RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 H3BQ85 93 aa1.78□□□□□ -2.12
XRN1-209ENST00000472625 KRTDAPP60985 99 aa1.78□□□□□ -2.12
XRN1-209ENST00000472625 Q6ZVQ6 151 aa1.78□□□□□ -2.12
XRN1-209ENST00000472625 MUSTN1Q8IVN3 82 aa1.78□□□□□ -2.12
XRN1-209ENST00000472625 SIGMAR1Q99720 223 aa1.78□□□□□ -2.12
XRN1-209ENST00000472625 A0A1B0GX51 115 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BKO60814 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BJP06899 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 C3orf79P0CE67 100 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BOP23527 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BBP33778 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BDP58876 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BCP62807 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST2H2BEQ16778 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 COA6Q5JTJ3 125 aaKnown RBP1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BHQ93079 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BNQ99877 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H2BMQ99879 126 aa1.77□□□□□ -2.13
XRN1-209ENST00000472625 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
XRN1-209ENST00000472625 A0A087WSZ3 146 aa1.76□□□□□ -2.13
XRN1-209ENST00000472625 COLCA2A8K830 154 aa1.76□□□□□ -2.13
XRN1-209ENST00000472625 H0YGX0 51 aa1.76□□□□□ -2.13
XRN1-209ENST00000472625 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
XRN1-209ENST00000472625 PRO0461Q9UI25 63 aa1.76□□□□□ -2.13
XRN1-209ENST00000472625 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 H3BMG7 143 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 H3BUT2 72 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 DNAL4O96015 105 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 S100A2P29034 98 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 LINC00313P59037 77 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 RAB37Q96AX2 223 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 HIST1H4GQ99525 98 aa1.75□□□□□ -2.13
XRN1-209ENST00000472625 TRBV7-4A0A0J9YYF1 115 aa1.74□□□□□ -2.13
XRN1-209ENST00000472625 A8MWP4 228 aa1.74□□□□□ -2.13
XRN1-209ENST00000472625 C8orf87E5RJ46 101 aa1.74□□□□□ -2.13
XRN1-209ENST00000472625 KRTAP10-10P60014 251 aa1.74□□□□□ -2.13
XRN1-209ENST00000472625 DSCR8Q96T75 97 aa1.74□□□□□ -2.13
XRN1-209ENST00000472625 A0A0B4J2C4 111 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 J3KT08 172 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 TRACP01848 142 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 MT2AP02795 61 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 IGKV4-1P06312 121 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 FABP2P12104 132 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 ATOH7Q8N100 152 aa1.73□□□□□ -2.13
XRN1-209ENST00000472625 TMEM256-PLSCR3K7ERE1 68 aa1.72□□□□□ -2.13
XRN1-209ENST00000472625 DLEU1O43261 78 aa1.72□□□□□ -2.13
XRN1-209ENST00000472625 COX6CP09669 75 aa1.72□□□□□ -2.13
XRN1-209ENST00000472625 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
XRN1-209ENST00000472625 ORMDL1Q9P0S3 153 aa1.72□□□□□ -2.13
XRN1-209ENST00000472625 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 IGHV6-1A0A0B4J1U7 121 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 NDUFB1O75438 58 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 MT1FP04733 61 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 S100A6P06703 90 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 COX8AP10176 69 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 HRES1P13985 223 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 LYRM7Q5U5X0 104 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 HIGD1BQ9P298 99 aa1.71□□□□□ -2.14
XRN1-209ENST00000472625 A0A1B0GVX0 72 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 A0A1B0GW54 56 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 CCKP06307 115 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 S100A1P23297 94 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
XRN1-209ENST00000472625 HIST1H2BLQ99880 126 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 PRO1854Q9UHT4 67 aa1.7□□□□□ -2.14
XRN1-209ENST00000472625 A0A1W2PNM2 257 aa1.69□□□□□ -2.14
XRN1-209ENST00000472625 SPINK7P58062 85 aa1.69□□□□□ -2.14
XRN1-209ENST00000472625 WFDC13Q8IUB5 93 aa1.69□□□□□ -2.14
XRN1-209ENST00000472625 HIST3H2BBQ8N257 126 aa1.69□□□□□ -2.14
XRN1-209ENST00000472625 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
XRN1-209ENST00000472625 NEBP20929 6669 aa1.68□□□□□ -2.14
XRN1-209ENST00000472625 PSMB2P49721 201 aa1.68□□□□□ -2.14
XRN1-209ENST00000472625 RBM3P98179 157 aaKnown RBP1.68□□□□□ -2.14
XRN1-209ENST00000472625 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
XRN1-209ENST00000472625 VPS25Q9BRG1 176 aa1.68□□□□□ -2.14
XRN1-209ENST00000472625 VAMP8Q9BV40 100 aa1.68□□□□□ -2.14
XRN1-209ENST00000472625 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 C9JAW5 83 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 PDE6GP18545 87 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 CEND1Q8N111 149 aa1.67□□□□□ -2.14
XRN1-209ENST00000472625 IGKV3D-7A0A0C4DH55 119 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 A0A1B0GV72 72 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 JMJD7-PLA2G4BH0Y9G9 81 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 HSD52Q0P140 79 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 DEFB116Q30KQ4 102 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 SPATA45Q537H7 98 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
XRN1-209ENST00000472625 H1FX-AS1Q4G0G2 97 aa1.65□□□□□ -2.15
XRN1-209ENST00000472625 Q6ZQT0 140 aa1.65□□□□□ -2.15
XRN1-209ENST00000472625 C2orf91Q6ZV80 131 aa1.65□□□□□ -2.15
XRN1-209ENST00000472625 C14orf144Q96I85 54 aa1.65□□□□□ -2.15
XRN1-209ENST00000472625 C8orf17Q9NRJ1 99 aa1.65□□□□□ -2.15
XRN1-209ENST00000472625 SCGB1C2P0DMR2 95 aa1.64□□□□□ -2.15
XRN1-209ENST00000472625 FXYD2P54710 66 aa1.64□□□□□ -2.15
XRN1-209ENST00000472625 CXCL6P80162 114 aa1.64□□□□□ -2.15
XRN1-209ENST00000472625 C7orf65Q6ZTY9 151 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms