RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ETDBQ3ZM63 59 aa4.07□□□□□ -1.76
HDAC9-216ENST00000446646 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
HDAC9-216ENST00000446646 TTTY13Q9BZ97 58 aa4.07□□□□□ -1.76
HDAC9-216ENST00000446646 KCNQ1DNQ9H478 68 aa4.07□□□□□ -1.76
HDAC9-216ENST00000446646 NEBP20929 6669 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 TCL1BO95988 128 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 PRLHP81277 87 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 LITAFQ99732 161 aa4.06□□□□□ -1.76
HDAC9-216ENST00000446646 A0A087X002 238 aa4.05□□□□□ -1.76
HDAC9-216ENST00000446646 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
HDAC9-216ENST00000446646 COX8AP10176 69 aa4.05□□□□□ -1.76
HDAC9-216ENST00000446646 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
HDAC9-216ENST00000446646 Q8NDZ9 215 aa4.05□□□□□ -1.76
HDAC9-216ENST00000446646 HIGD2AQ9BW72 106 aa4.05□□□□□ -1.76
HDAC9-216ENST00000446646 IGLV7-46A0A075B6I9 117 aa4.04□□□□□ -1.76
HDAC9-216ENST00000446646 IGLV6-57P01721 117 aa4.04□□□□□ -1.76
HDAC9-216ENST00000446646 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
HDAC9-216ENST00000446646 SPRR1AP35321 89 aa4.03□□□□□ -1.76
HDAC9-216ENST00000446646 Q6ZRX8 168 aa4.03□□□□□ -1.76
HDAC9-216ENST00000446646 KRTAP13-1Q8IUC0 172 aa4.03□□□□□ -1.76
HDAC9-216ENST00000446646 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
HDAC9-216ENST00000446646 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
HDAC9-216ENST00000446646 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-216ENST00000446646 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
HDAC9-216ENST00000446646 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
HDAC9-216ENST00000446646 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
HDAC9-216ENST00000446646 hADV29S1A0JD25 119 aa4.01□□□□□ -1.77
HDAC9-216ENST00000446646 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
HDAC9-216ENST00000446646 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
HDAC9-216ENST00000446646 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
HDAC9-216ENST00000446646 SLC25A20O43772 301 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 COX7BP24311 80 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 CEND1Q8N111 149 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 SERP2Q8N6R1 65 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 OCR1Q9BZK8 76 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 PRO0461Q9UI25 63 aa4□□□□□ -1.77
HDAC9-216ENST00000446646 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
HDAC9-216ENST00000446646 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
HDAC9-216ENST00000446646 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
HDAC9-216ENST00000446646 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
HDAC9-216ENST00000446646 SMCR5Q8TEV8 140 aa3.99□□□□□ -1.77
HDAC9-216ENST00000446646 SPRR4Q96PI1 79 aa3.99□□□□□ -1.77
HDAC9-216ENST00000446646 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
HDAC9-216ENST00000446646 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
HDAC9-216ENST00000446646 KRTAP13-2Q52LG2 175 aa3.98□□□□□ -1.77
HDAC9-216ENST00000446646 A0A0B4J2C4 111 aa3.97□□□□□ -1.77
HDAC9-216ENST00000446646 NDUFC1O43677 76 aa3.97□□□□□ -1.77
HDAC9-216ENST00000446646 ACYP1P07311 99 aa3.97□□□□□ -1.77
HDAC9-216ENST00000446646 Q1RN00 199 aa3.97□□□□□ -1.77
HDAC9-216ENST00000446646 KRTAP13-3Q3SY46 172 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 CLEC2BQ92478 149 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 Q9BRP9 147 aa3.96□□□□□ -1.78
HDAC9-216ENST00000446646 SPAG11AQ6PDA7 123 aa3.95□□□□□ -1.78
HDAC9-216ENST00000446646 C2orf91Q6ZV80 131 aa3.95□□□□□ -1.78
HDAC9-216ENST00000446646 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
HDAC9-216ENST00000446646 F8WEM9 126 aa3.94□□□□□ -1.78
HDAC9-216ENST00000446646 H7C2G1 150 aa3.94□□□□□ -1.78
HDAC9-216ENST00000446646 CCKP06307 115 aa3.94□□□□□ -1.78
HDAC9-216ENST00000446646 Q8NBF4 154 aa3.94□□□□□ -1.78
HDAC9-216ENST00000446646 TEX49A0A1B0GTD5 131 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 H0YGX0 51 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 ERC2-IT1O76042 136 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 COX6CP09669 75 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 CFC1P0CG37 223 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 MOBPQ13875 183 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 SSBP3-AS1Q7Z2R9 100 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 PRO1854Q9UHT4 67 aa3.93□□□□□ -1.78
HDAC9-216ENST00000446646 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
HDAC9-216ENST00000446646 A6NN06 94 aa3.92□□□□□ -1.78
HDAC9-216ENST00000446646 K7ERS5 55 aa3.92□□□□□ -1.78
HDAC9-216ENST00000446646 SPRR1BP22528 89 aa3.92□□□□□ -1.78
HDAC9-216ENST00000446646 DEFB105AQ8NG35 78 aa3.92□□□□□ -1.78
HDAC9-216ENST00000446646 DNAL4O96015 105 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 SPINK1P00995 79 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 FXYD2P54710 66 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 RBM3P98179 157 aaKnown RBP3.91□□□□□ -1.78
HDAC9-216ENST00000446646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.91□□□□□ -1.78
HDAC9-216ENST00000446646 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 SMIM29Q86T20 159 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 LINC00643Q86TS7 51 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 ST20-AS1Q8NBB2 130 aa3.91□□□□□ -1.78
HDAC9-216ENST00000446646 M0R2T5 61 aa3.9□□□□□ -1.79
HDAC9-216ENST00000446646 RPS29P62273 56 aaKnown RBP3.9□□□□□ -1.79
HDAC9-216ENST00000446646 Q1T7F1 81 aa3.9□□□□□ -1.79
HDAC9-216ENST00000446646 Q6ZQY7 126 aa3.9□□□□□ -1.79
HDAC9-216ENST00000446646 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
HDAC9-216ENST00000446646 IGLV5-48A0A075B6I7 105 aa3.89□□□□□ -1.79
HDAC9-216ENST00000446646 H3BQ85 93 aa3.89□□□□□ -1.79
HDAC9-216ENST00000446646 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
HDAC9-216ENST00000446646 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
HDAC9-216ENST00000446646 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
HDAC9-216ENST00000446646 Q6JHZ5 121 aa3.87□□□□□ -1.79
HDAC9-216ENST00000446646 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
HDAC9-216ENST00000446646 Q8N377 158 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms