RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
NUP50-214ENST00000469163 A0A087X002 238 aa6.12□□□□□ -1.43
NUP50-214ENST00000469163 A0A087WTM6 91 aa6.12□□□□□ -1.43
NUP50-214ENST00000469163 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
NUP50-214ENST00000469163 KRTAP29-1A8MX34 341 aaPredicted RBP6.11□□□□□ -1.43
NUP50-214ENST00000469163 UQCR11O14957 56 aa6.11□□□□□ -1.43
NUP50-214ENST00000469163 P0C880 135 aa6.11□□□□□ -1.43
NUP50-214ENST00000469163 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
NUP50-214ENST00000469163 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
NUP50-214ENST00000469163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
NUP50-214ENST00000469163 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
NUP50-214ENST00000469163 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
NUP50-214ENST00000469163 A8MWP4 228 aa6.09□□□□□ -1.43
NUP50-214ENST00000469163 KRTAP10-2P60368 255 aa6.09□□□□□ -1.43
NUP50-214ENST00000469163 KRTAP26-1Q6PEX3 210 aa6.08□□□□□ -1.44
NUP50-214ENST00000469163 PLECQ15149 4684 aaKnown RBP6.08□□□□□ -1.44
NUP50-214ENST00000469163 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
NUP50-214ENST00000469163 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
NUP50-214ENST00000469163 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
NUP50-214ENST00000469163 ZNF861PO60384 105 aa6.06□□□□□ -1.44
NUP50-214ENST00000469163 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
NUP50-214ENST00000469163 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
NUP50-214ENST00000469163 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
NUP50-214ENST00000469163 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
NUP50-214ENST00000469163 KMT2AQ03164 3969 aa6.04□□□□□ -1.44
NUP50-214ENST00000469163 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
NUP50-214ENST00000469163 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
NUP50-214ENST00000469163 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
NUP50-214ENST00000469163 A8MUU9 505 aa6□□□□□ -1.45
NUP50-214ENST00000469163 LINC00483Q53H64 154 aa6□□□□□ -1.45
NUP50-214ENST00000469163 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
NUP50-214ENST00000469163 Q6ZRX8 168 aa6□□□□□ -1.45
NUP50-214ENST00000469163 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
NUP50-214ENST00000469163 ACYP2P14621 99 aa5.99□□□□□ -1.45
NUP50-214ENST00000469163 CIRBP-AS1Q8TBR5 109 aa5.99□□□□□ -1.45
NUP50-214ENST00000469163 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.45
NUP50-214ENST00000469163 KRTAP10-1P60331 282 aa5.96□□□□□ -1.46
NUP50-214ENST00000469163 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
NUP50-214ENST00000469163 MMP24-AS1A0A0U1RRL7 71 aa5.95□□□□□ -1.46
NUP50-214ENST00000469163 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
NUP50-214ENST00000469163 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
NUP50-214ENST00000469163 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
NUP50-214ENST00000469163 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
NUP50-214ENST00000469163 KRTAP21-3Q3LHN1 58 aa5.91□□□□□ -1.46
NUP50-214ENST00000469163 DNAH2Q9P225 4427 aa5.9□□□□□ -1.46
NUP50-214ENST00000469163 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
NUP50-214ENST00000469163 HYDINQ4G0P3 5121 aa5.9□□□□□ -1.47
NUP50-214ENST00000469163 VPS13DQ5THJ4 4388 aa5.9□□□□□ -1.47
NUP50-214ENST00000469163 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
NUP50-214ENST00000469163 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
NUP50-214ENST00000469163 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
NUP50-214ENST00000469163 SPACA4Q8TDM5 124 aa5.87□□□□□ -1.47
NUP50-214ENST00000469163 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
NUP50-214ENST00000469163 FRAS1Q86XX4 4008 aa5.85□□□□□ -1.47
NUP50-214ENST00000469163 LINC00304Q8N9R0 145 aa5.85□□□□□ -1.47
NUP50-214ENST00000469163 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
NUP50-214ENST00000469163 CDK2AP2O75956 126 aa5.83□□□□□ -1.48
NUP50-214ENST00000469163 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
NUP50-214ENST00000469163 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
NUP50-214ENST00000469163 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
NUP50-214ENST00000469163 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
NUP50-214ENST00000469163 K7ERS5 55 aa5.8□□□□□ -1.48
NUP50-214ENST00000469163 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
NUP50-214ENST00000469163 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
NUP50-214ENST00000469163 HECTD4Q9Y4D8 3996 aa5.79□□□□□ -1.48
NUP50-214ENST00000469163 SPRR1AP35321 89 aa5.78□□□□□ -1.48
NUP50-214ENST00000469163 SPINK1P00995 79 aa5.78□□□□□ -1.48
NUP50-214ENST00000469163 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
NUP50-214ENST00000469163 FAM229AH3BQW9 127 aa5.75□□□□□ -1.49
NUP50-214ENST00000469163 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
NUP50-214ENST00000469163 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
NUP50-214ENST00000469163 FAT1Q14517 4588 aa5.74□□□□□ -1.49
NUP50-214ENST00000469163 Q5W150 140 aa5.74□□□□□ -1.49
NUP50-214ENST00000469163 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
NUP50-214ENST00000469163 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
NUP50-214ENST00000469163 A0A1B0GVX0 72 aa5.71□□□□□ -1.5
NUP50-214ENST00000469163 DNAH17Q9UFH2 4485 aa5.7□□□□□ -1.5
NUP50-214ENST00000469163 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
NUP50-214ENST00000469163 C9orf92A6NGG3 77 aa5.7□□□□□ -1.5
NUP50-214ENST00000469163 RYR3Q15413 4870 aa5.69□□□□□ -1.5
NUP50-214ENST00000469163 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
NUP50-214ENST00000469163 PKD1P98161 4303 aa5.69□□□□□ -1.5
NUP50-214ENST00000469163 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
NUP50-214ENST00000469163 Q5VSD8 79 aa5.68□□□□□ -1.5
NUP50-214ENST00000469163 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
NUP50-214ENST00000469163 H0YAA0 97 aa5.67□□□□□ -1.5
NUP50-214ENST00000469163 Q96NJ1 140 aa5.67□□□□□ -1.5
NUP50-214ENST00000469163 RYR2Q92736 4967 aa5.67□□□□□ -1.5
NUP50-214ENST00000469163 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.51
NUP50-214ENST00000469163 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
NUP50-214ENST00000469163 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
NUP50-214ENST00000469163 Q6ZSA8 131 aa5.62□□□□□ -1.51
NUP50-214ENST00000469163 J3QL48 77 aa5.59□□□□□ -1.51
NUP50-214ENST00000469163 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
NUP50-214ENST00000469163 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
NUP50-214ENST00000469163 A0A1B0GU33 70 aa5.58□□□□□ -1.52
NUP50-214ENST00000469163 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
NUP50-214ENST00000469163 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
NUP50-214ENST00000469163 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
NUP50-214ENST00000469163 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms