RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 A0A1B0GW54 56 aa10.22□□□□□ -0.77
HOXB3-205ENST00000470495 ANAPC11Q9NYG5 84 aa10.22□□□□□ -0.77
HOXB3-205ENST00000470495 KRTAP4-16G5E9R7 235 aaPredicted RBP10.22□□□□□ -0.77
HOXB3-205ENST00000470495 TP53AIP1Q9HCN2 124 aa10.22□□□□□ -0.77
HOXB3-205ENST00000470495 PANO1I0J062 215 aa10.2□□□□□ -0.78
HOXB3-205ENST00000470495 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
HOXB3-205ENST00000470495 PSORS1C2Q9UIG4 136 aa10.18□□□□□ -0.78
HOXB3-205ENST00000470495 WWC2-AS2Q96NR7 200 aa10.17□□□□□ -0.78
HOXB3-205ENST00000470495 HRES1P13985 223 aa10.17□□□□□ -0.78
HOXB3-205ENST00000470495 TNP2Q05952 138 aa10.15□□□□□ -0.78
HOXB3-205ENST00000470495 ASB16-AS1Q495Z4 193 aa10.14□□□□□ -0.79
HOXB3-205ENST00000470495 KRTAP11-1Q8IUC1 163 aa10.14□□□□□ -0.79
HOXB3-205ENST00000470495 SPACA4Q8TDM5 124 aa10.13□□□□□ -0.79
HOXB3-205ENST00000470495 SPRR4Q96PI1 79 aa10.12□□□□□ -0.79
HOXB3-205ENST00000470495 IGKV2D-30A0A075B6S6 120 aa10.09□□□□□ -0.79
HOXB3-205ENST00000470495 IGKV2-30P06310 120 aa10.09□□□□□ -0.79
HOXB3-205ENST00000470495 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
HOXB3-205ENST00000470495 ZNF861PO60384 105 aa10.09□□□□□ -0.79
HOXB3-205ENST00000470495 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
HOXB3-205ENST00000470495 KRTAP25-1Q3LHN0 102 aa10.06□□□□□ -0.8
HOXB3-205ENST00000470495 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
HOXB3-205ENST00000470495 TGP01266 2768 aa10.02□□□□□ -0.81
HOXB3-205ENST00000470495 SEC61BP60468 96 aaKnown RBP10.02□□□□□ -0.81
HOXB3-205ENST00000470495 IGLV7-43P04211 117 aa10□□□□□ -0.81
HOXB3-205ENST00000470495 C20orf166-AS1Q96NR2 134 aa9.98□□□□□ -0.81
HOXB3-205ENST00000470495 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.81
HOXB3-205ENST00000470495 SPRR1BP22528 89 aa9.95□□□□□ -0.82
HOXB3-205ENST00000470495 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
HOXB3-205ENST00000470495 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
HOXB3-205ENST00000470495 J3QL48 77 aa9.91□□□□□ -0.82
HOXB3-205ENST00000470495 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
HOXB3-205ENST00000470495 A8MUU9 505 aa9.9□□□□□ -0.82
HOXB3-205ENST00000470495 LCE6AA0A183 80 aa9.87□□□□□ -0.83
HOXB3-205ENST00000470495 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
HOXB3-205ENST00000470495 HUWE1Q7Z6Z7 4374 aaKnown RBP9.87□□□□□ -0.83
HOXB3-205ENST00000470495 ANK2Q01484 3957 aa9.87□□□□□ -0.83
HOXB3-205ENST00000470495 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
HOXB3-205ENST00000470495 LINC00472Q9H8W2 130 aa9.86□□□□□ -0.83
HOXB3-205ENST00000470495 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
HOXB3-205ENST00000470495 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
HOXB3-205ENST00000470495 CSMD3Q7Z407 3707 aa9.82□□□□□ -0.84
HOXB3-205ENST00000470495 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
HOXB3-205ENST00000470495 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
HOXB3-205ENST00000470495 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
HOXB3-205ENST00000470495 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
HOXB3-205ENST00000470495 A0A0D9SG42 100 aa9.78□□□□□ -0.84
HOXB3-205ENST00000470495 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.85
HOXB3-205ENST00000470495 A0A1B0GU33 70 aa9.71□□□□□ -0.85
HOXB3-205ENST00000470495 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
HOXB3-205ENST00000470495 FBN3Q75N90 2809 aa9.68□□□□□ -0.86
HOXB3-205ENST00000470495 MEGF8Q7Z7M0 2845 aa9.67□□□□□ -0.86
HOXB3-205ENST00000470495 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
HOXB3-205ENST00000470495 A0A087X002 238 aa9.66□□□□□ -0.86
HOXB3-205ENST00000470495 CMYA5Q8N3K9 4069 aa9.64□□□□□ -0.87
HOXB3-205ENST00000470495 Q8N1X5 172 aa9.64□□□□□ -0.87
HOXB3-205ENST00000470495 Q96NJ1 140 aa9.63□□□□□ -0.87
HOXB3-205ENST00000470495 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
HOXB3-205ENST00000470495 DNAH9Q9NYC9 4486 aa9.62□□□□□ -0.87
HOXB3-205ENST00000470495 LINC00304Q8N9R0 145 aa9.61□□□□□ -0.87
HOXB3-205ENST00000470495 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
HOXB3-205ENST00000470495 P0C880 135 aa9.58□□□□□ -0.88
HOXB3-205ENST00000470495 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
HOXB3-205ENST00000470495 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
HOXB3-205ENST00000470495 LYSTQ99698 3801 aa9.51□□□□□ -0.89
HOXB3-205ENST00000470495 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
HOXB3-205ENST00000470495 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
HOXB3-205ENST00000470495 KRTAP21-3Q3LHN1 58 aa9.46□□□□□ -0.89
HOXB3-205ENST00000470495 Q6ZSA8 131 aa9.44□□□□□ -0.9
HOXB3-205ENST00000470495 Q5W150 140 aa9.42□□□□□ -0.9
HOXB3-205ENST00000470495 PRKDCP78527 4128 aaKnown RBP9.37□□□□□ -0.91
HOXB3-205ENST00000470495 CAMK2N1Q7Z7J9 78 aa9.36□□□□□ -0.91
HOXB3-205ENST00000470495 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
HOXB3-205ENST00000470495 C10orf95Q9H7T3 257 aa9.36□□□□□ -0.91
HOXB3-205ENST00000470495 DNHD1Q96M86 4753 aa9.35□□□□□ -0.91
HOXB3-205ENST00000470495 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
HOXB3-205ENST00000470495 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
HOXB3-205ENST00000470495 DNAH7Q8WXX0 4024 aa9.29□□□□□ -0.92
HOXB3-205ENST00000470495 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
HOXB3-205ENST00000470495 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
HOXB3-205ENST00000470495 VPS13DQ5THJ4 4388 aa9.21□□□□□ -0.94
HOXB3-205ENST00000470495 Q5VSD8 79 aa9.2□□□□□ -0.94
HOXB3-205ENST00000470495 KMT2AQ03164 3969 aa9.2□□□□□ -0.94
HOXB3-205ENST00000470495 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
HOXB3-205ENST00000470495 H0YAA0 97 aa9.08□□□□□ -0.96
HOXB3-205ENST00000470495 DYNC2H1Q8NCM8 4307 aaKnown RBP9.03□□□□□ -0.96
HOXB3-205ENST00000470495 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
HOXB3-205ENST00000470495 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
HOXB3-205ENST00000470495 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
HOXB3-205ENST00000470495 DNAH2Q9P225 4427 aa9□□□□□ -0.97
HOXB3-205ENST00000470495 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
HOXB3-205ENST00000470495 FRAS1Q86XX4 4008 aa8.95□□□□□ -0.98
HOXB3-205ENST00000470495 DNAH8Q96JB1 4490 aa8.94□□□□□ -0.98
HOXB3-205ENST00000470495 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
HOXB3-205ENST00000470495 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
HOXB3-205ENST00000470495 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
HOXB3-205ENST00000470495 LRP1BQ9NZR2 4599 aa8.88□□□□□ -0.99
HOXB3-205ENST00000470495 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
HOXB3-205ENST00000470495 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
HOXB3-205ENST00000470495 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
HOXB3-205ENST00000470495 ALMS1Q8TCU4 4167 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms