RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 UQCR11O14957 56 aa5.56□□□□□ -1.52
HPS4-208ENST00000464362 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
HPS4-208ENST00000464362 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
HPS4-208ENST00000464362 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
HPS4-208ENST00000464362 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
HPS4-208ENST00000464362 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
HPS4-208ENST00000464362 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
HPS4-208ENST00000464362 Q75L30 129 aa5.54□□□□□ -1.52
HPS4-208ENST00000464362 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
HPS4-208ENST00000464362 TENM2Q9NT68 2774 aa5.53□□□□□ -1.52
HPS4-208ENST00000464362 KRTAP11-1Q8IUC1 163 aa5.52□□□□□ -1.53
HPS4-208ENST00000464362 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
HPS4-208ENST00000464362 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
HPS4-208ENST00000464362 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
HPS4-208ENST00000464362 TGP01266 2768 aa5.5□□□□□ -1.53
HPS4-208ENST00000464362 HRES1P13985 223 aa5.5□□□□□ -1.53
HPS4-208ENST00000464362 CMYA5Q8N3K9 4069 aa5.49□□□□□ -1.53
HPS4-208ENST00000464362 SPRR1BP22528 89 aa5.47□□□□□ -1.53
HPS4-208ENST00000464362 ANK2Q01484 3957 aa5.46□□□□□ -1.54
HPS4-208ENST00000464362 A0A087X002 238 aa5.45□□□□□ -1.54
HPS4-208ENST00000464362 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
HPS4-208ENST00000464362 SPINK7P58062 85 aa5.45□□□□□ -1.54
HPS4-208ENST00000464362 SRRM2Q9UQ35 2752 aaKnown RBP5.44□□□□□ -1.54
HPS4-208ENST00000464362 CSAG1Q6PB30 78 aa5.43□□□□□ -1.54
HPS4-208ENST00000464362 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
HPS4-208ENST00000464362 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
HPS4-208ENST00000464362 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
HPS4-208ENST00000464362 A8MU10 97 aa5.43□□□□□ -1.54
HPS4-208ENST00000464362 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
HPS4-208ENST00000464362 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
HPS4-208ENST00000464362 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
HPS4-208ENST00000464362 Q5W150 140 aa5.4□□□□□ -1.54
HPS4-208ENST00000464362 A0A0D9SG42 100 aa5.4□□□□□ -1.54
HPS4-208ENST00000464362 A6NN06 94 aa5.38□□□□□ -1.55
HPS4-208ENST00000464362 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
HPS4-208ENST00000464362 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
HPS4-208ENST00000464362 CRIPTQ9P021 101 aa5.31□□□□□ -1.56
HPS4-208ENST00000464362 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
HPS4-208ENST00000464362 LINC00483Q53H64 154 aa5.3□□□□□ -1.56
HPS4-208ENST00000464362 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
HPS4-208ENST00000464362 Q6ZR54 194 aa5.29□□□□□ -1.56
HPS4-208ENST00000464362 J3QL48 77 aa5.28□□□□□ -1.56
HPS4-208ENST00000464362 LCE6AA0A183 80 aa5.28□□□□□ -1.56
HPS4-208ENST00000464362 A0A1B0GU33 70 aa5.28□□□□□ -1.56
HPS4-208ENST00000464362 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
HPS4-208ENST00000464362 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
HPS4-208ENST00000464362 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
HPS4-208ENST00000464362 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
HPS4-208ENST00000464362 KRTAP13-2Q52LG2 175 aa5.2□□□□□ -1.58
HPS4-208ENST00000464362 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
HPS4-208ENST00000464362 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
HPS4-208ENST00000464362 COL7A1Q02388 2944 aa5.17□□□□□ -1.58
HPS4-208ENST00000464362 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
HPS4-208ENST00000464362 A0A0A0MQY5 61 aa5.15□□□□□ -1.58
HPS4-208ENST00000464362 LYSTQ99698 3801 aa5.14□□□□□ -1.59
HPS4-208ENST00000464362 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
HPS4-208ENST00000464362 Q6ZSA8 131 aa5.13□□□□□ -1.59
HPS4-208ENST00000464362 ROMO1P60602 79 aa5.12□□□□□ -1.59
HPS4-208ENST00000464362 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
HPS4-208ENST00000464362 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
HPS4-208ENST00000464362 MEGF8Q7Z7M0 2845 aa5.1□□□□□ -1.59
HPS4-208ENST00000464362 NDUFAF8A1L188 74 aa5.09□□□□□ -1.6
HPS4-208ENST00000464362 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.6
HPS4-208ENST00000464362 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
HPS4-208ENST00000464362 Q5VSD8 79 aa5.07□□□□□ -1.6
HPS4-208ENST00000464362 DNAH7Q8WXX0 4024 aa5.07□□□□□ -1.6
HPS4-208ENST00000464362 S4R3F8 94 aa5.07□□□□□ -1.6
HPS4-208ENST00000464362 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
HPS4-208ENST00000464362 HUWE1Q7Z6Z7 4374 aaKnown RBP5.05□□□□□ -1.6
HPS4-208ENST00000464362 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
HPS4-208ENST00000464362 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
HPS4-208ENST00000464362 DNAH9Q9NYC9 4486 aa5.02□□□□□ -1.61
HPS4-208ENST00000464362 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
HPS4-208ENST00000464362 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
HPS4-208ENST00000464362 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
HPS4-208ENST00000464362 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
HPS4-208ENST00000464362 R4GN34 69 aa4.98□□□□□ -1.61
HPS4-208ENST00000464362 A8MUU9 505 aa4.95□□□□□ -1.62
HPS4-208ENST00000464362 M0QZ58 72 aa4.94□□□□□ -1.62
HPS4-208ENST00000464362 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
HPS4-208ENST00000464362 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
HPS4-208ENST00000464362 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
HPS4-208ENST00000464362 PLECQ15149 4684 aaKnown RBP4.89□□□□□ -1.63
HPS4-208ENST00000464362 M0R2T5 61 aa4.87□□□□□ -1.63
HPS4-208ENST00000464362 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
HPS4-208ENST00000464362 KMT2AQ03164 3969 aa4.86□□□□□ -1.63
HPS4-208ENST00000464362 H0YAA0 97 aa4.85□□□□□ -1.63
HPS4-208ENST00000464362 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
HPS4-208ENST00000464362 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
HPS4-208ENST00000464362 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
HPS4-208ENST00000464362 DNAH2Q9P225 4427 aa4.82□□□□□ -1.64
HPS4-208ENST00000464362 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
HPS4-208ENST00000464362 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
HPS4-208ENST00000464362 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
HPS4-208ENST00000464362 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
HPS4-208ENST00000464362 XP32Q5T750 250 aa4.75□□□□□ -1.65
HPS4-208ENST00000464362 DNAH6Q9C0G6 4158 aa4.73□□□□□ -1.65
HPS4-208ENST00000464362 P0C880 135 aa4.73□□□□□ -1.65
HPS4-208ENST00000464362 PKD1P98161 4303 aa4.71□□□□□ -1.66
HPS4-208ENST00000464362 FAT2Q9NYQ8 4349 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms