RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ASB16-AS1Q495Z4 193 aa1.34□□□□□ -2.19
PTCD3-211ENST00000476215 MEIG1Q5JSS6 88 aa1.34□□□□□ -2.19
PTCD3-211ENST00000476215 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.2
PTCD3-211ENST00000476215 NCR3O14931 201 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 DPM2O94777 84 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 LEPROTL1O95214 131 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 TRGC2P03986 189 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 FABP4P15090 132 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 PLNP26678 52 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 S100A12P80511 92 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 NDUFA5Q16718 116 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 HSPB8Q9UJY1 196 aa1.33□□□□□ -2.2
PTCD3-211ENST00000476215 NDUFC2O95298 119 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 IGKCP01834 107 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 RPS29P62273 56 aaKnown RBP1.32□□□□□ -2.2
PTCD3-211ENST00000476215 S100A7L2Q5SY68 101 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 SOSTDC1Q6X4U4 206 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 Q6ZRX8 168 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
PTCD3-211ENST00000476215 TRAV23DV6A0A075B6W5 121 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 SYS1-DBNDD2H3BUS1 97 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 SPRR1BP22528 89 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 NPC2P61916 151 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 OR13C6PQ8NH95 151 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 LINC00308Q8TCZ7 52 aa1.31□□□□□ -2.2
PTCD3-211ENST00000476215 TRBV7-6A0A0J9YX20 115 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 TEX49A0A1B0GTD5 131 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BKO60814 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 TIMM17BO60830 172 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BJP06899 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BOP23527 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BBP33778 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BDP58876 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BCP62807 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST2H2BEQ16778 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 KRTAP19-2Q3LHN2 52 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.3□□□□□ -2.2
PTCD3-211ENST00000476215 C9orf153Q5TBE3 101 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 LINC01545Q5VT33 79 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HRCT1Q6UXD1 115 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BHQ93079 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BNQ99877 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 HIST1H2BMQ99879 126 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 SPANXDQ9BXN6 97 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 LAMTOR3Q9UHA4 124 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
PTCD3-211ENST00000476215 C9orf92A6NGG3 77 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 ZNF815PA8K554 130 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 C3orf79P0CE67 100 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 COX7BP24311 80 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 AKR1D1P51857 326 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 ELOF1P60002 83 aaKnown RBP1.29□□□□□ -2.2
PTCD3-211ENST00000476215 Q5XG85 94 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 PRO1933Q9H354 126 aa1.29□□□□□ -2.2
PTCD3-211ENST00000476215 IGLV5-48A0A075B6I7 105 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 IFITM1P13164 125 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 FXYD2P54710 66 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 KRTDAPP60985 99 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 MT1HP80294 61 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 COPS9Q8WXC6 57 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 LIMD2Q9BT23 127 aa1.28□□□□□ -2.2
PTCD3-211ENST00000476215 TRAV13-2A0A0B4J235 113 aa1.27□□□□□ -2.21
PTCD3-211ENST00000476215 TCL1BO95988 128 aa1.27□□□□□ -2.21
PTCD3-211ENST00000476215 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
PTCD3-211ENST00000476215 USH2AO75445 5202 aa1.27□□□□□ -2.21
PTCD3-211ENST00000476215 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
PTCD3-211ENST00000476215 C20orf202A1L168 122 aa1.26□□□□□ -2.21
PTCD3-211ENST00000476215 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
PTCD3-211ENST00000476215 OCIAD2Q56VL3 154 aa1.26□□□□□ -2.21
PTCD3-211ENST00000476215 LINC00575Q6W349 94 aa1.26□□□□□ -2.21
PTCD3-211ENST00000476215 ATOH7Q8N100 152 aa1.26□□□□□ -2.21
PTCD3-211ENST00000476215 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
PTCD3-211ENST00000476215 hADV29S1A0JD25 119 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 M0R2T5 61 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 Q6JHZ5 121 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 Q6ZQY7 126 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 SNHG12Q9BXW3 62 aa1.25□□□□□ -2.21
PTCD3-211ENST00000476215 TRBV7-7A0A0K0K1E9 115 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 F8WEM9 126 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
PTCD3-211ENST00000476215 COX6B2Q6YFQ2 88 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 HIST3H2BBQ8N257 126 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 OBSCN-AS1Q96MR7 158 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 Q96NJ1 140 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 HIST1H2BLQ99880 126 aa1.24□□□□□ -2.21
PTCD3-211ENST00000476215 H0YGX0 51 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 H3BUT2 72 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 DLEU1O43261 78 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 SNCGO76070 127 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 COX8AP10176 69 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 PMAIP1Q13794 54 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 Q6Q795 121 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 PPDPFLQ8WWR9 84 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 CLEC2BQ92478 149 aa1.23□□□□□ -2.21
PTCD3-211ENST00000476215 TEN1Q86WV5 123 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms