RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 STARD9Q9P2P6 4700 aa5.89□□□□□ -1.47
CDRT1-204ENST00000395906 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
CDRT1-204ENST00000395906 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
CDRT1-204ENST00000395906 P0C880 135 aa5.87□□□□□ -1.47
CDRT1-204ENST00000395906 TLX1NBP0CAT3 122 aa5.87□□□□□ -1.47
CDRT1-204ENST00000395906 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
CDRT1-204ENST00000395906 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
CDRT1-204ENST00000395906 KMT2AQ03164 3969 aa5.85□□□□□ -1.47
CDRT1-204ENST00000395906 DNAH1Q9P2D7 4330 aa5.85□□□□□ -1.47
CDRT1-204ENST00000395906 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
CDRT1-204ENST00000395906 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
CDRT1-204ENST00000395906 IGLV5-52A0A0A0MRZ9 124 aa5.81□□□□□ -1.48
CDRT1-204ENST00000395906 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
CDRT1-204ENST00000395906 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
CDRT1-204ENST00000395906 A8MUU9 505 aa5.79□□□□□ -1.48
CDRT1-204ENST00000395906 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
CDRT1-204ENST00000395906 SPRR1BP22528 89 aa5.77□□□□□ -1.49
CDRT1-204ENST00000395906 Q96NJ1 140 aa5.77□□□□□ -1.49
CDRT1-204ENST00000395906 PRLHP81277 87 aa5.77□□□□□ -1.49
CDRT1-204ENST00000395906 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
CDRT1-204ENST00000395906 DYNC2H1Q8NCM8 4307 aaKnown RBP5.76□□□□□ -1.49
CDRT1-204ENST00000395906 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
CDRT1-204ENST00000395906 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
CDRT1-204ENST00000395906 DNAH2Q9P225 4427 aa5.74□□□□□ -1.49
CDRT1-204ENST00000395906 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
CDRT1-204ENST00000395906 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
CDRT1-204ENST00000395906 CDK2AP2O75956 126 aa5.72□□□□□ -1.49
CDRT1-204ENST00000395906 Q5W150 140 aa5.72□□□□□ -1.49
CDRT1-204ENST00000395906 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.49
CDRT1-204ENST00000395906 DNAH10OSP0CZ25 163 aa5.71□□□□□ -1.5
CDRT1-204ENST00000395906 FRAS1Q86XX4 4008 aa5.7□□□□□ -1.5
CDRT1-204ENST00000395906 A0A096LNI7 61 aa5.69□□□□□ -1.5
CDRT1-204ENST00000395906 H3BNG1 76 aa5.67□□□□□ -1.5
CDRT1-204ENST00000395906 LINC01556Q5JQF7 62 aa5.67□□□□□ -1.5
CDRT1-204ENST00000395906 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
CDRT1-204ENST00000395906 CASC10Q5T4H9 136 aa5.65□□□□□ -1.5
CDRT1-204ENST00000395906 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
CDRT1-204ENST00000395906 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.51
CDRT1-204ENST00000395906 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
CDRT1-204ENST00000395906 UBE2DNLQ8IWF7 75 aa5.63□□□□□ -1.51
CDRT1-204ENST00000395906 APLNQ9ULZ1 77 aa5.63□□□□□ -1.51
CDRT1-204ENST00000395906 NUPR2A6NF83 97 aa5.63□□□□□ -1.51
CDRT1-204ENST00000395906 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
CDRT1-204ENST00000395906 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
CDRT1-204ENST00000395906 LY6G6CO95867 125 aa5.61□□□□□ -1.51
CDRT1-204ENST00000395906 HECTD4Q9Y4D8 3996 aa5.61□□□□□ -1.51
CDRT1-204ENST00000395906 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
CDRT1-204ENST00000395906 H0YAA0 97 aa5.61□□□□□ -1.51
CDRT1-204ENST00000395906 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
CDRT1-204ENST00000395906 A0A087WTM6 91 aa5.59□□□□□ -1.51
CDRT1-204ENST00000395906 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.52
CDRT1-204ENST00000395906 KRTAP11-1Q8IUC1 163 aa5.59□□□□□ -1.52
CDRT1-204ENST00000395906 CRIPTQ9P021 101 aa5.59□□□□□ -1.52
CDRT1-204ENST00000395906 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
CDRT1-204ENST00000395906 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
CDRT1-204ENST00000395906 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
CDRT1-204ENST00000395906 PANO1I0J062 215 aa5.57□□□□□ -1.52
CDRT1-204ENST00000395906 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
CDRT1-204ENST00000395906 Q6ZSA8 131 aa5.57□□□□□ -1.52
CDRT1-204ENST00000395906 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
CDRT1-204ENST00000395906 RYR3Q15413 4870 aa5.56□□□□□ -1.52
CDRT1-204ENST00000395906 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
CDRT1-204ENST00000395906 DNAH11Q96DT5 4516 aa5.55□□□□□ -1.52
CDRT1-204ENST00000395906 PSORS1C2Q9UIG4 136 aa5.54□□□□□ -1.52
CDRT1-204ENST00000395906 FAT2Q9NYQ8 4349 aa5.53□□□□□ -1.52
CDRT1-204ENST00000395906 DNAH17Q9UFH2 4485 aa5.53□□□□□ -1.52
CDRT1-204ENST00000395906 CHTF8P0CG12 524 aa5.53□□□□□ -1.52
CDRT1-204ENST00000395906 NBDYA0A0U1RRE5 68 aa5.52□□□□□ -1.53
CDRT1-204ENST00000395906 K7ERS5 55 aa5.52□□□□□ -1.53
CDRT1-204ENST00000395906 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
CDRT1-204ENST00000395906 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
CDRT1-204ENST00000395906 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
CDRT1-204ENST00000395906 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
CDRT1-204ENST00000395906 A0A1B0GU33 70 aa5.49□□□□□ -1.53
CDRT1-204ENST00000395906 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
CDRT1-204ENST00000395906 DNAH8Q96JB1 4490 aa5.48□□□□□ -1.53
CDRT1-204ENST00000395906 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
CDRT1-204ENST00000395906 PKD1P98161 4303 aa5.47□□□□□ -1.53
CDRT1-204ENST00000395906 SPINK1P00995 79 aa5.47□□□□□ -1.53
CDRT1-204ENST00000395906 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
CDRT1-204ENST00000395906 FLG2Q5D862 2391 aaPredicted RBP5.47□□□□□ -1.53
CDRT1-204ENST00000395906 Q6ZRN7 208 aaPredicted RBP5.46□□□□□ -1.54
CDRT1-204ENST00000395906 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
CDRT1-204ENST00000395906 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
CDRT1-204ENST00000395906 RYR2Q92736 4967 aa5.43□□□□□ -1.54
CDRT1-204ENST00000395906 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
CDRT1-204ENST00000395906 C14orf177Q52M58 125 aa5.42□□□□□ -1.54
CDRT1-204ENST00000395906 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
CDRT1-204ENST00000395906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
CDRT1-204ENST00000395906 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.55
CDRT1-204ENST00000395906 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
CDRT1-204ENST00000395906 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
CDRT1-204ENST00000395906 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
CDRT1-204ENST00000395906 FAT1Q14517 4588 aa5.36□□□□□ -1.55
CDRT1-204ENST00000395906 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.55
CDRT1-204ENST00000395906 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.56
CDRT1-204ENST00000395906 Q8N1X5 172 aa5.33□□□□□ -1.56
CDRT1-204ENST00000395906 SEC61BP60468 96 aaKnown RBP5.32□□□□□ -1.56
CDRT1-204ENST00000395906 CIRBP-AS1Q8TBR5 109 aa5.28□□□□□ -1.56
CDRT1-204ENST00000395906 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms