RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ANKRD36CQ5JPF3 1778 aa-3.28□□□□□ -2.93
SMC4-207ENST00000467263 NCOA2Q15596 1464 aa-3.28□□□□□ -2.93
SMC4-207ENST00000467263 CDC42BPAQ5VT25 1732 aa-3.29□□□□□ -2.94
SMC4-207ENST00000467263 ANKRD26Q9UPS8 1709 aa-3.29□□□□□ -2.94
SMC4-207ENST00000467263 DDX60LQ5H9U9 1706 aaKnown RBP-3.3□□□□□ -2.94
SMC4-207ENST00000467263 KRTAP8-1Q8IUC2 63 aa-3.31□□□□□ -2.94
SMC4-207ENST00000467263 CEP162Q5TB80 1403 aa-3.31□□□□□ -2.94
SMC4-207ENST00000467263 TMEM131LA2VDJ0 1609 aa-3.31□□□□□ -2.94
SMC4-207ENST00000467263 M0R143 59 aa-3.32□□□□□ -2.94
SMC4-207ENST00000467263 ARFGEF2Q9Y6D5 1785 aa-3.33□□□□□ -2.94
SMC4-207ENST00000467263 DIP2BQ9P265 1576 aa-3.33□□□□□ -2.94
SMC4-207ENST00000467263 CEBPZOSA8MTT3 80 aa-3.33□□□□□ -2.94
SMC4-207ENST00000467263 IFI27P40305 119 aaPredicted RBP-3.34□□□□□ -2.94
SMC4-207ENST00000467263 ABCC10Q5T3U5 1492 aa-3.36□□□□□ -2.95
SMC4-207ENST00000467263 URB2Q14146 1524 aaKnown RBP-3.38□□□□□ -2.95
SMC4-207ENST00000467263 RABAC1Q9UI14 185 aa-3.38□□□□□ -2.95
SMC4-207ENST00000467263 AKAP12Q02952 1782 aa-3.38□□□□□ -2.95
SMC4-207ENST00000467263 MGAQ8IWI9 3026 aa-3.38□□□□□ -2.95
SMC4-207ENST00000467263 ZFHX4Q86UP3 3567 aa-3.39□□□□□ -2.95
SMC4-207ENST00000467263 UMAD1C9J7I0 102 aa-3.39□□□□□ -2.95
SMC4-207ENST00000467263 TNP1P09430 55 aa-3.39□□□□□ -2.95
SMC4-207ENST00000467263 CSMD2Q7Z408 3487 aa-3.39□□□□□ -2.95
SMC4-207ENST00000467263 NDUFA4O00483 81 aa-3.4□□□□□ -2.95
SMC4-207ENST00000467263 SNHG12Q9BXW3 62 aa-3.41□□□□□ -2.96
SMC4-207ENST00000467263 SNRPFP62306 86 aaKnown RBP-3.42□□□□□ -2.96
SMC4-207ENST00000467263 LINC00643Q86TS7 51 aa-3.42□□□□□ -2.96
SMC4-207ENST00000467263 PLCH1Q4KWH8 1693 aa-3.43□□□□□ -2.96
SMC4-207ENST00000467263 ITSN1Q15811 1721 aa-3.44□□□□□ -2.96
SMC4-207ENST00000467263 PARP4Q9UKK3 1724 aaKnown RBP-3.44□□□□□ -2.96
SMC4-207ENST00000467263 FREM2Q5SZK8 3169 aa-3.45□□□□□ -2.96
SMC4-207ENST00000467263 MMP24-AS1A0A0U1RRL7 71 aa-3.45□□□□□ -2.96
SMC4-207ENST00000467263 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.45□□□□□ -2.96
SMC4-207ENST00000467263 TOGARAM1Q9Y4F4 1720 aa-3.45□□□□□ -2.96
SMC4-207ENST00000467263 CCNB3Q8WWL7 1395 aa-3.46□□□□□ -2.96
SMC4-207ENST00000467263 CCDC88BA6NC98 1476 aa-3.47□□□□□ -2.96
SMC4-207ENST00000467263 PIK3C2BO00750 1634 aa-3.47□□□□□ -2.96
SMC4-207ENST00000467263 DEFB4AO15263 64 aa-3.47□□□□□ -2.96
SMC4-207ENST00000467263 PRUNE2Q8WUY3 3088 aa-3.48□□□□□ -2.97
SMC4-207ENST00000467263 PYY3Q5JQD4 70 aa-3.5□□□□□ -2.97
SMC4-207ENST00000467263 S100A16Q96FQ6 103 aaKnown RBP-3.51□□□□□ -2.97
SMC4-207ENST00000467263 DEFB131BA0A096LNP1 70 aa-3.52□□□□□ -2.97
SMC4-207ENST00000467263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.53□□□□□ -2.97
SMC4-207ENST00000467263 WT1-ASQ06250 92 aa-3.53□□□□□ -2.97
SMC4-207ENST00000467263 NREPQ16612 68 aa-3.53□□□□□ -2.97
SMC4-207ENST00000467263 THOC2Q8NI27 1593 aaKnown RBP-3.54□□□□□ -2.98
SMC4-207ENST00000467263 ZC3H13Q5T200 1668 aaKnown RBP-3.54□□□□□ -2.98
SMC4-207ENST00000467263 ITSN2Q9NZM3 1697 aa-3.54□□□□□ -2.98
SMC4-207ENST00000467263 IGLV5-48A0A075B6I7 105 aa-3.54□□□□□ -2.98
SMC4-207ENST00000467263 PKIAP61925 76 aa-3.54□□□□□ -2.98
SMC4-207ENST00000467263 KIAA0586Q9BVV6 1533 aa-3.55□□□□□ -2.98
SMC4-207ENST00000467263 MYO15AQ9UKN7 3530 aa-3.56□□□□□ -2.98
SMC4-207ENST00000467263 VPS8Q8N3P4 1428 aa-3.56□□□□□ -2.98
SMC4-207ENST00000467263 TJP1Q07157 1748 aa-3.56□□□□□ -2.98
SMC4-207ENST00000467263 RICTORQ6R327 1708 aa-3.56□□□□□ -2.98
SMC4-207ENST00000467263 MT1FP04733 61 aa-3.58□□□□□ -2.98
SMC4-207ENST00000467263 KIF14Q15058 1648 aa-3.59□□□□□ -2.98
SMC4-207ENST00000467263 MRPL33O75394 65 aaKnown RBP-3.6□□□□□ -2.99
SMC4-207ENST00000467263 CFAP43Q8NDM7 1665 aa-3.61□□□□□ -2.99
SMC4-207ENST00000467263 S100A8P05109 93 aa-3.62□□□□□ -2.99
SMC4-207ENST00000467263 MAP3K4Q9Y6R4 1608 aa-3.62□□□□□ -2.99
SMC4-207ENST00000467263 PEG3Q9GZU2 1588 aa-3.63□□□□□ -2.99
SMC4-207ENST00000467263 LINC01546A6NGU7 62 aa-3.63□□□□□ -2.99
SMC4-207ENST00000467263 KIF1AQ12756 1690 aa-3.63□□□□□ -2.99
SMC4-207ENST00000467263 Q9H521 79 aa-3.65□□□□□ -2.99
SMC4-207ENST00000467263 LY75O60449 1722 aa-3.65□□□□□ -2.99
SMC4-207ENST00000467263 RPS27P42677 84 aaKnown RBP-3.66□□□□□ -3
SMC4-207ENST00000467263 CRIP1P50238 77 aa-3.66□□□□□ -3
SMC4-207ENST00000467263 RPS27LQ71UM5 84 aaKnown RBP-3.66□□□□□ -3
SMC4-207ENST00000467263 PPLO60437 1756 aa-3.66□□□□□ -3
SMC4-207ENST00000467263 PVALEFA0A1B0GWK0 134 aa-3.67□□□□□ -3
SMC4-207ENST00000467263 ATP5EP2Q5VTU8 51 aa-3.67□□□□□ -3
SMC4-207ENST00000467263 ABCC3O15438 1527 aa-3.67□□□□□ -3
SMC4-207ENST00000467263 RPS29P62273 56 aaKnown RBP-3.68□□□□□ -3
SMC4-207ENST00000467263 CRYBG3Q68DQ2 2970 aa-3.69□□□□□ -3
SMC4-207ENST00000467263 A0A087WXM4 84 aa-3.69□□□□□ -3
SMC4-207ENST00000467263 NRAPQ86VF7 1730 aa-3.7□□□□□ -3
SMC4-207ENST00000467263 KANTRA0A1W2PQU2 76 aa-3.7□□□□□ -3
SMC4-207ENST00000467263 RNF17Q9BXT8 1623 aaKnown RBP-3.7□□□□□ -3
SMC4-207ENST00000467263 ARHGAP35Q9NRY4 1499 aa-3.71□□□□□ -3
SMC4-207ENST00000467263 HMGA1P17096 107 aaKnown RBP-3.71□□□□□ -3
SMC4-207ENST00000467263 KCNQ1DNQ9H478 68 aa-3.71□□□□□ -3
SMC4-207ENST00000467263 HFM1A2PYH4 1435 aa-3.71□□□□□ -3
SMC4-207ENST00000467263 SPEGQ15772 3267 aa-3.71□□□□□ -3
SMC4-207ENST00000467263 CFAP54Q96N23 3096 aa-3.72□□□□□ -3
SMC4-207ENST00000467263 BVES-AS1Q5T3Y7 98 aa-3.72□□□□□ -3
SMC4-207ENST00000467263 MINOS1Q5TGZ0 78 aa-3.72□□□□□ -3
SMC4-207ENST00000467263 UBL5Q9BZL1 73 aa-3.72□□□□□ -3
SMC4-207ENST00000467263 DMDP11532 3685 aa-3.73□□□□□ -3.01
SMC4-207ENST00000467263 CENPEQ02224 2701 aa-3.74□□□□□ -3.01
SMC4-207ENST00000467263 V9GYS6 101 aa-3.75□□□□□ -3.01
SMC4-207ENST00000467263 SMIM13P0DJ93 91 aa-3.76□□□□□ -3.01
SMC4-207ENST00000467263 WDFY3Q8IZQ1 3526 aa-3.77□□□□□ -3.01
SMC4-207ENST00000467263 LRRIQ1Q96JM4 1722 aa-3.78□□□□□ -3.01
SMC4-207ENST00000467263 NOP10Q9NPE3 64 aaKnown RBP-3.78□□□□□ -3.01
SMC4-207ENST00000467263 MAST1Q9Y2H9 1570 aa-3.78□□□□□ -3.01
SMC4-207ENST00000467263 RALGAPBQ86X10 1494 aa-3.79□□□□□ -3.02
SMC4-207ENST00000467263 H3BUA1 57 aa-3.8□□□□□ -3.02
SMC4-207ENST00000467263 TDRG1Q3Y452 100 aa-3.8□□□□□ -3.02
SMC4-207ENST00000467263 INO80Q9ULG1 1556 aaPredicted RBP-3.8□□□□□ -3.02
SMC4-207ENST00000467263 KDM5DQ9BY66 1539 aa-3.81□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms