAP02724 150 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 NCMAPQ5T1S8 102 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 PIK3C2BO00750 1634 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 ANKRD50Q9ULJ7 1429 aa-0.58□□□□□ -2.5
SCAF11-207ENST00000484275 NEXMIFQ5QGS0 1516 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 C9orf92A6NGG3 77 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 IQCF6A8MYZ5 107 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 H3BNG1 76 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 KRTAP8-1Q8IUC2 63 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 TTC37Q6PGP7 1564 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 THOC2Q8NI27 1593 aaKnown RBP-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 DIP2BQ9P265 1576 aa-0.59□□□□□ -2.5
SCAF11-207ENST00000484275 SMARCA2P51531 1590 aa-0.6□□□□□ -2.51
SCAF11-207ENST00000484275 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
SCAF11-207ENST00000484275 CCDC88BA6NC98 1476 aa-0.61□□□□□ -2.51
SCAF11-207ENST00000484275 S100A8P05109 93 aa-0.61□□□□□ -2.51
SCAF11-207ENST00000484275 MAP3K1Q13233 1512 aa-0.61□□□□□ -2.51
SCAF11-207ENST00000484275 URB2Q14146 1524 aaKnown RBP-0.61□□□□□ -2.51
SCAF11-207ENST00000484275 ANKRD36CQ5JPF3 1778 aa-0.61□□□□□ -2.51
SCAF11-207ENST00000484275 ASXL1Q8IXJ9 1541 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 TRAV21A0A0B4J279 112 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 C3orf79P0CE67 100 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 WFDC9Q8NEX5 89 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 C20orf78Q9BR46 151 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 PRO3102Q9H379 93 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 CCNB3Q8WWL7 1395 aa-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 ZC3H13Q5T200 1668 aaKnown RBP-0.62□□□□□ -2.51
SCAF11-207ENST00000484275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 TJP1Q07157 1748 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 MYMXA0A1B0GTQ4 84 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 NDUFB1O75438 58 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 PKIAP61925 76 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 SNHG12Q9BXW3 62 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 PLIN4Q96Q06 1357 aa-0.63□□□□□ -2.51
SCAF11-207ENST00000484275 RICTORQ6R327 1708 aa-0.64□□□□□ -2.51
SCAF11-207ENST00000484275 LCE6AA0A183 80 aa-0.64□□□□□ -2.51
SCAF11-207ENST00000484275 NCOA2Q15596 1464 aa-0.65□□□□□ -2.51
SCAF11-207ENST00000484275 LINC00158P58513 81 aa-0.65□□□□□ -2.51
SCAF11-207ENST00000484275 RABAC1Q9UI14 185 aa-0.65□□□□□ -2.51
SCAF11-207ENST00000484275 PARP4Q9UKK3 1724 aaKnown RBP-0.66□□□□□ -2.51
SCAF11-207ENST00000484275 RNF17Q9BXT8 1623 aaKnown RBP-0.66□□□□□ -2.51
SCAF11-207ENST00000484275 H0YAA0 97 aa-0.66□□□□□ -2.52
SCAF11-207ENST00000484275 SNRPFP62306 86 aaKnown RBP-0.66□□□□□ -2.52
SCAF11-207ENST00000484275 CEBPZOSA8MTT3 80 aa-0.67□□□□□ -2.52
SCAF11-207ENST00000484275 PRLHP81277 87 aa-0.67□□□□□ -2.52
SCAF11-207ENST00000484275 PYY3Q5JQD4 70 aa-0.67□□□□□ -2.52
SCAF11-207ENST00000484275 LINC00643Q86TS7 51 aa-0.67□□□□□ -2.52
SCAF11-207ENST00000484275 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.67□□□□□ -2.52
SCAF11-207ENST00000484275 NHSQ6T4R5 1651 aa-0.68□□□□□ -2.52
SCAF11-207ENST00000484275 ITSN2Q9NZM3 1697 aa-0.68□□□□□ -2.52
SCAF11-207ENST00000484275 LYNX1G3V0Z9 82 aa-0.68□□□□□ -2.52
SCAF11-207ENST00000484275 K7EP34 96 aa-0.68□□□□□ -2.52
SCAF11-207ENST00000484275 NRAPQ86VF7 1730 aa-0.68□□□□□ -2.52
SCAF11-207ENST00000484275 ACYP1P07311 99 aa-0.69□□□□□ -2.52
SCAF11-207ENST00000484275 S100A16Q96FQ6 103 aaKnown RBP-0.69□□□□□ -2.52
SCAF11-207ENST00000484275 Q9H521 79 aa-0.69□□□□□ -2.52
SCAF11-207ENST00000484275 V9GYS6 101 aa-0.69□□□□□ -2.52
SCAF11-207ENST00000484275 KIAA0586Q9BVV6 1533 aa-0.69□□□□□ -2.52
SCAF11-207ENST00000484275 CDC42BPGQ6DT37 1551 aa-0.7□□□□□ -2.52
SCAF11-207ENST00000484275 PVALEFA0A1B0GWK0 134 aa-0.7□□□□□ -2.52
SCAF11-207ENST00000484275 IFI27P40305 119 aaPredicted RBP-0.7□□□□□ -2.52
SCAF11-207ENST00000484275 DEFA5Q01523 94 aa-0.7□□□□□ -2.52
SCAF11-207ENST00000484275 S4R3F8 94 aa-0.7□□□□□ -2.52
SCAF11-207ENST00000484275 TOGARAM1Q9Y4F4 1720 aa-0.71□□□□□ -2.52
SCAF11-207ENST00000484275 UMAD1C9J7I0 102 aa-0.71□□□□□ -2.52
SCAF11-207ENST00000484275 IFI6P09912 130 aa-0.71□□□□□ -2.52
SCAF11-207ENST00000484275 KIF1AQ12756 1690 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 LRRIQ1Q96JM4 1722 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 KDM5DQ9BY66 1539 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 NDUFA4O00483 81 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 IAPPP10997 89 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 ATP5EP2Q5VTU8 51 aa-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 INO80Q9ULG1 1556 aaPredicted RBP-0.72□□□□□ -2.52
SCAF11-207ENST00000484275 UACAQ9BZF9 1416 aa-0.72□□□□□ -2.53
SCAF11-207ENST00000484275 KANTRA0A1W2PQU2 76 aa-0.73□□□□□ -2.53
SCAF11-207ENST00000484275 DEFB130BP0DP73 79 aa-0.73□□□□□ -2.53
SCAF11-207ENST00000484275 DEFB130AP0DP74 79 aa-0.73□□□□□ -2.53
SCAF11-207ENST00000484275 HMGA1P17096 107 aaKnown RBP-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 1249.1 ms